Mus musculus (house mouse): 81898
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Entry
81898 CDS
T01002
Symbol
Sf3b1, 155kDa, 2810001M05Rik, Prp10, SAP155, SF3b155, TA-8, Targ4
Name
(RefSeq) splicing factor 3b, subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
81898 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
81898 (Sf3b1)
03036 Chromosome and associated proteins [BR:
mmu03036
]
81898 (Sf3b1)
Spliceosome [BR:
mmu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
81898 (Sf3b1)
Complex B
81898 (Sf3b1)
Complex C
U2 SnRNP specific factors
81898 (Sf3b1)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
81898 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
81898
NCBI-ProteinID:
NP_112456
MGI:
1932339
Ensembl:
ENSMUSG00000025982
UniProt:
G5E866
Q3US00
Q8C839
Q8C2Y9
LinkDB
All DBs
Position
1:complement(55024328..55066660)
Genome browser
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatatcgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagcccaaggagtgggccttgattccacaggttattatgac
caagaaatttatggtggaagtgatagcagatttgctggatatgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatccacgagcttgctcggtcagaag
aagcctggatatcatgcccccgtggcgttgcttaatgatataccacagtcaacagagcag
tatgatccatttgctgagcatcgtcctccaaagattgccgatcgggaagatgaatacaaa
aagcataggcggaccatgataatttccccagagcgtcttgatccttttgcagatggaggg
aagactcccgatcctaaaatgaatgctagaacctacatggatgttatgcgagaacaacat
ttgactaaggaagagagagaaattaggcaacaactagcagaaaaagctaaagctggagaa
ctaaaagtcgtcaatggagcagcagcatcccagcctccctcaaaacgaaaacggcgctgg
gatcagaccgctgaccagactcctggtgccactcccaaaaagctatcgagttgggatcag
gcagagacccctgggcataccccatctttaagatgggatgagacaccgggtcgtgcaaaa
ggaagtgaaacacctggcgcaaccccaggctcaaaaatatgggaccctacaccgagtcat
acacctgcgggagctgctactcctgggcgaggcgacacaccaggccatgcaaccccgggc
catggtggtgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaacagaa
agagatactcctgggcatggaagtggatgggctgagactcctcgaacagatcgaggtgga
gactctattggtgaaacaccaactcctggagcaagtaaaagaaagtctcgttgggatgaa
acgccggcgagtcaaatgggtggaagcactcctgttctgactccaggaaaaacaccaatt
ggcacaccagccatgaacatggctaccccgactccaggtcacataatgagcatgacacct
gaacagcttcaggcgtggcggtgggagagagaaattgatgaacgaaaccgcccactttct
gatgaagaattagatgctatgttcccagaaggatataaggtacttccccctccagctggt
tatgttcctattcgaactccagctcgaaagctgacagcaactcctacacctttgggtggt
atgactggtttccacatgcaaactgaagacagaactatgaaaagtgtcaatgaccagcca
tctgggaatcttccatttttaaaacctgatgacattcagtactttgataaactattggtt
gatgtagatgaatcaacacttagtccagaagaacaaaaagaaagaaaaataatgaagttg
cttttaaaaattaagaatggtacacctccaatgagaaaggctgccttacgtcagattact
gataaagctcgagaatttggagctggaccactgtttaaccagattcttcctctgttgatg
tcccctacacttgaggatcaagagcgacatttacttgtgaaagttattgatagaatattg
tataaacttgatgacttggtgcggccgtatgtgcacaagattcttgtggttatcgagcca
ctgttgattgatgaagattactatgctagagtggaaggccgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatttctaccatgagacctgatatagataacatg
gatgaatatgtccgaaacacaacagctagagcttttgctgtcgtagcctctgccctgggc
atcccttctttattgcctttcttaaaagctgtgtgcaaaagcaagaagtcttggcaagcg
aggcacactggtattaagattgtacaacagatagccattctcatgggctgtgctatcttg
ccacatctcagaagtttggttgaaatcattgaacatggtctcgtggatgagcagcagaaa
gttcggaccatcagtgctctggccattgctgctttggctgaggcagcaactccttatggt
attgagtcttttgattctgtgctcaagcccctatggaagggtatccgccaacacagagga
aagggtctggctgctttcttgaaggctattgggtatcttattcctcttatggatgcagaa
tatgccaactactatactagagaagtgatgttaatcctcattcgagaatttcagtctcct
gatgaagaaatgaagaaaattgttttgaaggtggtgaaacagtgttgtggaactgatggt
gtagaagcaaactacattaaaacagagattcttccacctttctttaaacacttttggcaa
cacagaatggctttggatagaagaaattaccgacagttagttgatacaactgtggagttg
gcaaacaaagtaggtgcagcagagatcatatctaggattgttgatgatctgaaggatgaa
gctgagcagtacaggaaaatggtgatggaaacaattgagaaaattatgggtaatctaggc
gcagcagatattgaccataaacttgaggaacaactgattgatggtattctctatgctttc
caagaacagactacagaggattcagtaatgttgaatggctttggcacagtagttaatgct
cttggcaaacgagtcaaaccatacttgcctcagatctgtggtacagttttatggcgttta
aataacaaatcagcaaaagttaggcaacaagcagctgacttgatttctcgaactgctgtt
gttatgaagacttgtcaagaggaaaaactgatggggcacttgggtgtggtgctgtatgaa
tatttgggtgaagagtaccctgaagtattgggcagcattcttggagcactgaaggctatt
gtaaacgtaataggtatgcataagatgacaccaccaattaaagatctcctgcctagactc
acccccattttaaagaacagacatgaaaaagtacaagagaattgtattgatcttgttgga
cgcattgctgacaggggagctgaatatgtatctgcaagagaatggatgaggatttgcttt
gagcttttagagctcttaaaagctcacaaaaaagctattcgaagagctaccgtcaataca
tttggttatatcgcaaaggctattggccctcatgatgtattggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagggtttgtacgactgtagccatagccattgttgct
gaaacatgctcccccttcacagtactgcctgccttaatgaatgaatacagagttcctgaa
cttaatgtgcaaaatggagtgttaaaatcactctccttcttgtttgagtatatcggcgaa
atggggaaagactacatctatgctgtgacgcctttacttgaggatgcgttaatggacagg
gaccttgttcacagacagacagcgagtgcagtggtgcagcacatgtcacttggtgtttac
ggatttggctgtgaggattctctgaatcacttactgaactatgtgtggcctaatgtgttt
gagacatctccccatgtaatccaggcagttatgggagctctggagggcctgagggttgct
attggaccatgcagaatgttgcagtattgcttacagggtctgttccacccagctcggaaa
gtcagagacgtatattggaaaatttacaactccatctacattggctcccaggatgctctc
atagcacattacccacgaatctacaatgacgataagaacacctatattcgttacgaactt
gactatatcttgtaa
DBGET
integrated database retrieval system
