Mus musculus (house mouse): 94213
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Entry
94213 CDS
T01002
Symbol
Ddx50, 4933429B04Rik, 8430408E17Rik, GU2, RH-II
Name
(RefSeq) DExD box helicase 50
KO
K13183
ATP-dependent RNA helicase DDX50 [EC:
5.6.2.7
]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
94213 (Ddx50)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
94213 (Ddx50)
Spliceosome [BR:
mmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
94213 (Ddx50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
94213
NCBI-ProteinID:
NP_444413
MGI:
2182303
Ensembl:
ENSMUSG00000020076
UniProt:
Q99MJ9
LinkDB
All DBs
Position
10:complement(62451571..62487260)
Genome browser
AA seq
734 aa
AA seq
DB search
MPGKLLWGDIMELEAPLEESESQRKERQKSDRRKSRHHSESEERTETRENGVTDDLDAPK
PKKAKMREKLNGDTKEGLRFSDEFSPSHKSRRKDLPNGDVDEYEKRSKRVSSSENSHKSS
DKAEETLTREQKEGAFSNFSISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQART
GTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACF
YGGTSYQSQINQIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQ
VEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVE
HLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIA
QSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAG
RTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVD
FFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESPEEIQDVSC
AWKELNRKLSSNAVSHVTRMCLLKGNMGVCFDVPTSESERLQAEWHDSDWILSVPAKLPE
IEEYYDGNTSSNPRQRSGWSGGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRRSGN
RNRSRSGGHKRNFD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggaaactcctctggggagacataatggagctcgaggcacccttggaagagtcc
gagagccagaggaaggagcggcaaaagagtgatagaaggaagtcaaggcaccattctgaa
tcagaggagagaacagaaacaagagaaaatggtgttacagatgacctggatgctcccaag
cccaaaaaagctaaaatgagagaaaagctaaatggagacaccaaagaaggacttagattt
tcagatgaattctccccatctcataagtcaagaagaaaagacctgccaaatggagatgtg
gatgagtatgagaaaaggtcaaagcgagtgtcatcctcagaaaactctcacaagtcaagc
gataaagcagaggagactctaacacgtgaacaaaaggaaggagccttctctaatttctcc
atttctgaggagaccataaagcttctgaaaggtcgaggggtaacatatctctttcctatt
caagttaaaacctttggtcctgtatatgaaggaaaagatttaattgctcaagcccggaca
ggaacaggaaagacattctcttttgccatacccttgattgaaaggctccaaagaaatcaa
gaaacaattaaaaaaagccgctcaccaaaggtactcgttttggctccaacaagggaattg
gcaaatcaagtagccaaagatttcaaagatataactagaaaactcagtgtggcgtgtttt
tatggtggaacatcatatcaaagccagattaatcaaattcggaatggtattgacatcctt
gttgggaccccagggcgtatcaaagaccatctgcaaagtggccgtttggatctttcaaag
ctacgccatgttgtgcttgatgaagtagatcaaatgttagatttaggttttgctgaacaa
gtcgaagatattattcatgaatcttacaaaactgattcggaagacaatcctcagacctta
cttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaatacatgaaatcc
agatacgaacaggttgaccttgttggaaaaatgactcaaaaagctgcaaccactgtggaa
catttggctatccagtgccattggtctcagagaccagcagttattggagatgtccttcag
gtctacagtgggtctgaagggagagctattatcttctgtgaaactaagaagaatgttact
gaaatggccatgaatccacacataaagcagaatgctcagtgtttgcatggagacattgca
cagtcacaaagagaaattaccttgaaaggcttcagagaaggtagttttaaagttttggta
gcaaccaatgtggctgctcgtggcttggacattcctgaggttgacctagtgattcagagt
tctcctccacaggatgttgaatcctatatccatcgctctggacgcacaggtagagctggc
cggacaggaatttgtgtatgtttttatcaaccaagggaaagaggtcaactgagatatgtg
gagcagaaagctggaattacttttaaacgtgtaggtgttccgtctacaatggatttagtt
aaatctaaaagcatggatgccatcaggtctctggcttctgtttcttatgctgctgttgat
tttttccgaccatcagctcaaagactgatagaagagaagggggcagtggatgcattggct
gcagcattagctcacatttctggtgcatcaagctttgaaccacgatctttgataacttct
gataaggggtttgtgaccatgactctggagagcccagaagaaatacaggatgtcagctgc
gcttggaaggaacttaacagaaagctcagtagtaatgctgtgtctcacgtaaccagaatg
tgcctcctgaaaggaaatatgggtgtttgctttgatgttcctacaagtgagtcagaaaga
ttacaggcagagtggcatgattcagactggatactctcagtgccagccaaattacctgaa
attgaagaatattatgatggaaacacatcatctaatcccagacagaggagcggctggtct
ggcggcaggtcaggccgttcaggacggtctggtggtcgatctggtggccgatcaggtaga
cagagtcgacagggaagtcggtcaggaagtcggcaagatggtagaagacgaagtgggaac
agaaatcgatcaagaagtgggggccataaacggaattttgactga
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