Microcebus murinus (gray mouse lemur): 105868698
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Entry
105868698 CDS
T07238
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X2
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
mmur
Microcebus murinus (gray mouse lemur)
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmur04131
]
105868698 (VPS13A)
Membrane trafficking [BR:
mmur04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105868698 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
105868698
NCBI-ProteinID:
XP_012615225
Ensembl:
ENSMICG00000003937
LinkDB
All DBs
Position
10:complement(20701345..20941379)
Genome browser
AA seq
3084 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVFLKNLQIKENALSQLDVPFKVKVG
HIGNLNLVIPWKNLYTQPVEAILEEIYLLIVPSSRIKYDPLKEEKQLMEAKQHELKRIEE
AKQKVVDQERNRQEKQDTFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQ
NLSMQTTDQYWVPCLHDETAKLVRKLIRLDNLFAYWNVKSQMFYLNDYDESLNHLRNGIV
KEHIVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKIKLDVELHNIAIEFNKPQYFSVME
LLESIDMMTQNLPYRKFKPDVPLHYHAREWWVYAIRGVLEVNVCPALRMWSWKHIREHRQ
KVKKYKELYKKKLTSKKPSGEILMSLEELEKALDVFNITIARQQAEVEVKKAGLRIYKEG
VKYPEDNKGWFGWLWSSWSEKNINEQPDIKPGTLEEMLTPEEKALLYEAIGYSETAVDPT
LPKTFEAMKFFVHLKSMSIVLREDHEKPELLDIVVEEFSILMVQRPGGQAIKFETKIDSF
HVTGLPDNSKKPHLLSSLDDAISLFQITFEINPLDETADQRCIIEAEPLEMIYDARTVNS
IIEFFRPPKEVHLAQLTSVTLTKLEEFRDKTATGLLYIIETQKVLDLKINLKASYIIVPQ
DGIFSPTSNLLILDLGHLKVASKTRSELPDVKQGGANREEIMHRAYDSFDIQLTSIQLLY
SRVGDNWKEARKLNVSTQHILVPMHFNVEFSKAMVFMDLRMPKFKIFGKLPLMSLRISDK
KLQGIMELVESIPKPEPVTEVSAPVKPSQIQTSTTLGTTQISQKIIPFLELPSVSEDESE
EEYFDAPCSPLDESLQIPSRVKGSRHKKLQKQDCSINVTTFKIRFEVPEVLIQFYHLVGD
CELPVVEIDVLGLGTQIEIRTYDLKANAFLKEFCLKCPEYFDENKKPVYLVTTLDNTMED
LLTLEYVKAEKNVPDLKCTYNNVLQLIKVNFSSLDIHLHTEALLNTINYLNNILPQSDEK
STSVSIVETEDKGDVIKKLAFKLSTNEDIITLQILAELSCLQIFIQDQKRKISEIKIEGL
DSEIIMKPAVTEINAKLRNIIVLDSDKTAVYKKAVYITGKEVFSFKMISYVDATAGPAYT
DMNAVDIQINLTVGCIEVVFVTKFLYSVLAFIDNFQAAKQAFAEATVQAAGMAASGVKEL
AQRSSRLALDINIKAPVVVIPQSPISENVFVVDFGLITMTNMFHIVTQSQSNPPPIIDLI
TIKLSEMRLYRSLFINDTYQEVLDLLLPLNLEVIVERNLCWEWYQEIPCFNVNGQLKPME
FILSQEDITTIFKTLYGNIWYEEGGIASPAVIKDQSSVSSGVTNASHHSGGATVVTAAVV
EVHSRASQVKTTLNMSFRTDYLTMVLYSPGPEQASFTDVRDPSLKLAEFKLENIISTAKM
YTDDSTFASFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRRVRDGCVTDAV
FQEMYICASVEFLLTVANVFLEAYTTGTAVETSVQTWASKEEVPIQESDKWEMNIIIKNP
EIVFVADMTRNDAPALVITTQCEICYKGDLQNSTMTAAIKDLQVRACPFLPVKRKGKITT
VLQPCDLFYQATQMGTNPQVIDVSVKSLTLKVSPVIINTIITITSALYTTKETIPKETAS
STAHLWEMKDTKNLKMWFLEESSETENMAPATELVPKGEMIKMNIDSIFIVLEAGIGHRT
VPMLLAKSCFSGEGKNWSSLIHLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWN
LGIKMKKKAKKAIVESDTEEENYKVPEYKTVITFYSKDQLNITLSKCGLVMLNNLAKAFT
EAATGSSPVFIRDLAPFMILNSLGLTISISPSDSFSVLNVPMAKSYVLKSDESLNMDYVR
TKDNDHFSAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQI
DTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPENEFNIPLPSYRSFLFLKPED
