Mus musculus (house mouse): 73288
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Entry
73288 CDS
T01002
Symbol
Vps50, 1700034M03Rik, 8430415E05Rik, BLM, Ccdc132, mKIAA1861
Name
(RefSeq) VPS50 EARP/GARPII complex subunit
KO
K23288
syndetin
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
73288 (Vps50)
Membrane trafficking [BR:
mmu04131
]
Protein recycling
Others
EARP complex
73288 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
73288
NCBI-ProteinID:
NP_077222
MGI:
1920538
Ensembl:
ENSMUSG00000001376
UniProt:
Q8CI71
LinkDB
All DBs
Position
6:3498393..3603531
Genome browser
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLNDLGAFESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQSAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDIRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEETAAAAEG
SNVMSTEEATFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNHHRIRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFLEQSRSPSVSPSKQPSATSSKPVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQDYDSDSDVPEELKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLKTTLNRIQESLIDLEGSADPTATLTAAEERKEKVPSPHLNQLVILTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMMNVKWDVKEIMSQHNIYVDALLKEFEQFNKRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDEID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctcatgacccggcagggtctgaagagccctccggagagcctc
aatgatcttggtgcctttgagagccttcgggtccctggaaaggaggaattcagggagctt
cgagaacagccaagcgaccctcaagctgagcaagagttgattaatagcattgaacaagtc
tatttttctgcggatccatttgatattgttaaatatgagctggagaagcttcctcctgtt
ctcaatctgcaagagttagaggagtacagagacaaattaaagcaacaacaatctgcagtc
tctaaaaaagtggcagatttgattcttgaaaagcagcctgcttatgtaaaggaacttgaa
agagtcacatcactgcagacaggtcttcagttggctgctgtcatctgcacaaatgggagg
aggcacttgaatattgcaaaggaaggttttactcaggctagcttaggccttcttgcaaat
caaaggaagcgtcagttgctaattggacttctgaagtcgctgagaaccataaaaacattg
caaagaactgacatacgcttaagtgaaatgctggaggaagaggactatccaggagctatt
cagctgtgcctagaatgtcagaaggctgccagcacttttaaacactacagctgtataagt
gagctgaattcaaagctgcaagatactttggagcaaattgaggaacagttggatgtagct
ctttccaaaatctgcaagaattttgacattaaccattataccaaggttcagcaagcttac
cggcttcttggaaaaacacagactgcgatggatcagcttcatatgcacttcactcaagcc
attcacaacaccgtatttcaggttgtgcttggctatgtggagctgtgtgcaggaaacacg
gatacaaaattccagaagcttcagtataaagatctctgtacgcatgtgacaccagacagc
tatattccatgcctggcagacctgtgcaaagcactgtgggaagtcatgctcagctactac
agaaccatggagtggcacgagaaacatgacaatgaggaaacagctgcagctgctgaagga
agcaatgtgatgagtactgaggaggccacttttgaccgtggctatgtaaagaagaagtta
gagcacggccttacccggatatggcaggatgttcaactaaaagtaaaaacctacttgctt
ggaactgatttatctatattcaaatatgatgatttcatctttgttctggatattgtcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaggagtcc
attagaaaacaaagtgtcaattacttcaagaaccaccataggatacgacttgatgaactg
agaatgttcttagagaatgagacatgggagctttgccctgttaagtcaaattttagcatc
ttgcagcttcatgagtttaaattcctggaacagtctcgctccccatcagtttcacctagt
aagcagccatcagcaacttcttcaaagcctgtgactttgtttgagcagtactgcagtggt
gggaatccatttgaaatacaagccgaccacaaagatgaagaaactgaagatgtcttagcc
tctaatgggtatgagtctgatgagcaagagaagagcgcctatcaggactatgacagtgac
agcgacgtccctgaggagctgaagcgggattacgtggacgagcagaccggcgacgtgccc
gtgaagagtgtttcccgagagaccctgaagagcaggaagaagtcggattacagtctaaac
aaagtgaatgcacccatcttaacaaacacaacactgaatgtaataaggcttgttggaaag
tacatgcagatgatgaacatccttaagccaatcgccttcgatgtgatccatttcatgtct
cagctctttgactattacttgtatgccatatataccttttttggtcggaatgattcattg
gaatcaacaggacttggccttagtagtagcagactaaaaacaactctaaacagaattcaa
gaaagccttattgacctggagggctcagctgatccaactgccactctcacagcagccgag
gaaagaaaggagaaggtacccagcccacacctcaatcagctagtgattttgacatctggg
gatacattgtatgggttggcagagagagtggtagccacagaatccttagtgttcttggct
gagcagtttgagttccttcagccacatttggatgctgtgatgcctgcagtcaaaaagccc
ttcctgcagcagttttactcccagacagtctcaactgccagtgaactgcgcaagcccatt
tactggattgtggctggtaaagctattgattatgaacagatgcttctcctaatgatgaat
gtgaagtgggatgtcaaagagatcatgtcacagcacaacatctatgtagatgcattgctg
aaggaatttgagcagtttaacaagcggttaaatgaagtttctaagagagttcggatacct
ctgcctgtatcaaatatactttgggagcattgtatacgattagctaacagaactattgtg
gaaggatacgccaatgtcaagaaatgcagtaatgaggggcgtgccttgatgcaattggat
tttcaacagtttttaatgaaactcgaaaaactaactgacattagacctattcctgataaa
gaatttgtggaaacgtatatcaaagcctactacctaactgagaatgacatggagcgttgg
atcaaagagcacagggaatactcaacgaagcagttgaccaacctggtgaatgtttgccta
ggatctcatatcaataagaaagcaagacagaagctcctagcagctatagatgagatagac
aggcctaaaagataa
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