Microcebus murinus (gray mouse lemur): 105864192
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Entry
105864192 CDS
T07238
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04151
PI3K-Akt signaling pathway
mmur04382
Cornified envelope formation
mmur04510
Focal adhesion
mmur04512
ECM-receptor interaction
mmur04518
Integrin signaling
mmur04820
Cytoskeleton in muscle cells
mmur04926
Relaxin signaling pathway
mmur04933
AGE-RAGE signaling pathway in diabetic complications
mmur04974
Protein digestion and absorption
mmur05146
Amoebiasis
mmur05165
Human papillomavirus infection
mmur05200
Pathways in cancer
mmur05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105864192 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105864192 (COL4A1)
04518 Integrin signaling
105864192 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105864192 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105864192 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
105864192 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
105864192 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
105864192 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105864192 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
105864192 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
105864192 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
105864192 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
105864192 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmur04147
]
105864192 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
mmur00536
]
105864192 (COL4A1)
Exosome [BR:
mmur04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105864192 (COL4A1)
Glycosaminoglycan binding proteins [BR:
mmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105864192 (COL4A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105864192
NCBI-ProteinID:
XP_012607324
Ensembl:
ENSMICG00000042757
UniProt:
A0A8C5Y9Y9
LinkDB
All DBs
Position
13:4686577..4829693
Genome browser
AA seq
1669 aa
AA seq
DB search
MGPRLGVWLLLLLAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGKKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGTLLKGERGFPGL
PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGSGYKGPKGEKGEQGVSGPP
GVPGQAQAKEKGDFATKGEKGQKGEPGFQGMPGIGEKGEPGKPGPRGKPGKDGEKGERGS
LGFPGDSGYPGLPGRQGPPGEKGEVGPPGPPGIVIGTGPLGEKGERGYPGAPGLRGEPGP
KGFPGLQGQPGPPGFPVPGQAGAPGFPGERGEKGDQGFPGESLPGPSGRDGLPGPPGPPG
PPGQPGHTNGIVECQPGPPGDQGPPGTPGHPGLSGEVGEKGQKGDSCLICDTTGLRGPPG
PQGPPGEIGFPGQPGPKGDRGLPGRDGLEGLPGPQGTPGLMGHPGAKGEPGEIYFDLRLK
GDKGDPGFPGQPGIPGRAGSPGRDGHPGLPGPKGSPGSIGLKGERGPPGGLGFPGSRGDT
GPPGPPGFGPIGPTGDKGQAGLPGGPGLPGLPGPKGEAGRVVPLPGPPGAEGLPGSPGFQ
GPQGDRGFPGTPGRPGLPGEKGATGQPGIGFPGPPGPKGVDGLPGDVGAPGSPGRPGFNG
LPGSPGLQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGNIGAAGVPGEHGAIGPPGLQGT
RGDPGPPGLPGPAGSPGAPGLGPPGVRGPPGGQGPPGASGPPGIKGEKGFPGFPGLDMPG
PKGDKGAQGLPGLTGQSGLPGLPGQQGTPGIPGFPGPKGEMGVMGTPGQPGSPGPAGAPG
LPGVKGEHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG
PAGEKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPG
SPGEKGVPGIPGLQGVPGLPGEKGSKGEKGQSGPPGIGIPGLPGTKGDQGVAGFPGSPGE
KGEKGSTGIPGMPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIQGVKGEAGLPGK
PGPTGPAGQRGERGSDGIPGPAGEKGEPGLPGRGFPGFPGTKGDKGSKGDVGFPGLAGSP
GIPGPKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPMGPQGLPG
LDGLKGDKGQPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQKG
LPGLQGVKGDQGDQGIPGPKGLPGLPGPPGPYQTIKGEPGLPGPEGPPGLKGLQGPPGPK
GQQGVTGSVGVPGPPGIPGFDGAPGQKGETGPFGPPGPRGLPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPTGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSDMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccgcggctcggggtctggctgctgctgctgctcgccgccctcctgctccacgag
gagcgcagccgggccgctgcgaagggtggttgtgctggctctggctgtggaaaatgtgac
tgccatggagtgaagggacaaaagggagagagaggtctccccgggttacaaggtgtcatt
gggtttcctggaatgcaaggacctgaggggccgcagggaccacctggaaaaaagggtgac
actggagagccaggactacctggaacaaaagggacaagaggacctccaggagcatctggt
taccctggaaacccaggtcttcctggtattcctggccaagatggcccaccaggtccccca
ggcatcccgggatgcaacggcacaaagggggagagagggccgctgggacctcctggtttg
cctggattcgctggaaatcctggaccaccggggttgccaggaatgaagggggacccaggt
gaaatacttggccatgtgcctgggaccctgctgaaaggtgaaagaggattccccggactt
cctggagcgcccggttccccaggattgccagggctacaagggcctgtcggccctccagga
tttaccggaccaccaggtcccccaggtcctcctggccccccaggtgaaaagggacaaatg
ggctcaggttataaaggaccaaagggtgaaaagggtgaacaaggagtcagtgggcctcca
ggagtaccaggacaagctcaagctaaagaaaaaggagactttgccaccaagggagagaag
ggtcaaaaaggtgaacctggatttcagggaatgccaggaattggtgagaaaggtgaaccc
ggaaaaccagggccccgaggaaagcctggcaaagatggtgaaaaaggagaaagagggagt
ctcggttttcctggagattcggggtatccaggactccccggccggcagggtcctccggga
gaaaaaggtgaagtaggtcctccgggcccacctggaattgttattggcacaggacctctg
ggagagaaaggagagcggggctacccaggagctccggggctgagaggagagccaggcccg
aaaggtttcccaggactacaaggccaaccaggccctccaggcttccctgtgcctgggcag
gctggtgcccccggcttccctggtgaaagaggagaaaaaggtgaccaaggatttccagga
gaatctttgccaggaccaagtggaagggatgggcttccaggccctccaggtccccccgga
ccccctgggcagcccggccacaccaatgggattgtggagtgtcaacctggacccccaggt
gatcagggaccccctggaactccagggcatccgggcttgtcaggcgaagttggagagaaa
ggtcaaaaaggagatagttgcctcatctgtgatacgacaggactccgtggtccccctggg
ccacagggacccccaggagaaataggtttcccaggacagccagggcccaagggcgacaga
ggtttacctggcagggatggtcttgaaggattgcctggcccgcaaggcacgcccgggctg
atgggccatcccggagccaagggagaacctggcgagatctattttgacctgcggctcaag
ggtgacaaaggagaccccggttttccaggccagcccggcattccagggagagcagggtct
cctggaagagatggccatccaggtcttcccggccccaaaggctccccgggctccatagga
ctgaaaggagaacgtggcccccctggaggactgggattccccggcagtcgtggtgacacc
ggcccccctgggcctccaggatttggtcctatcggccccactggtgacaaaggacaagcg
ggccttcccgggggccctgggttgccaggcctgccaggtccaaagggtgaggcaggaaga
gtcgttccccttccaggcccccctggagcagaaggacttccaggatccccaggtttccaa
gggcctcaaggtgaccgaggctttccgggaaccccaggaaggccaggccttccaggagag
aagggcgctacaggccagccggggatcggatttccagggccccctggccccaaaggtgtc
gatggcctacctggagatgtgggcgcccctgggagtccaggtcgcccaggatttaatggc
