Microcebus murinus (gray mouse lemur): 105867222
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Entry
105867222 CDS
T07238
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
105867222 (SCN1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmur04040
]
105867222 (SCN1A)
Ion channels [BR:
mmur04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105867222 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
PFF1_TM
RskA_C
FraC
Motif
Other DBs
NCBI-GeneID:
105867222
NCBI-ProteinID:
XP_012612496
Ensembl:
ENSMICG00000004920
UniProt:
A0A8B7FUD2
LinkDB
All DBs
Position
8:65442423..65592617
Genome browser
AA seq
2008 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKNDDENGPKPNSDLEAGKNL
PFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKIA
IKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLE
DFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNTSLEEHSIEMNITVDYN
GTFVNETVIEFDWKSYIQDSRYHYFLEGFPDALLCGNSSDAGQCPEGYVCVKAGRNPNYG
YTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAV
VAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAATVTASEHSREPSAAGRLSD
SSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEGN
RLTYEKRYSSPHQSLLSIRGSLFSPRRSSRTSLFSFRGRAKDVGSENDFADDEHSTFEDN
ESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPSNGKMHSTVDCNGVVSLVGGPSVPT
SPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASILT
NTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLN
TLFMAMEHYPMTAHFNHVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVT
LSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIV
FIFAVVGMQLFGKSYKDCVCKISSDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCME
VAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHK
GIAYVKRKIYEFIVQSFVRKQKILDEIKPLDDLNNRKENCMSNHTTEIGKDLDYLKDVNG
TTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEES
KEKLNESSSSSEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEEGRG
KQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTY
IFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRAL
RPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTT
GDRFDINEVNNHTDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAA
VDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVE
TDDQSEHVTSILARINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFL
AELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDC
DPNKANPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLS
EDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDR
IHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAVI
IQRAYRRHLLKRTVKQASFIYNKNKLKGGANLLVKEDMIIDRINENSITEKTDLTMSTAA
CPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcagctattgaaagacgcattgcagaagaaaaggctaagaatcccaaaccagac
aaaaatgatgatgaaaatggcccaaagccaaatagtgacttggaagctgggaagaacctt
ccatttatttatggagacattcctccagggatggtgtcagagcccttggaggacctggat
ccatactatatcaataaaaaaacttttatagtattgaataaagggaaggccatcttccgg
ttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaatagct
