Mus musculus (house mouse): 80743
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Entry
80743 CDS
T01002
Symbol
Vps16, 1810074M16Rik, mVPS16
Name
(RefSeq) VSP16 CORVET/HOPS core subunit
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04140
Autophagy - animal
mmu04148
Efferocytosis
mmu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
80743 (Vps16)
04148 Efferocytosis
80743 (Vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
80743 (Vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
80743 (Vps16)
Membrane trafficking [BR:
mmu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
80743 (Vps16)
Hops complex
80743 (Vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
ARC6
Motif
Other DBs
NCBI-GeneID:
80743
NCBI-ProteinID:
NP_001349580
MGI:
2136772
Ensembl:
ENSMUSG00000027411
LinkDB
All DBs
Position
2:130265744..130286189
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AA seq
547 aa
AA seq
DB search
MVVGNAPESIQFVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALL
LEAQKEYEKESQKADEYLREIQELGQLIQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCF
LDRFPPDSFVHMCQDLRVLNAIRDYHIGIPLTYTQYKQLTIQVLLDRLVLRRLYPLAIQI
CEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGC
GRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVLLHLKNELNRGDFFM
TLRNQPMALSLYRQFCKHQELDTLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQ
TAADAFYKAKNEFAAKATEDQMRLLRIQRRLEDELGGRFLDLSLHDTVTTLILGGHNKRA
EQLARDFRIPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKHEA
KKYASRVGPEQKVKALLLVGDVAQAAEVAIEHRNETELSLVLSHCTGATDGAIADKIQRA
RAQAQKK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgggcaatgcgcctgaaagcatccagtttgtgctcgatgaggactcctactta
gtgcctgagcttgatggggtccgcatcttctcccgaagcacccatgagttcctgcatgaa
gtcccagtggccagtgaagagatcttcaaaattgcctcaatggcccctggagcactgctg
ttagaggcccagaaggaatatgagaaagagagccagaaagcagatgagtacctgcgggag
atccaggaactgggccagctgatccaggctgtgcagcagtgcattgaggctgcaggacat
gagcaccagccagacatgcaaaagagtctgctcagggcggcttcatttggaaagtgtttc
cttgacagatttccacctgacagcttcgtgcacatgtgtcaggaccttcgagtgctcaat
gctattagagactaccacattgggatccctctcacctacacccaatacaagcagctcacc
atccaggtgctgctagacaggcttgtgttgcggaggctttatcccctggctatccagata
tgcgagtacctgcgccttcctgaagtccagggtgtcagcaggatcctagcccactgggcc
tgctacaaggtgcagcagaaagatgtctcagatgaagatgtagcacgggctattaatcag
aagctgggtgacacgcctggtgtttcatactctgacattgctgcgagggcctatggctgt
ggccgcactgaactggccattaagctgctggagtatgagccacgctcaggggagcaggta
cctcttctcctaaagatgaagaggagcaaactggcactgagcaaggctattgagagtgga
gacactgacctggtgttgctgcacctaaagaatgaactcaaccgaggagactttttcatg
actctccggaaccaacccatggccctgagtttgtatcgacagttctgtaagcatcaggag
ctagacactctgaaggacctttacaatcaggacgacaatcaccaggagttgggcagcttc
cacatcagagccagctatgccgctgaagagcgtattgaagggcgagtggcagctctgcag
acggcagctgatgccttctacaaagccaagaatgaatttgcagccaaggccacagaggat
caaatgaggctcctgcggatacagcgacgcctagaggatgagctagggggcaggttccta
gacctatctctacacgacactgtcaccactcttatccttggaggccacaacaagcgggca
gagcagctggcacgtgactttcgcatccctgataagagactatggtggttaaagctggct
gccctggcagatttggaagattgggaggagctggagaagttttccaaaagcaagaaatca
ccgattggttacctgccctttgtagagatctgcatgaaacagcataacaaacatgaggcc
aagaagtatgcttcccgtgtgggccctgaacaaaaggtcaaggctttgcttcttgttggg
gatgtggctcaggctgcagaggtggctattgagcaccggaatgaaacagagctgagcctc
gttttgtcccactgcactggagccacagatggggccatagctgacaagattcagcgggcc
agggcacaagcccagaagaagtga
DBGET
integrated database retrieval system