Microcebus murinus (gray mouse lemur): 105868485
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Entry
105868485 CDS
T07238
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56 isoform X1
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
mmur
Microcebus murinus (gray mouse lemur)
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmur04121
]
105868485 (TRIM56)
Enzymes [BR:
mmur01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105868485 (TRIM56)
Ubiquitin system [BR:
mmur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105868485 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
105868485
NCBI-ProteinID:
XP_012614907
Ensembl:
ENSMICG00000037286
LinkDB
All DBs
Position
17:30951510..30961317
Genome browser
AA seq
755 aa
AA seq
DB search
MVSHGSSPSLLEALSSDFLACKICLEQLRTPKTLPCLHTYCQDCLAQLAEGGHVRCPECR
ETVPVPPTGVAAFKTNFFVNGLLDLVKARACGDLRAGKPACALCPLVGGTSAGGPATARC
LDCADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLGPHLDHPCLPLAEAVRARRPGLEELLAGVDSNLVELEAARMVEKEA
LVRLREQAARVGTQVEEAAERVLRALLAQKQEVLGQLRAHVEAAEEAARERLAELEGHEQ
VARAAAAFAHRVLSLGREAEILSLEGAIAQRLRQLQGCPWTPGPAPCLLPQLELHPGLLD
KNCHLLWLSFEAQQSQVDSEKDGAGAQGGDEAQSQTEGAAKAETQNGVRPQGRDGAQTPK
EDRAQTPRDDGTQTPEKDRAQMPHEEGEGQHQKGGMCNKKRRVKGRFKSISREPSPAAGL
NLEGSGLLPRPIFSCSFPTRMPGDKRSPRITGLCPFGPREILVADEQNRALKRFSLNGDY
KGNVPVPEGCSPCSVAALQGAVAFSAGARLYLISPNGKVQWRRALSLSQASHAVAALPSG
DRVAVSVAGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTTSPQGNFVGSDWQQNSVVV
CDGLGQVIGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVILDPKGSLIGDFLTAYH
GLEKPRVTTMVDGRYLVVSLSNGTIHVFRVRSLDS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccatggatcatcaccctccctgctggaggccctgagcagtgacttcctggcc
tgtaaaatctgcctggagcagttgcggacacccaagacactgccctgtctgcacacctac
tgccaggactgcctggcccagctggccgagggcggccatgtccgctgccctgagtgccgt
gagactgtgcccgtgccacccacgggcgtggccgccttcaagaccaacttctttgtcaat
gggctgctggacctggtgaaggcccgggcctgtggagacctgcgtgcagggaagccagcc
tgtgccctgtgtcccctggtggggggcaccagtgccggggggccagccacagcccggtgc
ctggactgcgccgatgacttgtgccaggcctgtgccgacgggcaccgctgcacccgccag
acccacacccaccgggtggtggacctggtgggctacagggcggggtggtacgatgaggag
gcccgggagcgccaggcagcccagtgcccccagcaccccggggaggcgctgcgcttcctg
tgccagccctgctcccagctgctgtgccgagagtgccgcctgggcccccacctggaccac
ccctgcctgcccctggccgaggccgtgcgtgcccggaggcctggcctagaggagctgctg
gcaggtgtggacagcaacctggtggagctggaggcagcccggatggtggagaaggaagca
ctggtccggctgcgggagcaggcagcccgggtggggacacaggtggaggaggccgccgag
cgggtcctccgggccctcctggcccagaagcaggaggtgctggggcagctacgggcccac
gtggaggctgccgaggaggcagctcgggaaaggctggcggagctcgagggccacgaacag
gtggccagggcggcagcggccttcgcccaccgggtgctcagcctgggtcgagaggctgag
atcctctccctggaaggggcgattgcccagaggctgcggcagctgcaggggtgcccctgg
acacctgggccagccccctgcctgctgccccagctggagctccatcccgggctcctggac
aagaactgccacctgctttggctctcctttgaggcgcagcagtcccaggttgacagtgag
aaagatggagctggtgcccaggggggcgatgaggcgcagagccagacagagggtgcggcc
aaggccgagacacagaatggagtgcggccccagggcagggatggagcgcagaccccgaaa
gaggacagggcccagactccccgagatgatggaacccagacccctgaaaaggacagagcc
cagatgccccatgaggaaggagaaggccagcaccagaagggcggcatgtgcaacaagaag
agaagggtcaaaggcaggttcaagtcaatttcccgggagcccagcccagcagccgggctg
aacctggagggctctggcctccttcccaggcccatcttttcctgcagcttccccacgcgg
atgcctggagacaagcggtccccccggatcactggactctgtccctttggcccccgggag
atcctggtggcagatgagcagaaccgggcgctgaaacgcttctccctcaatggcgactac
aagggcaacgtgccagtccctgagggctgctccccctgcagtgtggccgccctgcagggc
gccgtggccttctcagctggcgcaaggctctacctcatcagccctaatggcaaggtgcag
tggcgccgggccctgagcctctcccaggccagccacgccgtggctgcactgccgagtggg
gaccgtgtggccgtcagcgtggcaggccacgtggaggtgtacaacatggagggcagcttg
gccactcggttcatccctgggggcaaggccaaccggggcctgcgggcattggtgttcctg
accaccagcccccagggcaatttcgtggggtcggattggcagcagaatagcgtggtggtc
tgtgacgggctgggccaggtgattggagaatacaggggcccaggcctgcacggctgccag
ccgggctccgtgtccgtggataagaagggctacatctttctgacccttcgggaggtcaac
aaggtggtgatcctggacccgaaggggtcacttattggagacttcctaacagcctaccac
ggcctggaaaagccccgggtgaccaccatggtggacggcaggtacctggttgtgtccctc
agtaacgggaccatccacgtctttcgggtccggtctcttgacagctaa
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