Mycolicibacterium mucogenicum: C1S78_012205
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Entry
C1S78_012205 CDS
T07324
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mmuc
Mycolicibacterium mucogenicum
Pathway
mmuc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmuc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C1S78_012205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmuc03021
]
C1S78_012205
Transcription machinery [BR:
mmuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C1S78_012205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Nop14
HTH_20
Mo25
Motif
Other DBs
NCBI-ProteinID:
QPG71627
UniProt:
A0A8H2JC55
LinkDB
All DBs
Position
complement(2504001..2505476)
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AA seq
491 aa
AA seq
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MAHAHATDVRKTERVAVVATKASETADEPVKRTTKTPAKKAAAKAPAKRAAKAPAKKAAA
KAPAKRAAKAATKPEDGGVADDVTDVDDLAVEPDEIDVDDADLELDDDLEADDVADDDDE
DDAEEGESEGEANTEGAKAAPKAADGDDADDTAEPSEKDKASGDFVWDEEESEALRQARK
DAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMSELMEKGEKLPAAQ
RRDMQWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDY
TKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPE
ELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQ
DQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHP
SRSQVLRDYLD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcacgcccacgccaccgatgtacgaaagaccgaaagggtggccgtggtagcgacc
aaagccagcgagacagccgacgagccggtgaagcgcaccaccaaaacccccgcgaagaag
gccgccgccaaggcgcccgccaagcgcgctgccaaggcacccgcgaagaaggccgccgcc
aaggcgcccgccaagcgcgcggcgaaggccgcgaccaagcctgaagacgggggcgtcgcc
gacgacgtgaccgacgtcgacgacctcgccgtcgaacccgacgagatcgacgtcgacgac
gccgacctggaactcgacgacgacctcgaggccgacgacgtcgccgacgatgacgacgag
gacgacgccgaagaaggcgagtccgagggcgaagccaacaccgaaggcgccaaggccgcg
ccgaaggccgccgacggcgacgacgccgacgacaccgccgagccgtccgagaaggacaag
gcctccggcgacttcgtctgggacgaggaagagtccgaggcgctgcggcaggcccgtaag
gacgccgaactcaccgcttccgccgactcggtgcgtgcctacctcaagcagatcggcaag
gtcgcgctgctcaacgccgaggaggaggtcgaactcgccaagcgcatcgaggccggcctc
tatgccacgcagctgatgtccgagctgatggagaagggcgagaagctgcccgccgcgcag
cgtcgcgacatgcagtggatctgccgcgacggcgaccgcgccaagaaccacctgctggaa
gccaacctgcgcctcgtggtgtcgctggccaagcgctacaccggccgcggcatggcgttc
ctggacctcatccaggaaggcaacctgggcctgatccgcgcggtcgagaagttcgactac
accaagggctacaagttctcgacgtacgccacctggtggatccgtcaggccatcacccgc
gccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaac
aagctcggccgcatccagcgtgagctgctgcaggacctgggtcgcgaacccacgcccgaa
gagctggccaaggaaatggacatcacgccggagaaggtgctggagatccagcagtacgcg
cgtgagcccatctcgctggaccagaccatcggtgacgagggcgacagccagctcggtgac
ttcatcgaggacagcgaagccgtcgtggccgtggacgccgtgtcgttcacgctgctgcag
gatcagctgcagtcggtgctggagaccctgtccgagcgcgaggccggcgtcgtccggctg
cgcttcggcctcaccgacggccagccgcgcacgctggacgagatcggccaggtctacggc
gtcacccgtgagcgcatccgccagatcgagtccaagaccatgagcaagctgcggcacccg
tcgcgctcgcaggtcctgcgcgactacctggactag
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