Microcebus murinus (gray mouse lemur): 105864949
Help
Entry
105864949 CDS
T07238
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105864949 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmur03041
]
105864949 (CDC40)
Spliceosome [BR:
mmur03041
]
Complex C
Other components
Step II factors
105864949 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WDR55
EIF3I
WD40_WDHD1_1st
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_ACSF4
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
105864949
NCBI-ProteinID:
XP_012608614
Ensembl:
ENSMICG00000016200
UniProt:
A0A8B7FKK8
LinkDB
All DBs
Position
6:complement(69820873..69868049)
Genome browser
AA seq
579 aa
AA seq
DB search
MSAAIAALAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEDEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgattgcagctctggccgcttcctatggttcgggttcagggtccgagtcg
gactcggacagtgagggcagtcggtgtcctctgccagccgccgactcgcttatgcacttg
actaagtcgccttcggccaagccctctctagctgtggcagtggactcggctcccgaggtg
gcagttaaggaagatttagagactggagttcaccttgaccctgctgtaaaagaagttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccgtttagg
acacagcaaatggctgcccctagaaatatgctttctggatatgctgaaccagctcatatc
aatgattttatgtttgaacaacaaagaagaacttttgccacatatggttatgcattagac
ccttcattagataatcatcaagtgtctgctaaatatattggttctgtagaagaagctgaa
aaaaatcaaggtttaactgtgtttgaaactggtcagaagaaaatagaaaagaggaaaaag
ttcaaagaaaatgatgcatctaatattgatggtttcttgggaccatgggcaaaatatgta
gatgaaaaagatgtagccaaaccttcagaggaagaacaaaaagaattggatgaaatcaca
gcaaagaggcagaaaaaaggcaaacaggaagatgagaaacctggggaggagaagacaatc
ttacatgttaaagaaatgtatgactatcaaggcaggtcctatcttcacatacctcaggat
gttggtgttaatctacggtcaactgtgccacctgagaagtgttaccttcccaagaaacaa
attcatgtgtggtctggacacacaaagggggtcagtgcagtcagattgtttcctctctcc
ggccatttattgctctcttgttccatggactgtaaaatcaagctatgggaggtttacgga
gaccggcgctgtttgcgaacatttattggtcacagtaaagctgttagggacatctgcttt
aatactgcaggaacacaattcctcagcgcagcatatgacaggtatctgaagctctgggac
actgagacaggacagtgtatatcaagatttacaaaccgaaaagtgccctattgtgtcaaa
ttcaatcctgatgaagataagcaaaatctctttgtggctgggatgtcggataagaagatt
gtgcaatgggacattcgaagtggagaaattgtgcaggaatatgatcggcatttgggagct
gtcaacaccattgtttttgttgatgagaataggagatttgtgagcacatctgacgacaag
agcctaagagtttgggaatgggatatcccggtggatttcaagtatatagcagaacccagt
atgcattcaatgcctgcagtgactttgtctccaaatggcaagtggctagcatgccaatcc
atggacaaccaaatcttaatttttggagcacagaacagatttagattaaataagaaaaaa
atttttaagggccacatggtagcaggttatgcttgtcaagtggacttttcaccagacatg
agctatgtgatttcaggagatggaaatggaaaattaaacatttgggactggaagaccaca
aaactctacagtcggtttaaagctcatgataaagtgtgtataggtgcagtgtggcatcct
catgaaacatctaaggtcataacatgtggttgggatggtctcattaaattgtgggattaa
DBGET
integrated database retrieval system
