Mycolicibacterium mucogenicum: C1S78_012310
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Entry
C1S78_012310 CDS
T07324
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mmuc
Mycolicibacterium mucogenicum
Brite
KEGG Orthology (KO) [BR:
mmuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmuc03016
]
C1S78_012310
Enzymes [BR:
mmuc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C1S78_012310
Transfer RNA biogenesis [BR:
mmuc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C1S78_012310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QPG71647
UniProt:
A0A8H2PFN7
LinkDB
All DBs
Position
complement(2523124..2524359)
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AA seq
411 aa
AA seq
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MTDADPVETSDDDPDVTPLLAPADGVPAVAVYASDIARAGELLASGHGAFAIDAERASGF
RYSNRAYLIQIRRAGAGSVLIDPVSHGIDPLKALAPVAEVVNSDEWILHAADQDLPCLAE
LGMRPPSLYDTELGGRLAGYDRVNLAAMVQRLLGLGLKKGHGAADWSKRPLPADWLNYAA
LDVEVLLELRAAVAAELESQGKTEWAAQEFEYMRTVEPTPTRRDRWRRTSGIHKVRNGQA
LAAVRELWQTRDRIAQRRDIAPGRILPDSAIIAAAVANPDTIEKLTALPIFGGSRQKRSA
QVWLDALTRARAADPPASEPNNGLPPPARWSRRKPEAFERLEKCRAGLSELSERVSVPTE
NLLTPETVRRLCWDWQPLPDVAAAVDEFLAAAGARPWQRELCGPVLAAALG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgctgatccggtcgagacgtctgacgacgatcccgacgtcactcccctgctg
gcacccgccgacggcgtgcctgccgtcgccgtctatgcgagcgacatcgcccgcgccggc
gagctcctggcgtccgggcacggcgccttcgcgatcgatgccgagcgggcgtcgggcttc
cgctattccaaccgcgcgtacctgatccagattcgccgcgcgggtgccggttcggtcttg
atcgaccccgtcagccacggcatcgacccgctgaaggcgctggcgccggtggccgaggtc
gtgaattccgacgagtggattctgcacgcggccgaccaggatctgccgtgcctggccgaa
ctgggcatgaggccgccgtcgctgtacgacaccgaactgggcggacggctcgccggctac
gaccgggtgaacctcgccgccatggtgcagcggttgttggggctggggctgaagaagggc
cacggcgccgccgactggtccaagcgaccgctgcccgcggactggctgaactacgcggcg
ctggacgtcgaggtgctcctggagttgcgtgccgccgtggccgcggaactcgagtcgcaa
ggcaaaaccgaatgggccgcacaggaattcgagtacatgcggaccgtcgaacccaccccg
acccggcgcgaccgctggcggcggacctcgggtatccacaaggtccgcaacggccaggcg
ctggccgcggtgcgcgagctgtggcagacgcgcgaccggatcgcacagcggcgggacatc
gcgcccggccgcatcctgcccgactcggcgatcatcgcggcggccgtcgccaatccggac
accatcgaaaagctcacggcgctaccgattttcggcggctcgcggcagaagcgcagcgcg
caggtgtggctcgacgcgctgacccgggcccgggcggccgatcccccggcgtccgaaccg
aacaacgggctgccgccaccggcacggtggtcgcgccgcaagcccgaggcgttcgaacgg
ctggaaaagtgccgcgctgggctttccgaactgtccgaacgggtttcggtaccgacagag
aatctgctgacgcccgagaccgtgcggcgactgtgctgggactggcagccgcttcccgac
gtcgccgctgcggtcgacgaattcctcgccgcggcgggcgcccggccctggcagcgggag
ctgtgcggcccggtgttggccgctgctttgggttga
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