Mus musculus (house mouse): 78394
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Entry
78394 CDS
T01002
Symbol
Ddx52, 2700029C06Rik, ROK1
Name
(RefSeq) DExD box helicase 52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmu03009
]
78394 (Ddx52)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
78394 (Ddx52)
Ribosome biogenesis [BR:
mmu03009
]
Eukaryotic type
90S particles
Helicases
78394 (Ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
78394
NCBI-ProteinID:
NP_084372
MGI:
1925644
Ensembl:
ENSMUSG00000020677
UniProt:
Q8K301
Q3TKX4
LinkDB
All DBs
Position
11:83831659..83853914
Genome browser
AA seq
598 aa
AA seq
DB search
MDSYDLFRRLGAGAKFDVKRFSADATRFQVGKRKFDSESLEVLKGLDFFGNKKSVSDECG
ALQIHQEPPNEEKTQGVLLERSKEPKKKKRKKMTSEVPAQEDFDGGIQWTSSVEAKLQDE
KVSGEKKLTSGKLEHLRKEKVNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQN
ILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALV
ISPTRELASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYL
LKQDPPGIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYD
VEQWCKLNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFKPPVLVFV
QSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFK
GVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQAGCPVP
EYIKGFQKLLSKQKKKMIKKPLERESICTTPKYFLEQAKQKKVAGQNSKKKETLKEKS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggattcctacgacctgtttcgccggcttggagccggcgccaagttcgacgtgaagcgc
ttctcagcagacgctactcgattccaggtaggaaaaaggaaattcgattccgagtctttg
gaggtcctgaagggactagacttcttcggaaacaagaagtccgtctcagatgaatgtgga
gcattgcaaatacaccaggagcccccaaatgaggagaaaacacaaggggtcctgttggaa
aggagtaaggagcccaagaagaaaaagagaaagaagatgacttcagaagttcctgctcaa
gaagactttgacggtggtatccagtggacatcctctgtagaagcaaagcttcaagatgaa
aaagtcagtggagagaagaagttaacttcaggaaagttggaacatctcagaaaggaaaag
gtcaacttctttcggaacaagcacaagatacatgtccaaggaactgatcttcctgaccca
attgctacatttcagcaacttgaccaggaatataaaatcaattctagattgctccagaat
attctagacgcaggcttccaagtgcccacaccaattcagatgcaagccattccagttatg
ctgcatggtcgggaacttctggcttctgctccaaccggatctgggaagacgttggcattt
agcatccccattttaatgcagctgaaacaaccaacaaataaaggctttagagccctggtt
atatccccaacccgagaacttgcaagccagattcacagagaattaattaaaatatctgag
ggtacaggattcagaatacatatgatccacaaagctgcaatagcagctaagaaatttgga
cctaaatcatctaagaagtttgatatccttgtgactactccaaatcgactgatctacttg
ttgaagcaggatccaccagggattgacctaacaaatgtcgagtggctggtagtagatgaa
tcagacaaactgtttgaagatggcaaaactgggtttagagagcagctggcttccattttc
ctggcctgcacatcgcccaaggtcagaagagcaatgttcagcgcaacttttgcgtacgac
gttgaacagtggtgcaagctcaacctggacaacgtcgtttccgtgtccattggagcaagg
aattctgcagtcgaaactgttgaacaagagcttctctttgttggatctgagactggaaaa
cttctggccatgagagaacttgttaaaaagggtttcaagccacctgttcttgttttcgtt
cagtccattgaaagagctaaagaacttttccatgagctcatatatgaaggtattaatgtg
gatgtcattcatgcagaaagaacacagcagcagcgagataacacagtccacagcttcaga
gcaggaaaaatttgggttcttatttgtacagccttacttgcaagagggattgactttaaa
ggcgtaaacctggtcatcaattatgattttcccaccagctcagtggagtacatccatagg
ataggtcggactggaagagcagggaataggggaaaggctgttacatttttcactgaagat
gataaaccattactaagaagtgttgccaatgttatccagcaggctggttgtcctgtgccc
gaatacataaaaggtttccagaaactactaagcaaacaaaagaaaaaaatgattaagaag
ccgttggaaagggagagcatttgtacaactccaaagtacttcttagagcaagctaaacag
aaaaaggttgctggccaaaacagcaagaagaaagaaactctcaaagagaaaagttaa
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integrated database retrieval system
