Mus musculus (house mouse): 83796
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Entry
83796 CDS
T01002
Symbol
Smarcd2, Baf60b
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03082
ATP-dependent chromatin remodeling
mmu04714
Thermogenesis
mmu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
83796 (Smarcd2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
83796 (Smarcd2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
83796 (Smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmu03021
]
83796 (Smarcd2)
03036 Chromosome and associated proteins [BR:
mmu03036
]
83796 (Smarcd2)
Transcription machinery [BR:
mmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
83796 (Smarcd2)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
83796 (Smarcd2)
PBAF complex
83796 (Smarcd2)
GBAF(ncBAF) complex
83796 (Smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
83796
NCBI-ProteinID:
NP_001123659
MGI:
1933621
Ensembl:
ENSMUSG00000078619
UniProt:
Q99JR8
Q3TXH6
LinkDB
All DBs
Position
11:complement(106153997..106163810)
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AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPSPALRGPGPSGGMGVPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKADGDNAGTAGTPGGTPAADKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccgtggcgcgggcgggttcccgctgcctccgctgagccccggcggcggcgcc
gttgccgcggcccttggtgcgccgcctccgcctgcgggacccggaatgctgcccagcccg
gcgctcaggggcccggggccttctggaggcatgggggtaccgggggccgccgccttccgc
cccatgggccccgctggccccgcggcgcagtaccagcgtcctggcatgtcaccaggaagc
aggatgcccatggctggcttgcaggtgggacctcctgccggttccccatttggcacagct
gctccgctccgacctggcatgccacctaccatgatggatccattccgaaaacgcctgctt
gtgcctcaggcccagcccccgatgcctgcccagcgccgagggttaaagaggaggaagatg
gcagataaggttctacctcagcgaatccgggagcttgtcccagagtctcaggcatacatg
gatcttttagctttcgagaggaagctggaccagaccatcgctcgcaagcggatggagatt
caagaggccatcaagaagcctctgacgcaaaagcgaaaacttcggatctatatttccaat
acattcagccccagcaaggcggatggagataatgcgggaactgcggggacccctggggga
accccggcagcagacaaggtggcctcctgggagcttcgagtagaggggaaactgctggat
gatcctagcaaacagaagaggaagttctcatcattctttaagagccttgtgattgagttg
gacaaggaactctatgggccggacaaccatctggtggagtggcatcggatgcccaccaca
caggaaacagatggctttcaggtgaaacggccaggagatctcaatgtcaagtgcaccctt
ctgctcatgctggatcatcagcctcctcagtataaactggacccccgcctggcgaggttg
ctgggagtgcacacacagaccagggcggcaatcatgcaggcactgtggctttacatcaaa
cacaaccagctgcaggacggccatgagcgcgagtacatcaactgcaatcgttacttccgc
cagatcttcagttgtggccgactccgtttctccgagattcccatgaagctggctggattg
ctgcagcatccagaccccattgttattaatcatgtcattagtgtggatcctaatgaccaa
aagaagacagcctgctatgacattgatgtagaggttgatgacccactgaaggcccagatg
agcaacttcctggcctctaccaccaaccagcaggagattgcttctcttgacgtcaagatc
catgagaccattgagtccatcaaccagctaaagacccagagggatttcatgctcagcttt
agcaccgagccccaggacttcatccaggagtggctccgttcccaacgccgagacctcaag
atcatcacagatgtgattggaaaccctgaggaggagagacgagctgctttctaccaccag
ccctgggctcaggaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaattcgcctgacctaa
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integrated database retrieval system
