Microcebus murinus (gray mouse lemur): 105856827
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Entry
105856827 CDS
T07238
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04068
FoxO signaling pathway
mmur05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
105856827 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
105856827 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmur04121
]
105856827 (RAG1)
Enzymes [BR:
mmur01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105856827 (RAG1)
Ubiquitin system [BR:
mmur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105856827 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
105856827
NCBI-ProteinID:
XP_012594188
LinkDB
All DBs
Position
5:complement(27343417..27346548)
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AA seq
1043 aa
AA seq
DB search
MAVSFPPTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKAPEEAQKEKKDFSEGKPSLE
QSPAVLDKTGGQKPVLTQPALKAHPKFSKKFHDDGKARGKAIHQANLCHLCRICGDSFKT
DEYNRRYPVHGPVDGKTQGLLRKKEKRATSWPDLIAKVFRIDVKADVDTIHPTEFCHNCW
SIMHRKFSSAPSEVYFPRNTTMEWHPHTPSCDICHTARRGLKRKVPQPNVQLSKKLKTVL
NRAKKARQRKRRAQVRIRSREVMKKIANCNKIHLSTKLLAVDFPEYFVKAISCGICEHIL
ADPVETSCKHVFCRICILRCLKVMGSYCPSCQYPCFPTDLESPVKSFLSVLNSLMVKCPA
KECNEEVSLEKYNHHVSSHRESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKMQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTNVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMKSQDLDDYLSGPFTVVVKE
SCDGMGDVSEKHGSGPVVPEKAVRFSFTIMKITMAHGSQNVKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKDSELMLEMGGILRTFKFVFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVLHSITRSHAENLERYEVWRSNPYHESVEELRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEAYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVDAVCELIASEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKNSGFTVS
SQASVGDSLGIEDSLESQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccttcccacccaccctgggactgagttctgccccggatgaaattcaacac
ccacatattaaattttcggaatggaaatttaagctattcagggtgagatcctttgagaag
gcacctgaagaagctcaaaaggaaaagaaggatttctccgaggggaaaccttctctagag
caatctccagcagtcctggacaagactggtggtcagaagccagtcctgactcaaccagca
ttaaaagcacaccctaagttttcgaagaaattccacgatgatggaaaagcaagaggcaaa
gcgatccaccaagccaacctttgccatctctgccgcatctgtggggattctttcaaaact
gatgagtacaacaggagatacccagtccacgggccagtggatggtaaaacccaaggcctt
ttacgaaagaaggaaaagagagcaacttcctggccagacctcattgccaaggttttccgg
attgacgtgaaggcagatgttgacacgatccaccccactgagttctgccataactgctgg
agcatcatgcacaggaagtttagcagtgccccaagtgaggtttacttcccaaggaacaca
accatggagtggcacccccacacaccctcttgtgacatctgccacactgcccgtcgggga
ctcaagaggaaggttcctcagccaaatgtgcagctcagcaaaaaactcaaaactgtgctc
aaccgagcaaaaaaagcccgtcagcgcaagagaagagctcaggtgaggatccgtagcagg
gaagtcatgaagaagattgccaactgcaataaaatacatctcagtactaagctcctggca
gtggacttcccggagtacttcgtgaaagctatctcctgcgggatttgtgaacacattctg
gctgaccctgtggagaccagctgtaagcatgtattttgcaggatctgcattctcaggtgc
ctcaaagtcatgggcagctattgtccctcttgccaatatccatgcttccctactgacctg
gagagtccagtgaagtcctttctgagtgtcttgaattccctgatggtgaaatgtccagca
aaagagtgcaacgaagaggtcagtttggaaaaatataatcaccatgtctcaagtcacagg
gaatcaaaagagacttttgtgcatattaataaaggaggtcgcccccgtcagcatcttctg
tcattgacccggagagctcagaaacaccggctgagggagctcaagatgcaagtcaaggct
tttgctgacaaagaagaaggtggagatgtgaagtctgtgtgcctgaccttgttcctgctg
gccctgagggcgaggaatgagcacagacaagcggatgagctggaggccatcatgcaggga
cggggatctggcctgcagccagctgtttgcttggccatccgcgtcaacaccttcctcagc
tgcagtcagtaccacaagatgtacaggaccgtgaaagctatcacagggaggcagattttc
cagcctctgcatgcccttcggaatgctgagaaggtcctcctgccaggctaccaccccttt
gagtggcagccacctctgaagaacgtgtcttccagcaccaatgtgggcattattgatggg
ctgtctggactatcctcctccgtggatgattacccagtggacaccattgccaagaggttc
cgctatgattcggctttggtgtctgctttgatggacatggaagaagacatcttggagggc
atgaaatcccaagacctggatgactacctgagtggccccttcactgtagtggtgaaggag
tcttgtgatgggatgggagatgtgagtgagaagcacggcagtgggccagtagtcccggaa
aaggcggttcgcttttcattcacgatcatgaaaattactatggcacatggctcacagaac
gtgaaggtgtttgaggaagccaaacctaactctgagctgtgctgcaagccactgtgtctt
atgctagcagacgagtctgaccacgagaccctgactgccatcctgagccctctcattgct
gagagggaggccatgaaggacagtgaactgatgcttgagatgggaggcatcctcaggact
ttcaagttcgtcttcaggggcaccggatatgatgaaaaacttgtccgggaggtggaaggc
ctcgaggcttctggctcggtctacatttgtactctttgtgatgccacccgtctggaagcc
tctcaaaaccttgtcttgcactccataaccagaagccacgccgagaacctggaacgctat
gaggtctggcgttccaacccgtaccatgagtctgtggaagaactgcgggacagggtgaaa
ggggtctcggccaaacctttcattgagacggtcccttccatagacgcactgcactgtgac
attggcaatgcggctgagttctacaagattttccagctagagataggggaggcgtataag
aatcccaatgcttccaaagaggagaggaaaagatggcaggccacgctggacaagcatctc
cggaagaagatgaacctgaaaccaatcatgaggatgaacggcaactttgccaggaagctc
atgaccaaagagactgtcgatgcagtctgcgaattaattgcttctgaggagaggcatgaa
gctctgagggagctcatggacctttacctgaagatgaaacccgtatggagatcatcatgc
cctgctaaagagtgcccagagtccctctgccagtatagtttcaactctcagcgttttgct
gagctcctctctaccaagttcaagtatagatacgagggcaaaatcaccaattattttcat
aaaactctggcacatgtccctgaaattatcgagagggatggctctattggggcatgggcg
agtgagggaaatgagtctggtaacaaactgttcaggcgcttccggaaaatgaatgccagg
cagtccaagtgctatgaaatggaagatgtcctgaaacaccactggttgtatacttccaaa
tacctccagaagtttatgaatgctcataatgcattaaaaaactctgggtttaccgtgagc
tcgcaggcaagtgtaggggactcattaggcatagaggactctctggaaagccaagattca
atggaattttaa
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