attaagattttggtacattcattattcagcatgctaattatgtgcactattttgaccaac
tgtgtgtttatgacaatgagtaaccctcccgactggacaaagaatgtagagtacaccttc
acaggaatatatacttttgaatcacttataaaaattattgcaaggggcttctgtttagaa
gattttactttccttcgagatccatggaactggctcgatttcactgtcattacatttgca
tatgtgacggagtttgtggaccttggcaatgtctcagcgctgagaacattcagagttctc
cgagcattgaaaacaatttcagtcattccaggcctgaaaaccattgtgggagccctgatc
cagtcagtgaagaagctctcagatgtaatgatcctgactgtgttctgtctgagcgtgttt
gcactaatcgggctgcagctcttcatgggcaacctgcggaataaatgtgtccagtggcct
cccaccaatacttccctggaggaacacagtatagagatgaatataactgtggattacaat
ggcacatttgtaaatgaaactgtcattgagtttgactggaaatcttacattcaagattca
aggtatcattatttcctggagggtttcccagatgcactactatgtggaaatagctctgat
gcgggccaatgtccagaaggatatgtgtgtgtgaaagctggtagaaatccaaattatggc
tacacaagctttgataccttcagttgggcttttttgtccctgtttcgactaatgactcag
gacttctgggaaaatctttatcaactgacattacgtgctgccggaaaaacatacatgata
ttttttgtgctggtcattttcttgggatcattctacctaataaatttgatcctggctgtg
gtggccatggcctatgaggaacagaaccaggccaccttggaagaggcagaacagaaagag
gctgaatttcagcagatgcttgaacagcttaaaaagcaacaggaagcagctcagcaggca
gcaactgtaactgcctcagaacattccagagagcccagtgcagcaggcaggctctcggac
agctcatccgaagcctccaagttgagttccaagagtgctaaggaaagaagaaatcggagg
aagaaaagaaagcagaaggagcagtctggtggggaagaaaaggatgaggatgaattccat
aaatctgaatctgaagacagcatcagaaggaaagggtttcgcttctccattgaagggaac
agactgacatatgaaaagaggtactcttccccacaccagtctttgttgagcatccgtggc
tccctattttctccaaggcgaagtagcagaacaagccttttcagctttagagggcgagca
aaggacgtggggtctgagaacgactttgctgatgatgaacacagcacctttgaggataac
gagagccggagggactctttgtttgtgccccgacgacacggagagcggcgcaacagcaac
ctaagtcagaccagcaggtcgtcccggatgctggcagtgtttccgtcgaatgggaagatg
cacagcactgtggattgcaatggtgtggtttccttggttggtggaccttcagttcctaca
tcgcctgttggacagcttctgccagaggtgataatagataagccagctactgatgacaat
ggaactaccactgaaactgaaatgagaaagagaaggtcaagttctttccatgtttccatg
gactttctagaagatccttcccaaaggcaaagagcaatgagtatagccagcatcctaaca
aatacagtagaagaacttgaagagtccaggcagaaatgcccaccctgttggtataaattt
tccaacatattcttaatctgggactgttctccatattggttaaaagtgaaacatattgtc
aacttggtcgtgatggacccctttgtggacctggccatcaccatctgcattgtcttaaat
actcttttcatggccatggagcactatcccatgacggcacatttcaatcatgtgcttaca
gtaggaaacttggttttcactgggatctttacagcagaaatgtttctgaaaattattgcc
atggatccttactattatttccaagaaggctggaatatctttgatggttttattgtgaca
cttagcctggtagaacttggactcgccaacgtggaaggattatcagttcttcgttcattc
cgattgctccgagttttcaagttggcaaaatcttggccaacattaaatatgctgataaaa
atcatcggcaattcagtgggggctctgggaaatctaaccctggtcttggccatcatcgtc
ttcatttttgctgtggtcggcatgcagctcttcggtaaaagctacaaagactgtgtctgc
aagatctctagtgactgtgaacttccacgctggcacatgaatgacttcttccactctttc
ctgattgtgttccgcgtgctgtgtggagagtggatagagaccatgtgggactgtatggag
gtcgctggtcaagccatgtgccttactgtcttcatgatggtcatggtcattggaaaccta
gtggtcctgaacctctttctggccttgcttctgagctcatttagtgcagacaatcttgca
gccactgatgatgataatgaaatgaacaatctccaaattgctgtggataggatgcacaaa
ggaatagcttatgtgaaaagaaaaatatatgaatttattgtacagtcctttgttaggaaa
caaaagattttagatgaaattaaaccacttgatgatctaaacaacaggaaagaaaattgt
atgtccaatcatacaacagaaattgggaaagatcttgactatcttaaagatgtaaatgga
