Microcebus murinus (gray mouse lemur): 105855742
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Entry
105855742 CDS
T07238
Symbol
VPS8
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105855742 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmur04131
]
105855742 (VPS8)
Membrane trafficking [BR:
mmur04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105855742 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
UBA_HOIP
EIF3I
PHD
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
105855742
NCBI-ProteinID:
XP_012592303
Ensembl:
ENSMICG00000048987
LinkDB
All DBs
Position
1:77271548..77474221
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AA seq
1428 aa
AA seq
DB search
MENEPDHENVEQSLCTKTTEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGGTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATXGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ
IYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLKPCKAAELVATHFSGQIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE
SLQISPCITEQFIELSCQFNPNQVIETLQVLECYRLEETIQITQKYQLHEATAYLLEKKG
DIHGAFLIMLERLQSKLQEITHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSSSAVPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTTEIEGQTRWTCYKCSSSNKVGKLSE
NSSEIKKGRITPSQVKMSPSYHQSKGDPTAKKAASEPVLDPQQIQAFDQLCRLYRGSSRL
ALLTELSQSRGSESYRLFGGSQSSPAFSSIFQNENFQLQLMPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctctgtaccaagactacggaa
gaagaactgaataagtctttcaatctagaagcttcactttcaaaattctcttacatagat
ctagacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactaaatgagactgatgatgaagatgag
tcttttgttcttgaggatcctacattgttaaacattgatactattgattctcactcatat
gatacttcatctgtggcaagctcagacagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcactccatggatcagttatgcgacattcacttttgaaggga
atttctgcccagatagtatctgcagctgacaaagtagatgctggcttgcccacagcaatt
gcagtgtccagtctgatagcagtgggtacatctcatggactggctttaatatttggaaaa
gatcagaaccaagctctgcgactgtgtctgggcggcactagtgttggaggtcagtatgga
gccatctcggccctcagcatcaacaatgactgctcgagacttctttgtggcttcgctaaa
ggtcagatcaccatgtgggatttggccagtggaaaacttctaagatcaataacagatgct
catcctccaggaacagcaatattgcatatcaagtttacagatgacccaactcttgcaatt
tgcaacgacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgaga
acatgtgaatctagatgtctcttcagtggttccaagggtgaagtttgctgtattgagcct
ctacattctaagcctgaattgaaagatcatcccatcacacagttttcattattggccatg
gcatccttaacaaagatactggtcattggattgaaaccatccttgaaagtatggatgact
tttccctatggtcggatggatccttccagtgttccattgctggcctggcacttcgtggca
gtgcataattatgtcaatcccatgctagccttctgcagaggagatgttgttcattttctg
ttggttaagagagatgaatctggagcaatacatgttacaaagcaaaagcatcttcaccta
tactatgacctcatcaactttacttggataaactcacgcacaattgtgctcctagacagc
gtagagaagttgcatgtgattgatcggcaaactcaagaggaattggaaacggtggaaatc
tcagaagttcagttggtctataacagcagccatttcaaatcactagccaccnggggaaat
gttagccaggcactggctttggttggagaaaaggcttgttatcagtccataagtagctat
ggtggtcagatcttttatttgggaacaaaatctgtttatgtgatgatgctgaggagctgg
agagagagagtggatcatctcctgaaacaggattgtcttacagaagccttggctcttgca
