KEGG   Mycolicibacterium mucogenicum: C1S78_020775
Entry
C1S78_020775      CDS       T07324                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mmuc  Mycolicibacterium mucogenicum
Brite
KEGG Orthology (KO) [BR:mmuc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmuc03400]
    C1S78_020775
Enzymes [BR:mmuc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C1S78_020775
    5.6.2.6  RNA 3'-5' helicase
     C1S78_020775
DNA repair and recombination proteins [BR:mmuc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C1S78_020775
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr DEAD WH2_Lhr WH4_Lhr Helicase_C ResIII AAA_25 PhoH AAA_22 AbiEi_4 DUF6406 ROXA-like_wH AAA_11 Cas3-like_C_2
Other DBs
NCBI-ProteinID: QPG67924
UniProt: A0A8E4W1V8
LinkDB
Position
4259600..4264093
AA seq 1497 aa
MNPLDRFSDLTREWFAAAFSTPTPAQEQAWQAIADGHNTLVIAPTGSGKTLAAFLWAIDQ
LAQQPANTNGAKGTKVLYVSPLKALAVDVERNLSTPLTGITRVAERVGAPAPGITVGVRS
GDTSPVQRRQLIATPPDILITTPESLFLMLTSAARETLATVRTVIVDEVHAVAATKRGAH
LALSLERLDELLDQPAQRIGLSATVKPPEEVARFLSGAAPTTIVKPPAAKTFDLSVEVPV
PDMANLDGGTIWPDVEERIVDLIESHNSSLVFANSRRLAERLTARLNEIHAARSGIELPN
ERNPQIGGGAPATIMASGQTFGAPSLLAKAHHGSVSKEARAQVEDDLKSGRLKAVVATSS
LELGIDMGAVDLVIQVEAPPSVASGLQRIGRAGHQVGEISEGVLLPKHRTDLIDCAVTVQ
RMRAGEIETLQVPTNPLDVLAQHTVAAAALEPLDADRWFDAVRRSAPFAALPRSAFEATL
DLLAGKYPSTEFAELRPRLVYDRDTGTLTARPGAQRLAVTSGGAIPDRGMFTVYLATGDE
KPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVLPAPGQPARLPFWRGDAVG
RPAELGAAIGAFTGKLAGLPRAEFDEYCSTMGFNDYATDNLWQLLDEQRQATGTVPTDTT
FVVERFRDELGDWRIVLHSPYGLRVHGPLALAVGRRIMERYGIDEKPTASDDGIVLRLPD
TGENPPGADIFVFEADEIEPIVTAEVGGSALFASRFRECAARALLLPRRHPGKRSPLWHQ
RQRAAQLLDIARKYPDFPIVLETVRECLQDVYDVPMLIELMRRVAQRRIRVLDVQTATPS
PFAASLLFGYVGAFMYEGDSPLAERRAAALSLDATLLAELLGRVELRELLDPDVVTATIR
QLQHLTEDRAARDAEGIADLLRLLGPLSTEELRQRCTASDVEAWCATLQAAKRAVAVTFA
GQSWWAAVEDMGLLRDGLGVAVPVGVPASFTAAVTDPLGELLGRYARTNGPFTTTQAAAR
FGLGHRVTADALSRMVLDGKLIRGEFTDLPDSVDQQWCDATVLKILRRRSLAALRAQIEP
VSTAAYARFLPAWQQFGDARGIDGLASVIEQLAGVPIPASAVEPLVFGQRVSDYQPAMLD
ELLASGEVTWSGAGQIGANDGWVVFHRADTAPLSLAPGTEIEFTDTHRELLDTLSNGGAY
FFRQLAAEDSTDAKQALWELIWAGWVTGDTFAPVRALLGNAGRKPGGSHRQRQQRPPRLS
RYSVARPQARTVDPTVAGRWSALPPAEPESTTRAHFQAELLLGRYGVVTRGAADGLPGGF
ATLYKVLTAFEEAGRCQRGYFIESLGGAQFAVASTVDRLRNYLDSVDQSSPDYTAIVLAA
TDPGNPYGVALPWPDAAGHRPGRKAGALVALVDGELVWFLERGGKSLLSFGATPEQQRAA
AGALAELVSTGRLQSLLIEKVNGEAVLAPTPDAAQAEVHAALADAGFSRTPRGLRLR
