Mus musculus (house mouse): 83564
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Entry
83564 CDS
T01002
Symbol
Nlrp4c, Nalp-alpha, Nalp4c, Rnh2
Name
(RefSeq) NLR family, pyrin domain containing 4C
KO
K22265
NACHT, LRR and PYD domains-containing protein 4
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
83564 (Nlrp4c)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmu04054
]
83564 (Nlrp4c)
Membrane trafficking [BR:
mmu04131
]
Autophagy
Other autophagy associated proteins
Others
83564 (Nlrp4c)
Pattern recognition receptors [BR:
mmu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
83564 (Nlrp4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
PYRIN
NLRC4_HD2
NOD2_WH
LRR_6
AAA_16
nSTAND3
LacAB_rpiB
PIF1
AAA_30
LRR_4
Motif
Other DBs
NCBI-GeneID:
83564
NCBI-ProteinID:
NP_113566
MGI:
1890518
Ensembl:
ENSMUSG00000034690
UniProt:
Q3TKR3
LinkDB
All DBs
Position
7:6048160..6108148
Genome browser
AA seq
982 aa
AA seq
DB search
MASFFSDFGLMWYLEELNKKEFMKFKEFLKQEILQLRLKQISWTEVKKASREDLANLLLK
HYEEKKAWDMTFKIFQKMNRKDLMERAGREIAGHSKLYQAHLKKKLTHDYARKFNIKVQD
FSKQKFTQDDYDRFENFLISKVTAKKPHMVFLQGAAGIGKSLMLTKLMLAWSEGMVFQNK
FSYIFYFCCQDVKKMKRASLAELISKEWPKTSAPIEDILSQPEKLLFVIDNLEVMECDMS
ERESELCDTCTEKQPVRILLSSLLRRKMLPKSSFLISATPETFEKMEGRVECTNVKIVTG
FNESNIKMYFRSLFQDKTKTQEIFSLVKENQQLFTVCQVPVLCWMVATCLKKEIEKGRDL
VSVCRRTTSLYTTHIFNLFIPQSAQYPSKESQAQLQSLCSLAAEGMWTDTFVFGEEALRR
NGIMDSDIPTLLDVRILEKSKKSEKSYIFLHPSIQEVCAAIFYLLKSHMDHPSQDVKSIE
ALIFTFLKKVKVQWIFFGSFIFGLLHESEQKKLEAFFGHQLSQEIKRQLYQCLETISGNE
ELQEQVDGMKLFYCLFEMDDEAFLAQAMNCMEQINFVAKDYSDVIVAAHCLQHCSTLKKL
SLSTQNVLSEGQEHSYTEKLLMCWHHMCSVLISSKDIYILQVKNTNLNETASLVLYSHLM
YPSCTLKALVVNNVTFLCDNRLFFELIQNQCLQHLDLNLTFLSHGDVKLLCDVLSQEECN
IEKLMVAACNLSPDDCKVFASVLISSKMLKHLNLSSNNLDKGISSLSKALCHPDCVLKNL
VLVNCSLSEQCWDYLSEVLRRNKTLNHLDISSNDLKDEGLKVLCGALSLPDSVLKSLSVR
YCLITTSGCQDLAEVLRKNQNLRNLQVSNNKIEDAGVKLLCDAIKHPNCHLENIGLEACA
LTGACCEDLASAFTHCKTLWGINLQENALDHSGLIVLFEALKQQQCTLHVLGLRITDFDK
ETQELLMAEEEKNPHLSILSSV
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttttttttctgattttggccttatgtggtacttagaagagctaaacaagaaa
gaattcatgaagtttaaggaattcctcaaacaggagattttgcagttgagactgaaacag
atttcttggaccgaagtgaagaaggcatctcgtgaagaccttgccaacttactgttgaaa
cattatgaggagaagaaagcctgggatatgaccttcaaaatcttccagaagatgaatagg
aaggatctcatggagagggcaggaagagagattgctggacactcaaagttatatcaagct
catttgaagaagaagctgacccatgattatgccagaaagtttaacatcaaagttcaagat
ttctctaagcagaaatttacccaggatgactatgatcgttttgagaactttcttatatca
aaggtgactgcaaagaaaccacacatggtgttcctgcaaggagcagcgggaattggcaag
tcattgatgttgacaaaattaatgcttgcctggtcagaaggcatggtgtttcagaacaaa
