Mus musculus (house mouse): 74737
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Entry
74737 CDS
T01002
Symbol
Pcf11, 2500001H09Rik, 5730417B17Rik
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
74737 (Pcf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmu03021
]
74737 (Pcf11)
03019 Messenger RNA biogenesis [BR:
mmu03019
]
74737 (Pcf11)
Transcription machinery [BR:
mmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
74737 (Pcf11)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
74737 (Pcf11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
74737
NCBI-ProteinID:
NP_083354
MGI:
1919579
Ensembl:
ENSMUSG00000041328
UniProt:
G3X9Z4
LinkDB
All DBs
Position
7:complement(92292666..92319284)
Genome browser
AA seq
1553 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPDEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETANLGPGSVPSKLHVPQIPTMAVKTPHQVPVQPDKSRAGPSLQMQDLKGTNRDPRLN
RMSQHSSHGKEQSHRKEFVMNTINQSDIKTSKNVPSEKLNSSKQEKSKSGERITKKELDQ
LDSKSKSKSKSPSPLKNKLSHTKDLKNQDSESMRLSDMSKRDPRLKKHLQDKAEGKDEDV
KEKRKTAEKKEKDEHMKSSEHRVIGSRSKIINGIVQKQDMVTEELEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPNLAPKAGKMRQSGLKQSHMEEFPPPSR
EERNIKRSAKQDVRDPRRLKKMDEDRPQETAGQHSMKSGGDPKENIENWQSSKSAKRWKS
GWEENKSLQQGDEHSKPPHLRHRESWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGVREEQRSPFNDRFPLKRPRYED
SDKPFVDGPASRFAGLDTNQRLTALAEDRPLFDGPGRPSVTRDGPAKMIFEGPNKLSPRI
DGPPTPGSLRFDGSPGQMGGGGPMRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ
GGGGGFRFEGSPSLRFEGSTGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG
SLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGGGIRFEGPLLQQGVGMRFEG
PHGQSVAGLRFEGHNQLGGNLRFEGPHGQPGVGIRFEGPIVQQGGGMRFEGPVPGGGLRI
EGPLGQGGPRFEGCHSLRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQPGPQRFDGPPGQ
QVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRIESFNHSGPYNDPPGNTF
NVPSQGLQFQRHEQIFDTPQGPNFNGPHGPGNQNFPNPINRASGHYFDEKNLQSSQFGNF
GNLPTPISVGNIQASQQVLTGVAQPVAFGQGQQFLPVHPQNPGAFIQNPSGGLPKAYPDN
HLSQVDVNELFSKLLKTGILKLSQPDSATAQVTEAVAQPPPEEDEDQNEDQDVPDLTNFT
IEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVTHR
RWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGAVES
CEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCTPSPSKTPVENP
LNIMLNIVKNELQEPCESPKVKEEQIDAPPACSEESVATPTEIKTESDTVESV
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggcggaggccggggctgcgggggcccgggaggacgcctgtcgg
gattatcagtcgtcgctggaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttccagttatgtaccttatggattctatc
gtgaaaaatgttggaagagaatatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgaaatattccctttgaagaaactttatgccttggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctgcctcctaatgtgaatacatctagcatccat
gtgaatcccaaatttttaaataaatcgcctgatgagccttcaacacctggcacagtggtc
agttcccccagtatctccactcctcccattgtacctgatatacaaaagaatcttacccaa
gaacaactaataaggcaacagttactggcaaaacaaaaacagttgttagaacttcagcag
aaaaagctggagcttgagttagaacaagctaaggcacagctggcagtatctctgagtgtt
cagcaggaaacagccaacttgggtcctggatcagtgccgtctaaattacatgttccacaa
attcccacaatggctgttaaaactccccatcaggtccctgtacaacctgacaaaagccga
gcaggtccatccttacaaatgcaagacttgaaaggaactaaccgggatccccgtcttaac
aggatgagccaacattcttcccatggcaaagagcagagtcataggaaagaatttgtaatg
aacacaataaaccagtctgatattaaaacaagtaagaatgtaccctctgaaaagctaaat
tcatccaaacaagaaaaaagtaaatcaggtgaaagaataaccaagaaagaacttgaccag
ttagattctaaatccaaatctaagtctaaatcaccatcacctttgaaaaacaaattatcc
cacacaaaagacttgaaaaatcaagactctgaaagtatgaggttgtctgatatgagtaag
agagatccacgattaaagaagcatcttcaggataaagctgagggcaaagatgaagatgta