NT seq 4494 nt   +upstreamnt  +downstreamnt
gtgaatccactcgacaggttcagtgacctgacccgggagtggttcgcggctgccttcagc
acacccactccggcccaggagcaggcctggcaggccatcgccgacggccacaacacgctg
gtcatcgccccgaccgggtccggcaagacgctggcggcgttcctctgggccatcgaccag
ctggcacagcagcccgccaacaccaacggcgccaagggcacaaaagtcctctacgtctcg
ccgctgaaggccctcgcggtcgacgtcgagcgcaacctgtccacgccgctcaccggcatc
acgcgggtggccgagcgggtgggcgcaccggcacccggcatcaccgtcggcgtgcggtcg
ggtgacacctctcccgtgcagcggcgccagctgatcgcgacgccgccggacatcctgatc
accacacccgagtcgctgttcctgatgctgacgtcggcggcccgcgagacgctggcgacg
gtgcggaccgtcatcgtcgacgaggtgcacgccgtcgcggcgaccaaacgcggcgcgcac
ctcgccctgtcgttggaacgtctcgacgagctgctcgaccagccggcgcaacgcatcggc
ctgtctgcgaccgtcaagccgcccgaggaggtcgcccgcttcctgtcgggagccgcgccc
accaccatcgtcaaaccaccggccgccaagaccttcgacctgagcgtcgaggtaccggtg
cccgacatggccaacctcgatggcggcaccatctggcccgatgtggaggaacgcatcgtc
gacctgatcgagtcgcacaattcgtcgctggtgttcgccaactcccggcggctggccgaa
cggctcaccgcgcggctcaacgagattcacgccgcccggtccggcatcgagctgcccaat
gagcgaaacccccagatcggcgggggcgcgccggccaccatcatggccagcgggcaaacc
ttcggtgcgccgagcctgctcgccaaggcccaccatggctcggtcagcaaggaggcgcgg
gcgcaggtcgaggacgacctcaagagcggccgcctcaaggccgtcgtcgccacgtcgagc
ctggaactcggcatcgacatgggagcggtcgatctggtcatccaggtcgaggcgccgccg
tcggtggccagtggtctgcagcgcatcggacgcgccggccaccaggtcggcgagatctcc
gagggcgtcctgctgcccaagcaccggaccgatctgatcgactgcgccgtcaccgtgcag
cggatgcgcgccggcgagatcgagaccctgcaggtacccaccaatcccctcgacgtgctg
gcccagcacaccgtcgcggcggccgctctcgaacccctcgatgccgaccgctggttcgac
gccgtccgccgcagcgcgccgttcgccgcgctgccgcgcagcgccttcgaggcgacgctc
gacctgctggccggcaagtacccttcgaccgagttcgccgagctgcggccgcgcctggtc
tacgaccgcgacaccggcaccctgaccgcccggcccggcgcgcagcggctggccgtcacg
tccggcggcgcgatcccggaccgcggcatgttcaccgtctacctggccacgggtgacgaa
aagccttcgcgggtaggcgaactcgatgaggagatggtctacgagtcgcggcccggcgac
gtcatctccctgggcgccaccagctggcggatcaccgagatcacccacgaccgggtgctg
gtgctgcccgcgcccggccagcccgcgcggttgccgttctggcgcggcgacgccgtcggc
cgtcccgctgagctgggcgcggccatcggcgcgttcaccggcaagctcgccgggctgccg
cgcgccgagttcgacgagtactgcagcacaatgggtttcaacgactacgccaccgacaac
ctgtggcagctgctcgacgagcaacggcaggccaccggcacggtacccaccgacaccacg
ttcgtggtggaacggttccgcgatgagctcggtgactggcggatcgtcctgcattcgcct
tacgggctgcgggtgcacgggccactggcgctggcggtgggtcgacggatcatggagcgg
tacggcatcgacgagaagcccaccgcgtccgacgacggcatcgtgctgcgcctgcccgac
accggggaaaacccgcccggcgccgacattttcgtgttcgaggccgacgagatcgagccc