ttctcctatatcttctacttctgctgtcaagatgtgaagaagatgaagagagcaagcctg
gcagaattgatctccaaagagtggcccaaaacctcagctcccatagaggatatcctatcc
caaccggagaaactcttatttgtcatcgacaacttggaagtgatggaatgtgatatgtct
gaacgggagtcggagctgtgtgatacctgcacggagaagcagccagtgcgtatcctgctg
agcagtttgctcaggaggaagatgctccccaaatcctctttcctcatctctgctacccca
gagacttttgagaaaatggagggcagggttgagtgcacaaatgtgaaaatagtaacagga
ttcaatgagagcaatattaagatgtatttccgcagcttgttccaagataagaccaaaaca
caggaaatcttcagtttggtgaaagaaaaccagcagctgttcactgtatgtcaggtccct
gtgctctgctggatggtggccacttgtctaaaaaaagagatagagaagggaagagacctg
gtctctgtctgccgacgtaccacttccctgtataccactcacatcttcaatttgttcatt
ccccaaagtgcccaatatccaagtaaggaaagccaagctcagcttcagagcttgtgttct
ctggccgctgagggtatgtggactgacacatttgtgtttggtgaggaggctctcagaaga
aatgggatcatggactccgacatccccacactgctggacgtaaggatccttgagaagagc
aagaaatctgaaaaatcttacattttcctccacccgtctatccaggaggtctgtgcagcc
atcttttatctgctaaagagccacatggaccaccctagccaggatgttaaaagtatagag
gcactcatatttacatttctaaagaaagtcaaagtacagtggattttttttggctctttc
atctttggccttttacatgaatcagaacaaaaaaagctagaggcattttttggccaccag
ttgtcccaggaaataaaacgtcagttgtatcagtgcctggaaaccataagtggcaacgaa
gagcttcaagaacaggtagatggcatgaagctgttttactgtctgtttgagatggacgat
gaagccttcttagcacaagcaatgaactgtatggaacagattaactttgtggctaaggat
tattctgatgttattgttgctgcccactgcttacaacactgttctacactgaagaaacta
tccttgtcaacccagaatgtcctgagtgaaggtcaagaacacagctatacggaaaagcta
ctcatgtgttggcatcatatgtgctctgtgctcataagcagtaaggacatctacatactc
caagtgaaaaacactaatctcaatgaaacagcctctttggtgttatatagtcatctgatg
taccccagctgcacccttaaagcacttgtggtaaataatgtgaccttcctatgtgataac
cgcctgttctttgagttgattcagaaccagtgtttgcagcacttggacctcaacctcaca
ttcctgtcccatggtgatgtgaaactgttgtgtgatgtcttgagccaggaagagtgcaac
atagaaaagctgatggtagcagcctgtaacctttcaccagatgactgcaaggtctttgcc
tccgttctgatcagcagcaagatgttaaagcatcttaatttgtcatctaacaacttggac
aaagggatatcctctctgtccaaggctttgtgccacccagactgcgttctgaagaacttg
gtgttagtcaactgctccctcagtgagcaatgttgggactacctttcggaagttcttagg
cggaacaaaacactgaaccacctagacatcagctccaatgacctgaaggatgaagggctg
aaggttctctgtggggctctgagtctcccagacagtgtcctgaagtcactaagtgtaaga
tattgtctcatcaccactagtggttgccaggacctggctgaagtcttgaggaagaaccag
aacctgaggaacctacaggtttcaaacaataaaatagaagatgctggtgtgaagctcctg
tgtgatgctataaaacatcccaactgccacttagagaatattggattggaagcctgcgca
ctaactggtgcctgctgtgaggaccttgcttctgcttttacccactgtaagaccctgtgg
ggaatcaacctgcaggagaacgccttggaccacagtggattgattgtactgtttgaggct
ctgaaacagcaacagtgtaccctgcatgtacttggacttcgaattactgactttgataag
gaaacccaggagctcctgatggctgaggaagagaaaaacccacacttgagcatcctaagc
agtgtgtaa
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