ttacctggcagcccgggtttgcagggccaaaagggggagcctggagttggtctaccagga
ctcaaagggttgccaggtcttcctggcattcctggcacacctggggagaaggggaacatc
ggggccgcaggcgttcctggagaacacggagccatcggccctcctgggctgcagggaacc
agaggtgaccctggacctcctggattgccgggcccggcaggatctccaggagctccggga
ttaggcccccctggagttaggggcccccctggaggacagggacccccaggggcatcaggt
cctcctggaataaaaggagagaagggtttccccggattccccggactggacatgcctggc
cctaagggagataaaggtgctcaaggacttcctggcttaacaggacagtcggggctccct
ggccttcctggacagcaggggacacctggaatccctgggtttccaggtcccaagggagag
atgggcgtcatggggacccccgggcagccgggctcgccgggaccagcaggtgctccagga
ttaccaggtgtaaaaggggagcatggcttcccgggttcctcgggacccaggggagaccct
ggcttcaaaggtgacaagggggacgtcggtctccccggcaagcctgggtccatggacaag
gtggacatgggcagcatgaagggacagaagggagaccagggagagaaaggacaaattgga
ccagctggtgaaaagggatcccggggagaccctgggaccccaggagtgcctggaaaggac
gggcaggcggggcaccctggacagccaggacccaaaggcgacccaggtataagtggaacc
ccaggtgcccctggacttcctggaccaaaaggatctgttggtggaatgggcttgccagga
agccccggagaaaaaggtgtgcctggcatccccggcctgcagggcgtccccggcttacct
ggagagaaaggctcaaagggagagaaagggcagtcaggccctcctggcattggcattcct
gggctgcccgggaccaagggcgatcaaggagtggcgggtttccccggcagccctggagag
aagggagaaaaggggagcacggggatccctgggatgccggggtctccaggcccaaagggg
tctccggggagcgtcggctacccaggaagccctgggctgcccggagaaaaaggagacaaa
ggcctcccgggactggatggcattcagggcgtcaaaggagaagcaggtctcccggggaag
cccggccccacgggcccagctggccagagaggggagcgcggcagcgacggaatcccgggg
ccggcgggagagaagggtgaaccaggtctaccaggaagaggattcccagggtttccaggg
accaaaggagacaaaggttccaagggtgacgtgggtttcccaggattagctggaagccca
ggaattcctggacccaaaggagaacaaggatttatgggtcctccggggccgcaaggacag
ccaggcctgcctggtgctccgggacacgctgtggaggggcccaaaggagatcggggaccc
cagggacagcccggcctgccagggcttccgggacccatggggcctcaagggctccccggg
cttgatggactgaaaggcgataaaggacaacccggctggccaggagcccctggtgttcca
gggcccaagggcgacccaggattccagggcatgcctggtatcggtggctctccaggaatc
acaggttctaagggtgatatgggaccaccgggagttccaggatttcaaggtcagaaaggt
cttcctggcctccagggagtgaaaggagaccaaggagatcaaggaatccctggacctaaa
ggtctcccggggctccccggccccccaggcccttaccagaccatcaaaggggagccaggg
cttcctggtcctgagggacccccaggtctgaaagggcttcagggacctccgggccctaaa
ggacagcaaggtgtgacgggatcggtgggtgtccccggacctccaggtattcccgggttt
gacggtgcccctggccagaaaggagagacaggacccttcgggcctcccggtccaagaggg
cttcccggtcccccgggcccggatgggttgccagggtccatggggcccccaggtacccca
tctgtcgatcacggcttcctcgtgaccaggcacagtcaaaccatagacgacccacagtgc
ccccccgggaccaagatcctttatcacgggtactctctgctctacgtgcaaggcaatgaa
cgggcgcacggccaggacttgggcacggccggcagctgtctgcgcaagttcagtacgatg
cccttcctgttctgcaacatcaacaatgtgtgcaacttcgcatcccggaatgattattcg
tactggttgtctactcctgagcccatgccgatgtccatggcacccatcgctggggacaac
attagaccatttattagtaggtgtgccgtgtgcgaggcgcccgccatggtgatggctgtg
cacagtcagaccattcagatcccgccgtgccccactgggtggtcatcgctgtggattggc
tactcctttgtgatgcacaccagcgccggtgccgaaggttctggccaagccctcgcgtcc
cccgggtcctgtctggaagagttcagaagtgcaccattcatcgagtgccatggccgtggg
acttgcaattactatgcaaatgcttacagcttctggcttgccactatagagagaagcgat
atgttcaagaagcccacgccgtccaccttgaaggcaggggagctgcgcacgcacgtcagc
cgctgccaagtctgtatgagaagaacatga
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