atcgtcaccgccgaggtcggcgggtcggcactcttcgcatcgcgtttccgcgaatgcgcg
gcacgggcgctgctgctgccgcggcgccatcccggcaagcggtcgccgctgtggcaccag
cgacagcgggccgcgcagctgctggacatcgcccgcaagtacccggatttcccgatcgtg
ctggagaccgtgcgggaatgcctgcaggatgtctacgacgtcccgatgctcatcgagttg
atgcgccgtgtcgcacaacgccggatccgggtgctcgacgtgcagaccgccacgccgtcg
ccgttcgccgcgtcgctgctgttcggttacgtcggcgcgttcatgtacgagggcgacagc
ccgctcgccgaacgtcgtgccgccgcactgtcgttggacgccacgctgctggccgagctg
ctgggccgcgtcgaactgcgcgaactgctcgaccccgacgtcgtcaccgccaccatccgg
caattgcagcacctgacggaagaccgggccgcccgtgacgccgagggcatcgccgacctg
ctgcggttgctcgggccactgagcaccgaggaactccggcagcggtgcaccgcaagcgat
gtcgaggcctggtgcgccacgctgcaggccgccaagcgcgccgtggcggtgacgttcgcc
ggccagagctggtgggccgccgtcgaggacatgggcctgctgcgcgacggtctcggcgtc
gcggtgccggtcggcgtgccggccagtttcactgccgcggtgaccgacccgctgggcgaa
ctgctcggccgctacgccagaaccaacgggccgttcacgacaacccaggcggcggcccgc
ttcggcctcggtcaccgggtgactgccgatgccctgagccggatggtgctggacggcaag
ctcattcgcggtgagttcaccgatctgccggacagcgtcgaccagcaatggtgtgacgcc
acggtgctgaagattctgcggcgccggtcgctggccgcgctgcgggcccagatcgagccg
gtgagcaccgccgcgtacgcccggttcctgccggcctggcagcagttcggcgatgcgcgc
ggcatcgacggcctggcatcggtcatcgaacagcttgccggcgtgccgattccggcgtcc
gccgtcgaaccgctggtattcggtcagcgggtgtcggactaccaaccggcgatgctcgac
gaactgctggcctccggtgaggtcacctggtcaggtgccggccagatcggcgccaacgac
ggctgggtcgtcttccaccgggccgacaccgcgccgctgtcgctggcgccgggtacggag
atcgagttcaccgacacgcaccgcgaactcctggacacgctcagcaacggcggcgcctac
tttttccggcagctggccgcagaggacagcaccgacgcgaaacaggcgctgtgggaactg
atctgggccggctgggtcaccggcgacactttcgcccccgtccgggcgctcctcggcaac
gcggggcgcaaacccggaggatcgcaccggcagcggcagcagcgcccgccccggctcagc
cgctacagcgtcgcccggccacaggcccgcaccgtcgacccgacggtcgccggccggtgg
tcggccctgccgcccgccgagccggaatccacgacgcgggcacactttcaggccgagctg
ctgctgggccgctacggcgtcgtcacccgcggcgcggccgacggcctgcccggcggattc
gccacgctgtacaaagtgctgacggcgttcgaggaggccgggcgctgccagcgcgggtat
ttcatcgaatcccttggtggcgcgcagttcgcggtggcctcgacggtggaccggttgcgc
aactatctcgacagcgtcgaccagagcagccccgactacaccgccatcgtgctcgccgcc
accgacccgggcaatccctacggcgtcgccctgccgtggcccgacgccgccgggcatcga
ccgggccgcaaggcgggcgcactggtggcgttggtcgacggcgagttggtgtggttcctc
gagcggggcggaaagtcgttgttgtcgttcggcgccacgccggaacaacaacgcgcggcg
gccggtgcgctggcagagctggtgagcaccgggcgactgcagtcgctgttgatcgagaag
gtcaacggggaggcggtattggctcccacccccgacgccgcgcaggccgaggtccacgcc
gcgctggccgacgccggtttctcccggacgccgcggggtctgcggctgcgctga

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