Microcebus murinus (gray mouse lemur): 105855252
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Entry
105855252 CDS
T07238
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105855252 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmur03021
]
105855252 (PCF11)
03019 Messenger RNA biogenesis [BR:
mmur03019
]
105855252 (PCF11)
Transcription machinery [BR:
mmur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105855252 (PCF11)
Messenger RNA biogenesis [BR:
mmur03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
105855252 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
105855252
NCBI-ProteinID:
XP_012591578
Ensembl:
ENSMICG00000008986
UniProt:
A0A8C5XCX7
LinkDB
All DBs
Position
5:complement(62748771..62773543)
Genome browser
AA seq
1685 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPNISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPASAPSKLHVSQIPPMAVKAPHQVPVQPEKTRPGPSLQIQDLKGTNRDPRLN
RISQHSHGKDQSHRKEFLMNTLNQSDIKPSKTVPSEKLNSSKQEKSKSGEKITKKELDQL
DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK
EKRKTADKKDKDEHMKSSEHRLVGSRNKIINGIVQKQDTIAEESEKQGTKPGRSSTRKRS
RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGIKQSHMEEFTPPSRE
DRNAKRSTKQDVRDPRRMKKTEEERPQETANQHSTKSGTEPKENVENWQSSKSTKRWKSG
WEENKSLQQGDEHSKSPHLRHRESWSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQEDFLVVVHQIRQIFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPATRFAGLDTNQRLTALAEDRPLFDGPARPSVTRDGPTKMI
FEGPNKLSPRIDGPPTPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDSPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPSVPGSGLRIEGPLGQGGPRFEGCHTLRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQ
PGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSF
NQTGAYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGSQSFSNPLNRASGHY
FDEKNLQNSQFGNFGNLPAPIGNIQASQPVLTGVGQPVAFGQGQQFLPVHPQNPGAFVQN
PSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVAAQPPPEEEEDQN
EDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNR
TEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQ
SVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDC
TPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPTEIKTEND
TVESV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcgtcgctggaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaacgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaagttacgttcc
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattcg
ttagatcctgcttggcctattaaacctctgccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaggagccttcaacacctggcacagtggtc
agttcccctaacatctccactcctccaattgttcctgatatacaaaagaatcttacccaa
gaacaactaatacggcagcagttactggcaaaacaaaaacagttgttagagcttcagcag
aaaaagcttgaactggagctagagcaagctaaagcacaactggcagtttctcttagcgtt
cagcaggagacatccaacttaggtcctgcatcggcaccttctaaattacatgtttcacaa
attccccctatggcagttaaagctccccatcaggttcctgtgcaacctgagaaaacccgt
ccaggtccatccttacaaattcaggatttgaaagggactaaccgggatccccgtcttaat
aggataagccaacattctcatggaaaagatcaaagtcacaggaaagaattcctaatgaac
acattgaaccaatctgatattaagccaagtaaaactgtaccctctgaaaaactaaactca
tccaagcaagaaaaaagtaaatcaggtgaaaaaataacgaagaaagaacttgaccaatta
gattctaaatctaaatctaaatctaaatcgccatcacctttgaaaaacaaattatctcac
acaaaagacttgaaaaatcaagaatctgaaagtatgaggttgtctgatatgaacaagaga
gatccaagattaaaaaaacatcttcaagataagactgatggcaaagatgatgatgtaaaa
gagaagaggaaaactgcagataaaaaagataaagatgagcacatgaaatcatctgagcac
agactggttggaagtagaaataaaataataaatggcattgtacaaaaacaggatacaata
gcagaagaatcagaaaaacaggggacaaaaccagggagatcgagtactagaaagcgatca
