Microcebus murinus (gray mouse lemur): 105860940
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Entry
105860940 CDS
T07238
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
mmur04142
Lysosome
mmur04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
105860940 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105860940 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
105860940 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmur02000
]
105860940 (NPC1)
Transporters [BR:
mmur02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
105860940 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
105860940
NCBI-ProteinID:
XP_012601559
Ensembl:
ENSMICG00000009311
LinkDB
All DBs
Position
19:63358932..63403174
Genome browser
AA seq
1293 aa
AA seq
DB search
MGARGPALGLLLLLCPAQVFLQSCVWYGECGIASGDKRYNCKYSGPPKPLPKDGYDLVQE
HCPGFFFDNVSLCCDVQQLRTLKDNLQLPLQFLSRCPSCFYNLLTLFCELTCSPRQSQFL
NVTATEDYVDPVTNQTRTNVKELQYYVGQSFANAMYNACRDVEAPSSNDKALGLLCGKDA
AACNATNWIEYMFNKDNGQAPFTITPIFSDLPLQGMEPMNNATKGCNESVDEGTGPCSCQ
DCSATCGPKPQPPPPLVPWRLFGLDAMYVIMWLTYMAFLLVFFGAFFAVWCYRKRYFVSE
YTPIDSNIAFSVNASDKGMSRLLTFTLPSSPALPGEASCCDPVGAAFEGCLRRLFTQWGS
FCVRNPGCVIFFSLVFIVACSSGLVFVRVTTNPVDLWSAPASQARLEKEYFDQHFGPFFR
TEQLIIRAPLTKKHTYEPYPSGADVPFGPPLDVEILHQVLDLQTAIENITASYNNETVTL
RDICLAPLSPYNENCTILSVLNYFQNSHSVLDHKVGDDFFVYADYHTHFLYCVRAPASLN
DTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVSNYYNDTEKLQRAQAWE
KEFINFVKNYKNPNLTISFSAERSIEDELNRESNSDVFTVLISYAIMFLYISLALGHIKS
CRRLLVDSKVSLGIAGILIVLSSVACSLGVFSYIGIPLTLIVIEVIPFLVLAVGVDNIFI
LVQTYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETIAFFLGALSMMPAVHTFSLFA
GLAVFIDFLLQITCFVSLLGLDIKRQEKNRLDILCCVRGAEDGTGVQASESCLFRFFKHS
YSPLLLKEWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQHLSMPDDSYVVDYLKSISQYLH
AGPPVYFVVEEGHDYTSPKGQNMVCGGVGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWID
DYFDWVKPLSTCCRVYNTSGQFCNASVADPACVRCRPLTPEGKQRPQGGDFMRFLPMFLS
DNPNPKCGKGGHAAYSSAVNILGSDTGVGATYFMTYHTVLQTSADFIDAMKKARLIASNI
TETMGTNGSSYRVFPYSVFYVFYEQYLTIIDDTVFNLGVSLGAVFLVAMVLLGCELWSAV
IMCATIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVA
RAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLVFLP
VLLSYIGPSINKAKSRATEDRYRGTERERLLNF
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgcgcggcccggccctcggcctcctgctgctgctctgcccggcgcaggtgttt
ttgcagtcctgtgtttggtatggagaatgtggaattgcgtctggggataagaggtacaat
tgcaaatattctggcccaccaaaaccattgccaaaggatgggtatgacttagtgcaggaa
cactgtccgggattcttctttgacaatgtcagtctctgttgtgatgttcagcagcttcgg
acactgaaagacaacctgcagctgcctctacagtttctatccaggtgtccatcctgtttt
tataacctactgaccctgttttgtgagctgacatgtagccctcgacagagtcagtttctg
aatgttacagcaactgaagattatgtcgatcctgttacaaaccagacaaggacaaacgtg
aaagagttacagtactatgttggacagagttttgccaatgcaatgtacaatgcctgccga
gacgtggaggccccttcaagtaacgacaaggccctgggactcctgtgtgggaaagacgct
gctgcctgcaatgccaccaactggattgagtacatgttcaataaggacaacggacaggca
ccgttcaccatcacccccattttttcagatcttccactccaagggatggagcccatgaat
aatgccaccaaaggctgtaatgagtctgtagacgagggcacagggccatgcagctgtcag
gactgctctgccacctgtggccccaagccccagcccccgccccctcttgttccctggagg
ctcttcggcttggacgccatgtatgtcatcatgtggctcacctacatggcattcttgctt
gtgttctttggagcattttttgcagtgtggtgctacagaaaacggtattttgtctctgag