tggtctttccatgaaggaaaagcaaaagcagtagtgggattatctggagatgccagcaag
cgaaaagctgttgttgcagaccggatggtagaaatcctattccattatgcagatagagct
ctgaaaaagtgtccagaccaaggaaaaatccaggtgatggagcagcattttcaggacatg
gtgcctgtcatagttgattactgccttctgctacaacgaaaggatctcttatttagtcag
atatatgacaaattaagtgagaattcagtggccaaaggagtgtttttggagtgcctcgaa
ccatatattttaagtgataaattggtgggtatcacaccccaggtaatgaaagacttgatt
gttcatttccaagataagaagttaatggaaaatgtggaagcccttattgtgcatatggat
atcaccagcctggatattcagcaggtagttcttatgtgttgggaaaatcgtttatatgat
gctatgatctacgtctacaacagaggcatgaacgaatttattagtccaatggagaaactt
ttcagagtcattgctcctcctctgaatgcaggaaaaacactaacagatgaacaagttgtt
atgggaaacaagcttcttgtatatattagctgttgtctagcaggtcgtgcctatcccctt
ggtgacatccctgaagatcttgttcctttggttaaaaatcaggtttttgaatttctaatt
cgcctgcattcagcagaagcttcccctgaggaagaaatctatccttatgtgcggacttta
ctacattttgacacaagagaatttctgaatgtattggcactgacttttgaagattttaaa
aatgacaagcaagctgtggaatatcaacagcgaattgtagatattttgttgaaagttatg
gtggagaattcagattttactccctcacaagtagggtgtctctttacattcctcgctcgg
cagcttgcaaagcctgacaataccttgttcgtaaatagaacgctttttgatcaggtcctt
gaatttctctgtagtcctgacgatgactcccgacactctgaacgacagcaggtcctttta
gaattgctgcaggctggaggcatagttcaatttgaagagagtcggctcatccgtatggca
gaaaaagctgagttctatcaaatctgtgaattcatgtatgaacgagaacaccaatatgac
aaaattattgattgctacttacgtgacccattgagagaggaggaagtctttaattacatt
cacaatatcttatccattcctggacacagtgcagaggaaaagcagtctgtatggcagaaa
gcaatggatcatattgaggaactcgtgtctctgaagccctgtaaagctgcagagctggtt
gctacccacttttctgggcagattgaaacagtcattaaaaaacttcagaaccaggttttg
cttttcaaatttttgaggagtcttcttgatccaagggaaggtattcatgtaaatcaagaa
tcgctgcagatatctccctgtatcacagagcagttcattgagctgtcgtgtcagttcaac
ccaaaccaagttatagagacgctgcaagttcttgagtgctatcgcctagaagaaactatt
cagattactcagaagtatcaacttcatgaagccactgcttatctattagaaaagaaagga
gatattcatggtgcctttttaataatgttagagcgactacaaagcaaacttcaagaaata
acacatcaaggcgaaaataccaaagaggatccctcactgaaggatgttgaagatactatg
gtagagacaattgctctttgccagagaaattcacataatctgaaccagcagcaacgagag
gctctctggtttccattattggaggcaatgatggcccctcagaagctgtccagttctgct
gtccctcatctacactcagaagccctgaaatctttgaccatgcaagttctaaacagcatg
gcagcatttattgcccttccatcaatcttgcaaagaatcttacaggatccagtttatgga
aaaggaaaacttggagaaatccagggacttattctgggcatgttagatacctttaactat
gaacaaactctgctggaaacaacaactagccttctaaaccaagatctccattggtctttg
tgtaaccttagagcttcagtcactagaggactgaatcccaaacaggattactgctctata
tgtttgcagcagtacaagagacgccaggaaatggctgatgaaattattgtgtttagctgt
ggccatttgtatcactcattctgtctacaaaacaaagaatgtaccacagaaattgagggc
caaacaagatggacatgctacaagtgcagctcaagtaacaaagtaggaaaactaagtgag
aattcatctgaaattaaaaagggaaggataaccccatcacaggtaaaaatgtctccttca
tatcatcagtccaaaggggatcctacagctaagaaggcagcctcagaacctgttctggat
ccacagcaaatccaagcatttgatcagctttgccgtctctaccgaggaagttccaggtta
gctctccttacagaactctcccagagtcgcggcagtgagagctacaggctgttcggcggc
tcccagagcagccctgccttcagcagcatcttccagaatgagaacttccagctgcagctc
atgcccccgcctgtgactgaggactga
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integrated database retrieval system
