Microcebus murinus (gray mouse lemur): 105857114
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Entry
105857114 CDS
T07238
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03008
Ribosome biogenesis in eukaryotes
mmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105857114 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
105857114 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmur03021
]
105857114 (XRN2)
03019 Messenger RNA biogenesis [BR:
mmur03019
]
105857114 (XRN2)
03009 Ribosome biogenesis [BR:
mmur03009
]
105857114 (XRN2)
03016 Transfer RNA biogenesis [BR:
mmur03016
]
105857114 (XRN2)
Transcription machinery [BR:
mmur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105857114 (XRN2)
Messenger RNA biogenesis [BR:
mmur03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
105857114 (XRN2)
Ribosome biogenesis [BR:
mmur03009
]
Eukaryotic type
Pre-60S particles
RNases
105857114 (XRN2)
Transfer RNA biogenesis [BR:
mmur03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
105857114 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
105857114
NCBI-ProteinID:
XP_012594672
Ensembl:
ENSMICG00000008126
UniProt:
A0A8C5XCT4
LinkDB
All DBs
Position
18:complement(4954060..5031390)
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECSGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFIRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPSGILTPHALSSRNSPGSHVASNPRHAAYEMRMQNNSSPSISPNTSF
TSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETRRNSLGGDVLFVGKHHLLHDFVLELYQTGSTKPVDVPPELCHGIQG
KFSLDEEAILPDQVVSSPVPMLPDLTQNTAISINFKDPQFAEDYIFKAVMLPGARKPAAV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGVYNSAAPPPAT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQPQRFDRGVGAEPLLPWNRMLQTQ
NAAFQPNQYQMIAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggcgtttttccgctggctcagtcgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaggaatgcagtggtgtaaagattccagttgatgccagtaaa
cctaatccaaatgatgtggagtttgataatctatatttggatatgaatggaatcatccat
ccctgtactcatcctgaagataaaccagcaccaaaaaacgaagatgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaagaccaagacgacttctctacatg
gcaatagatggagtggcaccacgtgctaaaatgaaccagcaacgttcgaggcggttcaga
gcatcaaaagaaggaatggaggcagcagtcgaaaagcagcgagttagggaagaaatactg
gcaaaaggtggctatcttcctcctgaagaaataaaagaaagatttgacagcaactgtatt
acaccaggaactgagttcatggacaatcttgccaaatgcctccgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaatttgacagttattttatctgatgctagtgct
cctggtgaaggagaacataaaatcatggattatattagaagacaaagagcccagcctaac
catgacccaaatactcatcattgtttatgtggagcagatgctgatctcattatgcttggc
ctggctacacatgaacccaactttaccattattagagaagaattcaaaccaaacaaaccc
aaaccatgtggtctttgtaatcagtttggacatgaggtcaaggattgtgaaggtttgcca
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccttgtgcagaaggagag
tttatctttattcgtcttaatgttcttcgtgagtatttggaaagagaacttaccatggcc
agccttccgttcacatttgatgtcgagaggagcattgatgactgggtcttcatgtgcttt
tttgtgggaaatgacttccttcctcacttgccatcattagagattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttcactcctagtggaatattaactcct
catgccttgagttcaagaaattcaccaggttctcacgtagccagtaatccgagacatgca
gcctatgaaatgaggatgcagaataattctagtccttcaatatcacctaatacaagtttc
acatctgatggttccccatctccaataggaggaattaagcgaaaagcagaagacagtgac
agtgaacctgagccagaggataacgtcaggttatgggaagctggttggaagcagcggtac
tataagaacaaatttgatgttgatgcagctgatgagaaattccgtcgtaaagttgtacag
tcttatgttgaaggactttgctgggttcttcgatattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgcaccatttgcttcagattttgaaggtattgcagac
atgccatctgattttgagaagggtacaaaaccgtttaaaccactggaacaacttatggga
gtttttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgat
cccgattctagtataattgacttctatcctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctgttgccatttgtggatgagcgaaggctgcgagct
gccctagaagaggtatacccagacctcactccagaagagaccagaagaaacagccttgga
ggtgatgtcttatttgtggggaaacatcatctactccacgacttcgttttagagctgtac
caaacaggttctacaaagccagtagatgtaccacctgaactatgtcatgggattcaagga
aagttttctttggatgaagaagccattcttccagatcaagtagtatcttctcctgttccc
atgttaccagatctgacacagaacactgcaatcagtattaattttaaagacccacagttt
gctgaagattacatttttaaagctgtgatgcttcctggagcaagaaagccagcagcagta
ctgaaacccagtgactgggaaaaatccagcaatggacgccagtggaagccccagcttggc
tttaaccgggaccggcgacctgtccacctggatcaggcagccttcaggactttgggccat
gtcatgccaagaggctcaggaactggtgtttacaacagtgctgcaccaccacctgcgact
tatcagggaaacttatacaggccactgttaagaggacaagcccagattccaaaacttatg
tcaaatatgaggccccaggattcctggcgaggtcctcctcctcttttccagccacaaaga
tttgacagaggtgttggagctgaacctctgctgccatggaaccggatgctccaaacccaa
aatgcagccttccagccaaaccagtatcagatgatagcaggacctggtggctatccaccc
agacgagatgatcgtggaggaagacagggatatcccagagaaggaaggaaataccccttg
ccaccaccctcaggaagatacagttggaattaa
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