Mus musculus (house mouse): 74108
Help
Entry
74108 CDS
T01002
Symbol
Parn, 1200003I18Rik, DAN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform 2
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
74108 (Parn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
74108 (Parn)
Enzymes [BR:
mmu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
74108 (Parn)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
74108 (Parn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_R3HCC1L
RRM_Thc1
RRM_1
Motif
Other DBs
NCBI-GeneID:
74108
NCBI-ProteinID:
NP_001345381
MGI:
1921358
Ensembl:
ENSMUSG00000022685
LinkDB
All DBs
Position
16:complement(13355828..13486035)
Genome browser
AA seq
605 aa
AA seq
DB search
MEIIRSNFKINLHKVYQAIEEADFFAIDGEFSGISNGPSVTALTSGFDTPEERYQKLKKH
SMDFLLFQFGLCAFKYDHTDSKHVTKSFNFYVFPKPFSRSSPDVKFVCQSSSIDFLASQG
FDFNKVFCSGIPYLNQEEERQLREQFDEKRSQANGAGALAKCPVTIPEDQKKFIDQVIEK
IEDFLQSEEKRSLELDPCTGFQRKLIYQTLSWKYPKGIHVETLETDKKERHIVISKVDEE
ERKRREQEKYTKEQGKLVVGHNMLLDVMHTIHQFYCPLPADLNEFKEMAICVFPRLLDTK
LMASTQPFKDIINNTSLAELEKRLKETPFDPPKVESAEGFPSYDTASEQLHEAGYDAYIT
GLCFISMANYLGSLLSPPKMCVSARSKLIEPFFNKLFLMRVMDIPYLNLEGPDLQPKRDH
VLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNTSKYAESYRI
QTYAEYVGKKQKGKQVKRKWTEDSWKEVDRKRPHMQGPCYHSNSFTAAGMLGKRTLSPDP
REAALEDRESEEVSDSELEQTDSCTDPLPEGRKKSKKLKRMKKELSLAGSVSDSPAVLFE
VPDTW
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagataatccggagcaattttaagattaatcttcacaaagtgtaccaggccatagag
gaggctgacttcttcgccatcgatggggagttttcaggaatcagcaatggaccctcagta
acagcattaacaagtggttttgacaccccagaagagagatatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgtgcttttaagtatgaccacacagat
tccaagcatgtaacgaagtcatttaacttctatgttttccccaagcctttcagtaggtcc
tcaccagatgtcaagtttgtttgccagagctccagcattgacttcctggcgagccaagga
tttgactttaataaagtgttttgcagtgggattccatatctgaatcaggaagaagaaagg
cagctgagagagcaattcgatgaaaaacggtctcaagccaatggggcaggagctctggca
aaatgtcctgtgaccatccctgaggatcagaagaagtttattgaccaagtaatagagaag
atagaggatttcctacaaagtgaagagaagaggagcctggaacttgacccatgcactggg
ttccaaagaaaacttatttatcagactttgagttggaagtatcctaaaggcattcatgtt
gagacattagagactgacaagaaggaaagacatatagttatcagcaaggtggatgaagaa
gaacgcaaaaggagagagcaggagaagtacacaaaggagcaggggaagctggttgtggga
cacaacatgctcttggatgtcatgcatacgattcatcagttctactgccccctgcctgcg
gacctgaatgagtttaaggagatggcaatatgtgtcttccccagactcttggatactaag
ttgatggccagcacacagccttttaaggatatcattaacaacacatcccttgcagagttg
gaaaagcggttgaaagagacaccttttgaccctcccaaagttgaaagtgcagaaggcttt
ccaagctacgacacagcttctgagcagcttcatgaggcggggtacgatgcctacatcaca
gggctctgcttcatctccatggcaaattacttaggttctttactcagtcctccaaaaatg
tgtgtgtctgccagatcaaagctcattgaacccttttttaacaagttatttcttatgagg
gtcatggatattccctatttaaacttggaagggccagacttgcagcctaagcgggaccat
gttctccacgtgaccttccccaaagagtggaaaaccagcgacctgtaccagctcttcagc
gccttcggtaacattcagatatcctggattgatgatacatcagccttcgtttctctcagc
cagccagaacaagtacaaattgccgttaataccagcaagtacgctgaaagttatcggatc
cagacctatgctgagtatgtgggaaagaagcagaaaggcaagcaggtcaagaggaagtgg
acagaagacagttggaaggaggtggacagaaagcggccccacatgcagggcccctgttac
cacagcaacagcttcacagccgctggcatgcttggaaagaggacgctgagtcccgaccca
agggaagctgccttggaggacagagaatcagaggaggtatctgactcggagcttgaacag
acagattcctgtacagaccccctcccagagggaaggaaaaagtccaagaagttaaaacga
atgaagaaggagctttccttggcaggaagtgtctcggatagccctgccgtgctctttgaa
gtccctgacacatggtag
DBGET
integrated database retrieval system