tacacgcccattgatagcaacatcgccttttctgtgaatgccagtgataaaggaatgtca
cggctcttaaccttcaccctcccttcctctcccgcccttccaggggaggcgtcctgctgc
gacccggtgggcgcagcatttgagggctgtctgaggcggctgttcacacagtgggggtct
ttctgcgtccgaaaccctggctgtgtcattttcttctccctggtcttcattgtggcgtgt
tcgtcaggcctggtgtttgtccgggtcacgaccaatccagtggacttgtggtcggcccca
gccagccaagctcgcctggagaaagagtactttgaccagcactttgggcctttcttccgg
acagagcagctcatcatccgggccccgctcaccaaaaaacacacctacgagccctacccc
tcaggagccgacgtgccatttggacctccactcgacgtagagattttgcaccaggttctt
gacttacagacagccatcgaaaacattactgcctcttataacaatgaaactgtgacactt
cgggacatctgcttagcccctctgtcaccttataacgagaactgcaccattctgagtgtg
ttaaattacttccagaacagccattctgtgctggaccacaaagtaggggacgacttcttt
gtgtatgctgattaccacacacactttctgtactgtgtacgggcccctgcctctctgaat
gatacgagcttgctccatgatccctgtctgggaacatttggtggcccagtgttcccgtgg
cttgtgttaggcggctatgatgatcaaaactacaataacgccactgcccttgtgattacc
ttccctgtcagtaattactataatgatacagagaagctccagagggcccaggcctgggaa
aaagagtttattaattttgtgaaaaactacaagaatccaaatctgaccatttctttctct
gctgaacgaagtattgaagatgagctaaatcgtgaaagtaacagcgatgtcttcactgtt
ttaattagctatgccattatgtttctatatatttccctggccttggggcacatcaaaagc
tgccgcaggctcctggtggattcgaaggtctccctaggcatcgcgggcatcctgatcgtg
ttgagttcagtggcgtgctcgttgggtgtcttcagctacattgggatccccctgaccctc
atcgtgattgaagtcatcccattcctggtgctggctgtcggggtggacaacatcttcatt
ctggtgcagacctaccagagagatgaacgtcttcaaggggaaaccctggatcagcagctg
ggcagggtcctaggagaagtggctcctagtatgttcctgtcatccttttccgagactata
gcatttttcttaggagcactgtccatgatgccagccgtgcacaccttctctctgtttgcg
gggctggccgtcttcattgacttcctcctgcagattacctgcttcgtgagtctgttgggc
ttagacattaaacggcaagagaaaaatcggctagacatcctctgctgcgtccggggcgct
gaggatgggaccggcgtgcaggcctcggagagctgtctgtttcgcttcttcaaacactcc
tactcccccctgctgctgaaggagtggatgcggcccattgtgatagcagtatttgtgggt
gttctgtcatttagtattgcagtcctgaacaaagtagaaattggattggatcagcatctt
tcaatgccagatgactcctacgtggtggactatctcaaatccatcagtcagtacctgcac
gcgggtccacctgtgtactttgtcgtggaggaagggcatgactatacttctcccaagggg
cagaacatggtgtgcggcggcgtgggctgcaacaacgactccctggtgcagcagatattt
aacgcggcgcagctggacaactatacccggataggcttcgccccctcgtcctggattgac
gattatttcgactgggtaaagccactgtctacttgctgtagggtctacaataccagtggg
cagttctgcaatgcttcagtggctgaccctgcctgcgtccgctgcaggcctctgactccg
gagggcaaacagaggcctcagggtggagacttcatgaggttcctgcccatgttcctttct
gataaccccaaccccaagtgtggcaaagggggacatgctgcttacagctcggcagtgaac
atcctcggcagcgacacgggggtcggagccacgtacttcatgacctaccacaccgtgctt
cagacctccgccgacttcatcgacgctatgaaaaaagcccgactcatagccagtaacatc
accgagaccatgggcaccaatggcagcagctaccgtgtgttcccgtacagtgtgttttat
gtcttctacgaacagtacctgaccatcatcgacgacacggtcttcaacctcggcgtgtcc
ctgggagcagtatttctggtggccatggttctcctgggctgcgagctgtggtccgcggtc
atcatgtgtgccaccatcgccatgatcttggtcaacatgttcggagttatgtggctctgg
ggcatcagtctgaatgcagtgtccttggtcaacctggtgatgagctgtggcatctccgtg
gagttctgcagccacatcaccagagcgttcacggtgagcacgaaaggaagccgcgtggcc
cgcgcagaagaggcgctcgcccacatgggcagctccgtattcagtggaatcacacttaca
aagtttggcgggattgtggtgttggcctttgccaaatctcaaattttccagatattttat
ttccggatgtatttagctatggtgttactgggagccacgcatggcttagtatttctcccc
gtcttgctcagttacatagggccgtcaataaataaagccaaaagtcgtgccactgaagat
cggtatagaggcacagagcgagaacgactcctcaatttctag
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