Microcebus murinus (gray mouse lemur): 105862676
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Entry
105862676 CDS
T07238
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
mmur
Microcebus murinus (gray mouse lemur)
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmur04131
]
105862676 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmur04147
]
105862676 (COPA)
Membrane trafficking [BR:
mmur04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
105862676 (COPA)
Exosome [BR:
mmur04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105862676 (COPA)
Exosomal proteins of bladder cancer cells
105862676 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
105862676
NCBI-ProteinID:
XP_012604608
Ensembl:
ENSMICG00000013972
UniProt:
A0A8B7F9A9
LinkDB
All DBs
Position
2:116175722..116217185
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIAGKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPELDVPSGAVG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CKVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagctttcaccccaaa
agaccctggatcctgactagtttacacaatggggtcatccagctatgggattatcggatg
tgcactctcattgacaagtttgatgaacatgatggtccagtgcgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcggtgtctcttcacattgcttgggcacttagattatattcgcactaccttt
tttcatcatgagtatccttggattctgagtgcctcagacgatcaaaccatccgagtgtgg
aactggcaatctagaacctgtgtctgtgtgttaacggggcacaaccattatgtaatgtgt
gctcagtttcatccctcagaagacttagttgtatcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgcggtggagtcggat
gtgagaggaattactggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagtaaactgggctgccttccaccccactatgccccttatt
gtatctggggcagatgaccgtcaggtgaagatctggcgtatgaatgaatcaaaggcatgg
gaggttgatacctgccggggccattacaacaatgtatcctgtgctgtcttccaccctcgc
caagagttgatcctcagcaattctgaggacaagagtatccgagtctgggatatgtctaag
cggactggggttcagaccttccgtagggaccatgatcgtttctgggtcctagctgctcac
cctaaccttaacctctttgcagcaggccatgatggtggcatgattgtgtttaagctggaa
cgggaacggccagcctatgctgttcatggcaatatgctgcattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccagtattcaatatgtcatacaatccagcagaaaatgcagtcctactctgt
acgagagccagcaatttagaaaatagtacctatgatctgtacaccattcccaaggacgct
gactcccagaaccctgatgcccctgaagggaaacgatcctcaggcctgacagccgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttcttatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgtgatgagatcttctatgctggc
acaggcaacctcctgcttcgagatgcagactctatcacactctttgatgtgcagcagaag
cggactctggcatccgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcacatgtagcactactagccaaacatgccattgtgatctgtaaccgcaaactggatgct
ctgtgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgctgtcaccactggggaccatggaatc
attcgaactctggatttacccatctatgtcacacgagtgaagggcaacaatgtatattgc
ctagatagggagtgtcgtcctcgggtacttaccattgatcccactgagttcaaattcaag
ctggctctgatcaacagaaaatatgatgaggtactgcacatggtgaggaatgccaaatta
gtaggccagtctattattgcttatctccagaagaagggctatcctgaagtggcactgcat
tttgtcaaggatgagaaaactcgctttagtctggcgctggagtgtggaaacattgagatt
gctctggaagcagccaaagcactggatgataagaactgctgggaaaagctgggagaagtg
gccctgctacaggggaaccaccagattgtggaaatgtgctatcagcgtaccaaaaatttt
gacaaactttccttcttgtaccttatcactggcaacctagagaaacttcgcaagatgatg
aagattgctgagatccgaaaggacatgagtggccattatcagaatgccctatacctgggt
gacgtgtcagagcgagtacggatcctaaagaactgtggacagaagtccctggcctatctc
acagctgctacccatggcttagatgaagaagctgagagcttgaaggagacatttgaccca
gagaaggagacaatcccagacattgaccctaatgccaagctgcttcagcctcctgcacct
atcatgccattagataccaattggcctttattgactgtgtccaaaggattctttgaaggc
tccattgccggcaaggggaagggaggagcactggctgctgacattgacattgacactgtt
ggtactgagggctggggagaagatgcggagctgcagctggatgaagatgggtttgtggag
gccacagaaggtttgggggatgatgctcttgggaaaggacaggaagaaggaggtggctgg
gatgtagaagaggatctagagctccctcctgagctggatgtaccctctggggcagtgggt
ggggctgaagatggattctttgtgccaccaaccaagggaacaagccccactcagatctgg
tgcaataactctcagcttccagttgatcacatcctggcaggctcttttgaaacagccatg
cggctccttcatgaccaggtaggggtaatccagtttggcccctacaagcagctgttccta
cagacatatgcccgaggccgtaccacctatcaggctctgccctgcctgccttccatgtat
ggctaccctaatcgtaattggaaggatgcagggctaaagaatggtgtaccggctgtgggc
ctgaagcttaatgacctcatccaacggttgcagctgtgctaccaactcaccacagttggc
aagtttgaggaggctgtggaaaaattccgttccatcctcctgagtgtgccacttcttgtt
gtggacaataagcaggagattgcagaggcccagcagctcatcactatttgccgcgagtac
attgtgggtttgtcgatggagatagaaaggaagaagctgcccaaagagactctagaacag
cagaagcgcatctgtgagatggcagcctatttcacccactcaaacctgcagcctgtgcac
atgatcctggtgctgcgtacagccctcaacctcttcttcaagctcaagaacttcaagaca
gctgccacctttgctcggcgcctgctggaacttggtcccaagcctgaggtggctcaacag
acccgaaaaatcctgtcagcctgtgagaagaaccccacagatgcctaccagctcaattat
gacatgcacaaccccttcgacatctgtgctgcatcttatcggcccatctaccgtggaaag
ccagtagagaagtgtccgctcagcggggcctgctattcccctgagttcaagggtcagatc
tgcaaagtcactacagtgacagagattggcaaagatgtgattggtctaaggatcagtcct
ctgcagtttcgctaa
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integrated database retrieval system