Microcebus murinus (gray mouse lemur): 105865821
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Entry
105865821 CDS
T07238
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04151
PI3K-Akt signaling pathway
mmur04510
Focal adhesion
mmur04512
ECM-receptor interaction
mmur04974
Protein digestion and absorption
mmur05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105865821 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105865821 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105865821 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105865821 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
105865821 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mmur00536
]
105865821 (COL2A1)
Glycosaminoglycan binding proteins [BR:
mmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105865821 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
105865821
NCBI-ProteinID:
XP_012610160
Ensembl:
ENSMICG00000009035
UniProt:
A0A8B7FN96
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Position
7:62343401..62374006
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AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCQGQDVQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDVKDCLNPEIPFGECCPICPTDLATASGPPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRAGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPTGLAG
PKGANGDPGRPGEAGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGIKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGAPGEKGEPG
DDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAG
PTGKQGDRGESGAQGPMGPSGPAGARGLPGPQGPRGDKGESGEPGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADEAASSLRQHDVEVDATLK
SLNNQIENIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPVSVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEVAGNLKKALLLQGSNDVEIRAEGNSRFTYTTLKDGCTK
HTGKWDKTVIEYRTQKTSRLPIIDIAPVDIGGPEQEFGVDIGPACFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgttggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcagggccaggatgtccaggaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagatgtgaaagactgcctcaaccctgagatc
cccttcggagagtgctgccccatctgcccaactgacctcgccactgccagtgggccacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaggga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggcgatcgtggtgacaaa
ggtgaaaaaggtgctcctggacctcgtggcagagatggagagcctgggacccctggaaat
cctggcccccctggtcctcccggccctcctggcccccctgggcttggtggaaactttgct
gcccagatggctggtgggtttgatgagaaggctggtggtgcccagatgggagtgatgcaa
ggacctatgggccccatgggacctcgaggacctccaggccctgctggtgctcctgggcct
caaggatttcaaggcaatcctggtgaacctggtgaacctggcgtctctggtcctatgggt
ccccgtggtcctcctggcccccctggaaaacctggtgatgatggcgaagctggaaagcct
ggaaaagctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccaggaacc
ccaggccttcctggcgtcaaaggtcacagaggttacccaggtctagatggtgctaaggga
gaagctggtgccccaggcgtgaagggtgagagtggttcccctggtgagaatggttctccg
ggcccaatgggtccccgtggcctgcctggtgaaagaggacgagctggacctgccggtgct
gcgggtgcccgcggcaacgatggccagccaggccccgcagggcctccgggtcccgtcggt
cccgctggcggtcctggcttccctggtgctcccggagccaagggtgaagctggccccact
ggtgcccgtggtcctgaaggcgctcaaggtcctcgcggtgaacctggtactcctgggtcc
cctgggcctgctggtgcctctggtaaccctggaactgatggaattcctggagccaaagga
tctgctggcgcgcctggcatcgctggtgctcctggtttccctgggccccgtggtcctccc
ggccctcaaggtgcaactggtcctctgggcccgaaaggtcagacgggtgaacctggcatt
gctggcttcaaaggtgaacaaggccccaagggagaacctggccctgctggcccccaggga
gcccctggccctgctggtgaagaaggcaaaagaggcgcccgtggggagcctggcggcgct
gggcccattggtccccccggagaaagaggtgctcctggcaaccgtggtttcccaggtcag
gatggtctggcaggtcccaagggagcccctggagagcgagggcccactggccttgctggt
cccaagggcgccaatggtgaccctggccgtcctggagaagctggccttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggcccttctggagcc
cctggtgaagatggtcgccctggacctccaggtcctcagggggctcgtgggcaacctggt
gtcatgggtttccctggccccaaaggtgccaatggcgagcctggcaaagctggtgagaag
ggactgccgggtgctcctggtctgagaggtcttcctggcaaagatggtgagaccggtgct
gcaggaccccccggccccgctggacctgctggtgaacgaggcgagcagggtgctcctggg
ccatctggtttccagggacttcctggccctcccggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgttcccggcgaagctggagcccccggcctcgtgggtcccaggggcgaa
cgaggcttcccgggtgaacgcggctctcctggtgcccagggcctccagggtgcccgcggc
ctccctggcactccaggcactgacggtcccaaaggtgcatctggcccagctggcccccct
ggggctcagggtcctccaggtcttcagggaatgcccggcgagaggggagcagctggtatc
gctgggcccaagggagacaggggtgatgttggtgagaaaggaccggaaggagcccctgga
aaggacggtggacgcggtctgactggtcccattgggccccctggcccggctggcgccaat
ggcgagaagggagaagttggaccccctggtcctgcgggaagtgctggtgctcgaggcgct
ccgggtgaacgtggggagactgggccccccggcccagctggattcgccggccctcccggt
gctgacggccagcctggcatcaaaggcgagcaaggagaggccggccagaagggtgacgct
ggcgcccctggtcctcagggtccctctggagctcctgggcctcagggtcctactggagtg
actggtcctaaaggagcccgcggtgcccaaggccccccgggagccactggattccccgga
gctgctggccgcgttggacctcccggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggcccccccggcaga
gctggtgaccctggcctccaaggtcctgctggggcccctggcgagaagggagaacccgga
gatgatggtccctctggtgccgacggtcctccaggtccccagggtctggctggtcagagg
ggcattgttggtctgcctgggcagcgtggagagagaggattccccggcctgcccggcccg
tcgggtgagcccggcaagcagggagcgcctggtgcttctggagacagaggtcctcctggc
cccgtgggtcctcctgggctgactggccctgcaggtgaacctggacgagagggaagcccc
ggtgcagatggcccccctggcagagatggggcagctggagtcaagggcgatcgtggcgag
accggtgccttgggtgctcccggagcccctgggccccctggctctcctggccctgccggc
ccgactggcaaacagggagacagaggagaatctggcgcacagggccccatgggaccctca
ggaccagctggagcccggggactcccaggccctcaaggcccccgaggagacaaaggagag
tctggagagcctggcgagaggggcctgaagggacaccgtggcttcactggcctgcagggc
ctgcctggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcccggccccgtcggtccctctggcaaagatggtgctaacggaatc
cctggccccatcgggcctcctggtccccgtggacgttcaggcgaaactggtcctgctggt
cctcctgggaatcctggaccccctggccctccaggtccccctggccctggcatcgacatg
tccgccttcgccggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg
gctgacgaggcggccagctccctgagacagcatgacgtcgaggtggatgccacacttaag
tccctcaacaaccagatcgagaacatccgcagccctgagggctcccgcaagaaccctgca
cgcacctgccgggacctgaaactctgccaccctgagtggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaatcctgtgagcgtgcccaagaagaactggtggagcagcaag
agcaaggagaagaaacacatctggtttggggagaccatcaacgggggcttccatttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg
ctgtccacggagggctcccagaacatcacctaccactgcaagaacagtattgcctacctg
gacgaagtagctggcaacctcaagaaggccctgctcctccagggctccaacgacgtagag
atccgggcagagggcaacagcaggttcacatacaccaccctgaaggatggctgcacgaaa
cacaccggtaagtgggacaagactgttatcgagtaccggacacagaagacctcacgcctc
cccatcattgacattgcacccgtggacataggagggcctgagcaggaatttggtgtggac
atagggccagcctgcttcttgtaa
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