Microcebus murinus (gray mouse lemur): 105862626
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Entry
105862626 CDS
T07238
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
105862626 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmur01009
]
105862626 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmur04515
]
105862626 (PCDH1)
Protein phosphatases and associated proteins [BR:
mmur01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105862626 (PCDH1)
Cell adhesion molecules [BR:
mmur04515
]
Cadherins
Protocadherins
105862626 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
105862626
NCBI-ProteinID:
XP_012604523
Ensembl:
ENSMICG00000017453
UniProt:
A0A8B7F9K8
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All DBs
Position
19:complement(34087197..34110581)
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AA seq
1237 aa
AA seq
DB search
MDNRAGGRRCPEAALLILGPAGMGPQRPSPGPGGQRLLLPPLLLALLLLLAPSPGHATRV
VYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL
RECQNQLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPEN
TNIGSLFPIPLASDRDAGPNGVASYDLQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDR
ERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI
QVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK
DRGANPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS
DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD
SGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFSENNKPGEVVAEVTASDADSGSNAE
LVYSLEPDPAAKGLFTISPETGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLV
NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVI
QNGTGTILSSLSFDREHQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN
TSHRLLTPQTRLGETVSQVTAEDFDSGVNAELTYSITGGNPYGLFQIGSHSGAITLEKEI
ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAG
DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK
PSGKASKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP
GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY
SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG
PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSS
PSRRTKNSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD
SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacaaccgggcgggcggccggcgctgcccagaggcggccctcctgatcctggggcct
gccgggatggggccccagaggcccagccccggccccgggggacaacggttgctgttgccc
cccttgctgctggcactgctgctcctgctggctccgtccccaggccacgccactcgggta
gtgtacaaggtgccggaggaacagccccccaacaccctcattgggagcctcgcagctgac
tatggttttccagacgtgggccacctgtacaaactagaggtaggtgccccgtaccttcga
gtggatggcaagacgggtgacattttcaccactgagacttccatcgaccgcgaggggctc
cgtgaatgccagaaccagctccctggtgagccctgcatcctggagttcgaggtgtctatc
acggacctcgtgcagaatggcagcccccggctgctagagggccagatagaagtacaggac
atcaatgacaacacgcccaatttcgcctcaccagtcatcaccctggccatccctgagaac
accaacatcggctcactcttccccatcccgctggcttcggaccgggacgctggtcccaac
ggcgtggcgtcctatgacctgcaggccgggcctgaggcccaggagctatttgggctgcag
gtggcagaggaccaggaggaaaagcagccacagctgatcgtgatgggcaacctggaccgc
gagcgctgggactcctatgatcttaccatcaaggtgcaggatggtggcagccccccacgc
gccagcagtgccctactgcgtgtcaccgtgcttgacaccaatgacaacgcccccaagttc
gagcggccctcctatgaggctgaactctcggaaaatagccctataggacactcggttatc
caggtgaaggccaatgactcggaccaaggtgccaatgcagagatcgactacacgttccat
caggcgcccgaagttgtgaggcgccttctgcgactggacaggaacactggacttatcact
gtccagggcccggtggaccgtgaggacctaagcaccctgcgcttctcggtgcttgccaag
gaccgaggtgccaaccccaagagtgctcgtgcccaggtggttgtgaccgtgaaggacatg
aatgacaatgcccccaccattgagatccggggcatagggctggtgactcatcaagatggg
atggctaacatctcagaggacgtagcggaggagacggctgtggccctggtgcaggtatct
gatcgagacgagggagagaatgcagcagtcacctgtgtggtggcaggtgatgtgcccttc
cagctacgccaggctagtgagacgggcagcgacagcaagaagaagtatttcctgcagacc
actaccccgcttgactacgagaaggtcaaagactacaccatcgagattgtggctgtggac
tccggcaaccccccgctctctagcaccaactccctcaaggtgcaggtggtggacgtcaac
gacaacgcgcctgtcttcactcagagcgtcactgaggtggccttctcagaaaacaacaag
cctggagaagtggtcgcggaggtcaccgccagtgatgctgactccggctccaatgccgag
ctggtttactctctggagcccgacccagccgccaagggcctcttcaccatctcacccgag
acgggagagatccgggtgaagacatccctggatcgcgagcagcgggacagctacgagttg
aaggtggtggcagctgaccggggcagccccagcctccagggcacagccactgtcctcgtc
aatgtgctggactgcaatgacaatgaccccaaatttatgctgagtggctacaacttctca
gtgatggagaacatgccagcgctgagtccagtgggcatggtgactgtcattgatggagac
aagggggagaatgcccgggtccagctctctgtggagcaggacaatggtgactttgttatc
cagaatggcacaggcaccatcctctccagcctgagcttcgaccgagagcaccaaagcacg
tacaccttccagctgaaagcagtggacggtggcgtcccacctcgctcagcttatgttggc
gtcactatcaatgtgctggatgagaatgacaatgcaccctttatcaccgccccctccaac
acctcccaccggctgctgaccccccagacacgtcttggtgagacggtcagccaggtgaca
gccgaggactttgactctggtgtcaatgctgagctgacctacagcatcactggtggcaac
ccttatggactcttccagattgggtcacattcaggtgccatcaccctggagaaggagatt
gagcggcgccaccatgggctacaccgcctagtggtgaaggtcagtgaccgtgggaagccc
ccacgttatggcacggccttggtccacctttatgtcaatgagaccctggccaaccgcaca
ctgctggagaccctcctgggccacagcctggacacgccgctggatatcgacattgctggg
gacccggaatatgagcgctccaagcagcgtggcaacatcctctttggtgtcgtggccggt
gtggtggccgtggccctgctcatcgccctggcagtgttggtgcgctactgccggcagcgg
gaggccaagagtggctaccaggctggtaagaaggagaccaaggacctgtacgcccccaag
cccagcggcaaagcctccaagggaaacaaaagcaagggcaagaagagcaaatccccgaag
cccgtgaagccggtggaggatgaggatgaggccgggctgcagaagtccctcaagttcaac
ttgatgagtgatgcccctggggacagtccccgcatccacctgcccctcaactacccacca
ggcagccctgacctgggccgccactaccgctccaactccccactgccttccatccagctg
cagccccagtccccctcggcctccaagaagcaccaggtggtacaggacctgccgcctgca
aacacatttgtgggcacgggggacaccacgtccacgggctctgagcagtactccgactac
agctaccgcaccaatccccccaaataccccagcaagcagttacctcaccgccgtgtcacc
ttctcggccaccagccaggcccaggagctgcaggacccatcccagcacagctactatgat
agtggcctggaggagtctgagacgccatccagcaagtcatcctcggggcctcgactgggc
cccctggccctgcctgaggatcactacgagcgcaccacgcccgacggcagcataggagag
atggagcaccccgagaatgacctccgccctttgcctgatgtcgccatgacgggcacctgt
acccgggagtgcagcgagtttggccactccgacacgtgctggatgcctggccagtcgtct
cccagccgccggaccaagaacagcgccctcaaactctccaccttcgtgccttaccaggac
cgaggagggcaggagcctgcaggcgccggcagccccagccccccggaagaccggaacacc
aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat
tcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttccca
cccgcggccacaccggcatctgcccagacggccaagcgcgagatctacctgtga
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