accaccagtggcataggaaccggcagcagtgttgaaaaatacattatcgatgaaagtgat
tacatgtcattcataaacaatcccagtcttactgtgactgtaccaattgctgtaggagaa
tctgactttgaaaacttaaacacggaggactttagtagcgaatctgatttggaagaaagt
aaagagaaacttaacgaaagcagtagctcatcagaaggtagcacggtggacattggcgca
cctgcagaggaacagcccgttgtggaacctgaagaaacccttgaacctgaagcctgtttc
actgaaggctgtgtacaaagattcaaatgttgtcaaatcagtgtggaagaagggagagga
aaacagtggtggaacctgagaagaacgtgtttccgaatagttgaacataactggtttgag
accttcattgttttcatgattctccttagtagtggtgctctggcatttgaagatatatat
attgatcagcgaaagacaattaagactatgttggaatatgctgacaaggttttcacttat
attttcattctggaaatgcttctaaaatgggtagcatatggctatcaaacatatttcacc
aatgcctggtgttggctggacttcttaattgttgatgtttcattggtcagtttaacagca
aatgccttgggttactcagaacttggtgccatcaaatctctcaggacactaagagctctg
agacctctaagagccttatctcgatttgaggggatgagggtggttgtgaatgccctttta
ggagcaattccatctattatgaatgtgcttctggtttgtcttatattctggctaattttc
agcatcatgggcgtaaatttgtttgctggcaaattctaccactgtattaacaccacaact
ggtgacaggtttgacatcaacgaagtgaataatcatactgattgcctaaaactaatagaa
agaaatgagactgcccgatggaaaaatgtgaaagtaaactttgataatgtaggatttggg
tatctctctttgcttcaagttgccacatttaagggatggatggatataatgtacgcagca
gttgattccagaaatgtggaacttcagcctaagtatgaggaaagtctgtacatgtatctt
tactttgttattttcatcatctttgggtccttcttcaccttgaacctgtttattggtgtc
atcatagataatttcaaccagcaaaaaaagaagtttggaggtcaagacatctttatgaca
gaagaacagaagaaatactataatgcaatgaaaaaattaggatcgaaaaagccacaaaag
cctatacctcgaccaggaaacaaatttcaaggaatggtctttgattttgtaaccagacaa
gtttttgacataagcatcatgattctcatctgtcttaacatggtcacaatgatggtggaa
acagatgaccagagtgaacatgtgactagcattttagcacgcatcaatctggtgttcatt
gtgctgttcaccggagagtgtgtgctgaagctcatctcccttcgccattattattttacc
attggctggaatatttttgattttgtggttgtcattctctccattgtaggtatgtttctt
gccgagctgatagaaaagtattttgtgtccccgaccctgttccgtgtgatccgtcttgcc
aggattggccgcatcctacgtctgatcaaaggagcaaaggggatccgcacgctgctcttc
gctctgatgatgtcccttcctgctttgtttaacatcggcctcctgctcttcctggtcatg
ttcatctatgccatctttgggatgtccaactttgcctatgttaagagggaagttggaatt
gatgacatgttcaactttgagacctttggcaacagcatgatctgcctgttccaaatcacc
acctctgctggctgggatggattgctggcacctattctcaatagtggaccacctgactgt
gacccaaataaagctaaccctggaagctcagtcaagggagactgtgggaacccatctgtt
gggattttcttttttgtcagttacatcatcatatcctttctggttgtggtgaacatgtac
attgcggtcatcctggagaacttcagtgttgctactgaagaaagtgcagagcccctgagt
gaggatgactttgagatgttctatgaggtttgggaaaagtttgatcctgatgcgacccag
ttcatggaatttgaaaaactatctcagtttgcagctgctcttgaacctcctcttaatttg
ccacaaccaaacaaactccagctcattgccatggatttgcctatggtgagtggtgaccga
atccactgtcttgacatcttatttgcttttacgaagcgggttctgggagagagtggagag
atggatgctctccgtatacagatggaagagcgattcatggcttccaacccttccaaggtc
tcctatcagccaatcactacaactttaaaacgaaagcaagaggaagtatctgctgttatt
attcagcgtgcttaccggcgccaccttttaaagcgaactgtaaaacaagcttcatttata
tataataaaaacaaactcaaaggtggggctaatcttcttgtaaaagaagacatgataatt
gacagaataaatgaaaactctattacagaaaaaactgatctgaccatgtccactgcagct
tgtccaccttcctatgatcgggtgacaaagccaattgtggaaaaacatgagcaagaaggc
aaagatgaaaaagccaaagggaaataa
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integrated database retrieval system