agatctcgatcacctaagtctcggtcaccaattatacattccccaaagagaagagatagg
cggtcacccaaaagaaggcaaaggagtatgtctccaacttcaacacccaaagctggaaag
attcgccaatcaggaattaagcagtcacatatggaagagtttacaccaccttccagggaa
gacagaaatgctaagcgaagtactaaacaggatgttcgagatccaaggcgaatgaaaaag
actgaagaggaacgaccacaagaaactgcaaatcagcattctacaaagtcgggcactgaa
ccaaaggagaatgtggaaaattggcaaagttccaagtctaccaaaagatggaaatctggt
tgggaagaaaataaaagtttacaacagggtgatgaacatagtaaatctcctcatctaagg
catagggagagctggtcaagcactaaaggaattttgtcgcctcgagcccccaagcagcag
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggaa
gacttccttgttgttgtgcatcaaattcgacagatatttcagtatcaagaaggtaaacat
agatgcaatgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtacgagaagaacagagatctccattcaatgat
cgttttccacttaagcgacctcggtatgaagattcagataaaccttttgtagatagtcca
gcaacaagatttgccggtcttgatacaaatcagcgacttacagctttggctgaagataga
ccattattcgatggacctgctaggccatcagtaacaagagatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctagaattgatggacctcccacaccaggttctctt
cggtttgatgggtcaccaggacaaatggggggaggaggccctttgagatttgaaggacca
caaggtcagctaggaggtgggtgtcctttgagatttgaaggtcctccaggaccagtaggg
acgcctctgcggtttgaggggccaattggtcaagctggaggaggtggttttcggtttgaa
ggttcccctggtcttaggtttgagggatctgcaggtggtttgcgatttgagggaccaggg
ggccagcctgtgggtggtctcagatttgaaggacatcgtggtcaacctgtaggtggtcta
agatttgagggacctcatggtcagcctgtgggtggacttagatttgatagtccccgaggt
cagcctgtaggtggacttagatttgagggaggtcatggtccatcaggggctgcaattagg
tttgatggacctcatggtcagccaggaggagggatcagatttgagggccctttgttacag
caaggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtctgagattt
gaaggacaacataatcaacttggtgggaaccttaggtttgagggtccacatggtcaacca
ggggttggaatcaggtttgaaggacctttagtccaacaaggaggtggaatgaggtttgag
ggtccttctgtaccaggaagtggcctgagaattgaagggcctctgggtcagggtggtcca
agatttgaaggttgtcatactttaaggtttgatgggcagccaggtcagccatcactcttg
ccaagatttgatggattacatggtcagccaggtcctagatttgaaagaactcctggtcag
ccaggcccacagaggtttgatggaccacctggacagcaggttcaaccaagatttgacggt
gtacctcaaagatttgatggtccacaacaccagcaagcatcaaggtttgatattcctctt
ggtcttcaaggcacaagatttgacaatcatccttcacaaaggcttgaatcagtgtctttc
aatcagactggtgcatataatgatcctcctggcaatgctttcaatgccccgtcccaagga
ctacagttccaaagacatgaacaaatatttgattcacctcaaggaccaaattttaatgga
ccacatggtcctggaagccagagtttttcaaatccacttaaccgagcttctggacactat
tttgatgaaaaaaatcttcagaattctcaatttggaaactttggcaatttacctgctccg
ataggaaatattcaggcgtctcaaccggttctgactggtgttggtcagccagtggctttt
ggccaaggacaacaatttttaccagttcatccacaaaatcctggagcatttgttcagaat
ccttcaggagcccttcctaaggcatatcctgataatcatctcagtcaggtggatgtaaat
gaattgttttcaaaactgttaaaaacaggaattctcaaattgtcccagcctgattcagca
acaacacaagtaaatgaagttgctgctcagcctccccctgaagaggaggaagatcaaaat
gaagatcaagatgttccagatcttactaattttacaattgaagaattgaaacaacgctat
gatagtgttataaatcgactatacactggtattcagtgttactcttgtggaatgaggttt
acaacatcacagacagatgtatatgcagatcacttggactggcattatcggcaaaataga
acagaaaaagatgttagcagaaaagtcactcatagacggtggtactacagtttaacagac
tggatagaatttgaagaaatagctgatctggaagaacgtgcaaagagccagttttttgaa
aaggtgcatgaagaagttgtgctcaaaactcaggaggctgctaaagaaaaggaattccaa
agtgtacctgctggaccagctggagcagttgagagttgtgaaatctgtcaagaacaattt
gaacaatactgggatgaagaagaggaggaatggcatttaaaaaatgctattagagtagat
ggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgattgt
acaccatctcccagcaagacaccagttgaaaaccccttgaacattatgttgaacattgtc
aaaaacgaattgcaggaaccttgtgaaagtcccaaagttaaggaagaacggattgatact
ccaccagcttgtacagaggaaagcatagcaacacccactgaaattaaaacagaaaatgat
acagttgagtcagtctaa
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integrated database retrieval system