aaagaaaagagaaaaactgcagaaaagaaggagaaagatgagcacatgaaatcatctgaa
cacagggtgattggaagtagaagtaaaatcataaatggcattgtccaaaaacaagacatg
gttacagaggagttggaaaaacaggggacaaaaccagggagatcgagtactagaaagaga
tcaagatcaaggtcacctaagtctcggtcaccaattatacattccccaaagagaagagat
agacggtcacccaaacgaaggcaaagaagtatgtctcccaatttggcacccaaagctgga
aagatgcgtcagtcgggactaaaacagtcacatatggaagaattcccaccaccttccagg
gaagaaagaaatattaagagaagtgctaagcaggatgttagagatcccagacgactgaaa
aagatggatgaggaccggcctcaagaaactgcaggtcaacattctatgaagtcaggtggt
gacccaaaggagaatatagagaattggcaaagctctaagtctgccaaaagatggaaatct
ggctgggaagaaaataaaagcttgcagcagggtgatgaacatagtaaacctcctcatcta
aggcatagggagagctggtcaagcactaaagggatcttgtcacctcgagcccccaagcag
cagcaccgactaagtgtagatgccaatcttcaaattcctaaagagttaactcttgcaagc
aaaagagaattgcttcaaaagacgagcgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtgtacga
gaggagcagagatcaccattcaatgatcgttttccacttaagcgacctagatatgaagat
tcagataaaccatttgtagatggcccagcatcaagatttgctggccttgatacaaatcag
cgacttacagctctagctgaagaccgaccattatttgatggacctggtaggccatctgtg
acgagagatggcccagccaagatgatttttgaaggacctaataaattaagccctagaatt
gatggacctcctacaccaggttctcttcggtttgatgggtcaccaggacaaatgggggga
ggaggccctatgagatttgaaggaccacaaggtcagttaggaggtgggtgtcctttgaga
tttgaaggtcctccaggaccagtaggaacacctctgcggtttgaagggccaattggtcaa
ggaggaggaggtggttttcgatttgaaggttcacctagtttgaggtttgagggatctaca
ggtggtttacgatttgaaggaccagggggtcagcccgtgggtggtctcaggtttgaagga
catcgtggtcaacctgtgggtggtctcaggtttgaaggacctcatggacagcctgtgggc
agtcttagatttgataatcctcgaggtcagcctgtaggaggacttagatttgaagggggt
catggtccatcaggggctgcaattaggtttgatgggcctcatggtcagccaggtggtggt
ggtggtatcagatttgagggccctttgctacagcaaggagttggaatgaggtttgagggt
ccccatggtcagtctgtagctggtctgagatttgaaggacataatcaactaggtgggaac
cttaggtttgagggaccacatggtcaaccaggggttgggatcaggtttgaaggacctata
gttcaacaaggaggtggaatgaggtttgaaggtcctgtaccaggaggtggcctgagaatt
gaagggcctctgggtcaaggtggtcctagatttgaaggttgtcactctttaaggtttgat
ggacagccaggtcaaccatcacttttgccaagatttgatggattacatggccagccaggt
cctagatttgaaagaactggtcagccaggtccacagaggtttgatggaccacctggacag
caggttcaaccaagatttgatggtgtacctcaaagatttgatgggccacaacaccagcaa
gcatcaagatttgatattcctcttggtctacaaggaactcgatttgacaatcatccttca
caaaggattgaatctttcaatcattctggcccatataatgatccacctggcaatactttt
aatgttccatctcaaggattacagttccaaagacacgaacaaatatttgatacacctcaa
ggaccaaattttaatggaccacatggccctggaaatcagaatttcccaaatcccattaac
agagcttctggacactattttgatgaaaagaatcttcagagttctcagtttggaaacttt
ggcaatttgcctacaccaatatcagtaggaaatattcaggcatctcaacaggttcttact
ggtgttgctcagccagtagcgtttggccaaggacaacagttcttaccagttcatccacag
aatcctggagcttttattcaaaatccttcaggcggtcttcccaaggcatatcctgataat
catctcagtcaggtggatgtaaacgaattgttttcaaaactgctaaaaacaggaattctc
aaattgtcacagcctgattcagctacagcacaggtaaccgaggctgttgctcagcctccc
cctgaggaggacgaggatcagaatgaagatcaggatgttccagatcttaccaatttcacc
attgaagaattgaagcaacgttatgacagtgttataaaccggctgtacactgggattcaa
tgttactcgtgtggaatgaggttcacgacatcccagacagatgtttatgcagatcacttg
gattggcattatcggcaaaacagaaccgagaaagatgttagcagaaaagtcactcataga
cgttggtactacagtctaacagattggatagaatttgaagaaatagctgatctggaagaa
cgtgcaaaaagccagttttttgaaaaggttcatgaagaggttgtccttaaaactcaggag
gctgctaaagaaaaggagttccaaagtgtacctgctggaccagctggagcagttgagagt
tgtgaaatctgtcaagaacaatttgaacagtactgggatgaagaggaggaagaatggcac
ttaaaaaatgctattagagtagacggaaagatttaccatccatcatgttatgaagattat
caaaatacatcttcatttgattgcacaccatctcccagcaagacaccagttgaaaaccct
ttgaacattatgttgaacattgtcaaaaacgaattgcaagaaccctgtgaaagtcccaaa
gttaaggaagaacaaattgatgccccaccagcttgttcagaagaaagtgtagcaacaccc
actgaaattaaaacagaaagtgatacagttgagtcagtttaa
DBGET
integrated database retrieval system
