Mycolicibacterium mucogenicum: C1S78_025250
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Entry
C1S78_025250 CDS
T07324
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmuc
Mycolicibacterium mucogenicum
Pathway
mmuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1S78_025250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmuc03019
]
C1S78_025250
03400 DNA repair and recombination proteins [BR:
mmuc03400
]
C1S78_025250
Enzymes [BR:
mmuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1S78_025250
Messenger RNA biogenesis [BR:
mmuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1S78_025250
DNA repair and recombination proteins [BR:
mmuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1S78_025250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QPG72601
UniProt:
A0A8E4W630
LinkDB
All DBs
Position
complement(5176315..5178330)
Genome browser
AA seq
671 aa
AA seq
DB search
MLRDDQWVAIEALVVQGRRALVVQRTGWGKSAVYFIAAKLLRAAGRGPTVIVSPLLALMR
NQVASAERAGVRAATINSSNVTEWDEVHQRVTSGDLDVLLVSPERLNNPDFRDAVLPALA
ADAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIGELGSGIPVLATTATANDRVVQDVAAQL
GVGGGDTLVLRGGLDRESLRLSVVHAGGPAQRAAWLAAHLDSLPGSGIVYTLTVSQAHDI
AALLREQGHTVASYTGSTEAAEREQLEADLLNNRVKALIATSALGMGFDKPDLGFVVHLG
APSSPIAYYQQVGRAGRATSSAEVILLPGKEDADIWRYFASVAFPSEALVRKVIGELEPD
RALSTAALEPLVDLNRSRLEMVLKVLDVDGAVRRVKGGWISTGEPWSYDEERYRNLDAAR
QREQQAMLDYQATTECRMVFLRSQLDDPELDGQGCGRCDNCAGARYAADVDAEAASTVRD
QLMRPGVELAPRKQWPTGLGSLGIGLSGRISGGAEPGRVIGRLTDLGWGARLRQLLDGPD
AEVPDAVVQAAVAVLKAWNWKDRPVAVMGLDSERHPQLIGSLVTRLAELGRLQNLGTLYY
RPQRRPVTAANSAYRVAALVDSWEAPTLDVSGPVLLVDDLVDTGWTMTMATQVLRTAGAP
AVLPFAIAAVS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcgcgacgaccagtgggtggccatcgaggccctggtggtccagggtcgccgagcg
ctggtggtgcagcgcaccgggtggggcaagtccgcggtgtacttcatcgccgccaagctg
ctgcgggccgccggccgcggcccgaccgtcatcgtctcgccgctgctggcgctgatgcgc
aaccaggtggcgtcggccgaacgcgcgggcgtccgcgccgccaccatcaactccagcaat
gtcaccgagtgggacgaggtgcaccagcgggtcacctccggagacctcgacgtgctgctg
gtcagcccggagcgcttgaacaaccccgactttcgtgacgccgtcctgcccgcactggcc
gccgacgccggactcgtcgtcgtcgacgaggcgcactgcgtctccgactggggccacgac
ttccggcccgactaccggcgcatccgcaccctgatcggtgagttgggttcgggcataccg
gtgctcgccaccaccgcgactgccaacgaccgcgtggtgcaggacgtggccgcgcagctg
ggcgtcggcggcggggataccctggtgctgcgcggcgggctggaccgggagtcgctgcgc
ctgtcggtggtgcatgccgggggaccggcgcagcgggcggcatggcttgcggcgcatctg
gattcgctgcccggctcgggcatcgtctacaccctgacggtgtcgcaggcacatgacatc
gccgcgctgctgcgcgagcagggccacaccgtcgcctcctacaccggatccactgaagcc
gccgaacgcgaacagctggaagccgacctgctgaacaaccgggtcaaggcgctcatcgcc
acctcggcgctgggcatggggttcgacaaaccggacctgggcttcgtcgtgcacctgggc
gctccgtcgtcacccatcgcgtactaccagcaggttggccgtgccggccgcgccacctcg
agcgccgaggtgatcctgctgccgggcaaagaggacgctgacatctggcggtacttcgcg
tcggtcgcgttcccgtcggaagccttggtacgcaaggtgatcggcgaactcgaaccggac
cgggcgctgtcgaccgcggccctggaaccgttggtcgacctcaaccggtcccggctcgag
atggtgctcaaagtgctcgacgtcgacggtgcggtgcgccgcgtcaagggcggctggatc
agtaccggcgagccgtggtcgtacgacgaagagcgctaccgcaatctggatgccgcgcgg
cagcgcgagcagcaggccatgctggactaccaagcgacgaccgagtgccgaatggtgttc
ctgcgcagccaactcgacgatcccgagctcgacggccagggctgcggccggtgcgacaac
tgtgcgggtgcgcgctacgccgccgacgtcgatgcggaggccgcgtcgacggtgcgggac
cagctgatgcggcccggcgtggagctcgccccgcgtaaacagtggccgacggggctgggc
tccctgggaatcgggttgtccggacgcatatccggtggcgccgagccgggccgcgtcatc
gggcgactgaccgacctggggtggggcgcccggctgcgccaattgctcgacgggcccgac
gccgaggtccccgacgccgtggtgcaggcggcggtggcggtcctcaaggcctggaactgg
aaggaccgcccggtggcggtgatgggtctggactccgagcggcatccgcagctgatcggt
tcgctcgtcacccggctggcggagctgggccggctgcagaacctgggcacgctgtactac
cggccgcagcggcgtcccgtgacggcggccaattctgcgtaccgggttgcggcgctggtg
gattcgtgggaggcgcccacgctggacgtgagcggtccggtgctgctggtcgacgatctc
gtcgacaccggctggaccatgaccatggcgacgcaggtgctgcgcaccgctggggcgccc
gccgtgttgccgttcgcgatcgcggcggtcagctga
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