Microcebus murinus (gray mouse lemur): 105857721
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Entry
105857721 CDS
T07238
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03013
Nucleocytoplasmic transport
mmur03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105857721 (UPF2)
03015 mRNA surveillance pathway
105857721 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmur03019
]
105857721 (UPF2)
Messenger RNA biogenesis [BR:
mmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105857721 (UPF2)
mRNA cycle factors
P-body specific factors
105857721 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
105857721
NCBI-ProteinID:
XP_012595770
Ensembl:
ENSMICG00000001716
LinkDB
All DBs
Position
25:21445040..21582091
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AA seq
1251 aa
AA seq
DB search
MPAERKKPASMEEKDSLLNNKEKDCGERRPVSSKEKPKDDLKLTAKKEVSKAPEDKKKRL
DEDKRKKEEKERKKKEEEKVKAEEESKKKEEEEKKKHEEEERKKQEEQAKRQQEEEAAQM
KEKEESVQLHQEAWERHQLRKELRGKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVSSIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLNFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLVDLKAFVPAI
LFKDNEKSCQNKESNKDDSKEAKEPKDNKEVSSPDDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGKQLITDRRL
HKGLKPENNTQLYRSFNIFEGSDNDDDEGEEEEEENTDYLTDSNKENETDEENTEVMIKG
GGLKHIPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGG
EGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDI
NERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGR
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagactctttactaaacaac
aaggaaaaagactgcggtgaaaggcggccagtgagcagcaaggagaagccaaaagacgat
ctcaaactcactgccaagaaggaggtcagcaaggcccctgaagacaagaagaagagactg
gacgaagataagagaaaaaaggaagagaaggagcgcaagaaaaaagaagaagaaaaggtg
aaggcagaggaagaatcaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagagaaagaagcaagaggagcaggcgaaacgtcagcaagaagaagaagctgctcagatg
aaagagaaagaagaatccgttcagcttcatcaggaagcttgggaacgacatcagttaagg
aaggaacttcgtggcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgcctggactcaagtttgaagaaaaataccgcttttgtcaagaaactaaaaactatt
acggaacagcagagagactccttgtctcatgattttaatggcctaaatttaagcaaatac
attgcagaggctgtatcttctattgtggaagcgaagctgaaaatctctgatgtgaactgt
gctgtgcacttgtgctctctctttcaccagcgttatgctgactttgccccatcacttctt
caggtctggaaaaaacattttgaagcaaggaaagaggagaaaacgcctaacattaccaag
ttaagaactgatttgcgtttcatcgcagaattgacaatagttgggattttcactgataag
gaaggtctttccttaatctatgaacagctaaaaaatattattaatgccgatcgggaatcc
cacactcatgtttctgtggtgattagtttctgtcgacattgtggagatgatattgctgga
cttgtacctaggaaagtaaagagtgctgctgagaagtttaatttgaattttcctcctagt
gagataattagtccagagaaacaacaacctttccagaatcttttaaaagagtactttacg
tctttgaccaaacacctgaaaagggaccacagggagctccagaatactgagagacaaaac
aggcgtattctgcattctaaaggggagctaagtgaagatagacataaacaatatgaggaa
tttgctatgtcttatcagaagctgctggcaaattctcaatctttagcagaccttttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatgggcctggaatc
gatatatttacacctggtaaacctggagaatatgatttggaaggtggtatatgggaagat
gaagatgctcggaatttttacgagaacctcgttgatttgaaggcttttgttccggccatc
ttgtttaaagacaatgaaaaaagttgtcagaataaagagtccaacaaagatgattccaaa
gaggcaaaagaacctaaggataataaggaggtatcaagtcctgatgatttggaacttgag
ttggagaatctagaaattaatgacgacaccttagaactagaaggtggagacgaagctgaa
gatcttacaaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcactgga
tctcatctcaagctcatagtggatgctttcctccagcagttgcccaactgtgtcaaccga
gatctgatagacaaggcagcaatggatttttgcatgaacatgaacacaaaggcaaacagg
aagaagttggtccgggcactctttatagttcctcgacaaaggttggatttgctaccattt
tatgcaagattggttgctacattacatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acaaagaacaaaactgttcgttttattggagaactaactaagtttaagatgttcacaaaa
aatgatacactgcattgtttaaagatgcttctgtcagacttctctcatcatcatattgaa
atggcatgtaccctactggagacgtgtggacggtttcttttcagatccccagagtctcac
ctgaggaccagtgtacttctggagcaaatgatgagaaaaaagcaagcaatgcatctcgat
gcaagatatgttacaatggtagagaatgcatattactactgcaacccacctccagctgaa
aaaactgtgaaaaagaaacgacctcctctccaggaatacgtccggaaacttctgtacaag
gatctctctaaagttaccactgagaaggttttaagacagatgcgaaagttgccctggcag
gaccaagaagtgaaagactatgttatttgttgtatgataaacatatggaatgtgaaatat
aatagtattcattgtgtagccaacctcttagcaggactagtgctctaccaagaggatgtt
gggattcatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcaa
cctaaatttaatcagaggcgtatcagcagtgccaagttcttaggagaactttataattac
cgaatggtggaatcagctgttattttcagaactctttattcttttacttcatttggtgtt
aatcctgatggttctccaagttcactggaccctccagagcatcttttcagaattagacta
gtatgcactattttggatacctgtggccagtactttgacagaggttccagtaaacgaaaa
cttgactgcttccttgtatattttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacaaaagaccatccatttcctattgatatagattacatgatcagtgatacactagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtgcaa
gacttggaacgagaattcttaataaaactaggtaagcaattaatcacagatagaagacta
cataaagggctgaaacctgagaataatacacaattatatcgaagttttaacatctttgag
ggttctgataatgacgatgatgagggagaggaagaagaggaagagaatacagattacctt
acggattccaacaaggagaatgaaactgatgaagagaataccgaggtaatgattaaaggt
ggcggacttaagcacataccttgtgtagaagatgaggacttcattcaagctctggataaa
atgatgctagaaaatcttcagcaaagaagtggcgaatctgttaaagtgcaccaacttgat
gttgctattcctttgcatctcaaaagccagctgaggaaagggcccccgctgggtggtggg
gaaggtgaggcagagtctgcagacacgatgccatttgtcatgttaacaagaaaaggcaat
aaacagcagtttaagatcctcaatgtacccatgtcttcccaacttgctgcaaatcactgg
aaccaacaacaggcagaacaagaagagaggatgagaatgaaaaagctcacactagatatc
aatgaacggcaagaacaagaagattatcaagaaatgctgcagtctcttgcgcaacgccca
gctccagcaaacaccaatcgtgagcggcggcctcgttaccaacatccaaagggagcacct
aatgcagatctaatctttaagactggtgggaggtaa
DBGET
integrated database retrieval system