KDYQMSEGIDFEEIIKNDGALLKKKCRSINPSKKSFLINIVPEKDNLTSLSVYSEDGWDL
PYIIHLWPPILLRNLLPYKIAYYTEGIDNSVFTLNEGHSAQICTIQLDKARLHLKLLDYL
NHDWKSEYDIKPNQEDISFINFTCVTEIEKTDLDIAIHVTYNTGQIVVAFHSPYWMVNKT
GRMLQYKADGIHRKHPPDYKKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHG
AVKCKGLKMEYQVGVTIDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGSDTWLSLDLE
QCIPFWPEDASSKLLIQVERSEDPPKRIYFNKQENCILLRLDNKLGGIIAEVNLAEHSTV
ITFSDYHDGAATFLLINHTKNDLVQYKQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWK
CGKSQGEVTQKDDMMTPIDLGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAE
QEIALALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKSRWKPMSLKHTEKLEKEF
KEYIESSPAEDKVIELDTNIPVRLTPNGNNMKILQPNITAIRRNYLPALKVEYSTSAHQS
SFRIQIYRIQIQNQIHGAVFPFVFYPIKPPKTVSMDSAPKPFTDVSIVMRSAGHSQISRI
KYFKVLIQEMDLRLDLGFAYALADLMTEAEVTEKTEVELFHKDIEVFNEEYKTVSLVDQS
QVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQDEGLIPVHSLNLLLKSIGATLTDVQDV
VFKLAFFELNYQFHTTTELQSEVVRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVE
AFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAITMDEDY
QQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKG
LVGAVARPTGGIIDMASSTFQGIKRATETYEVESLRPPRFFNEDGVIRPYRLRDGTGNQM
LQKIQVYRERNMTHSSSSDEDDDD
NT seq
9255 nt
NT seq
+upstream
nt +downstream
nt
atggtattcgagtcggtggtcgtggacgtgttgaaccggttcttgggagactatgtggtg
gacctggacacgtcccagctctctctgggcatctggaaaggagctgtattcctcaagaat
cttcaaattaaagaaaatgccctgagtcaactggatgtaccatttaaagttaaagttggc
catataggtaatcttaaccttgtaattccatggaagaacctttatactcaaccagttgaa
gctatattggaagaaatttatttactcatagtgccttcttctagaataaaatatgatcct
ttaaaagaagaaaaacaactcatggaagcaaagcaacacgaactaaaaagaatagaagaa
gcaaaacaaaaagtagttgatcaagaacgaaatcggcaagagaaacaggacacttttgca
gaaaaattagttactcagatcataaaaaatcttcaagtgaaaatttccagcattcatatt
cgttatgaagatgatatcactaatcgagacaaaccgctgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaatactgggttccatgtttacatgatgaaactgcg
aaactagttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagatgttttatcttaatgattatgatgaatcattgaatcacttgaggaatggcattgtc
aaagaacatattgttccagaaggttatgattttgtatttcgccccatatctgctaatgcc
aaactgcagatgaatcgtcgatcagattttgatttttctgcccccaaaataaaactggat
gttgagttacataacatagcaattgaatttaataaaccacagtattttagtgttatggag
cttcttgaatcaattgatatgatgacacaaaatctaccctacaggaaattcaaacctgat
gtacctcttcactaccatgccagggaatggtgggtttatgctatacgtggtgttcttgaa
gtaaatgtttgccctgccttacggatgtggtcatggaagcatattcgtgaacataggcaa
aaagtgaagaaatataaagaactgtataaaaaaaaattaacaagtaagaagccatctggt
gaaattctcatgtctttggaggagttggaaaaagcactggatgtctttaacataactata
gctagacagcaggcagaagttgaggtgaagaaagctggactcaggatttataaagaaggg
gtaaaatatccagaggataataaaggatggtttggttggctgtggtcttcttggtcagaa
aaaaatattaatgaacaaccagatattaaacctggaactcttgaagaaatgttgacacct
gaagaaaaagctttactctatgaagcaattggttatagtgaaacagcagttgatccaacc
ttgccaaaaacatttgaagccatgaagttttttgttcacttgaaaagtatgtctattgtt
ctaagagaagatcatgaaaaacctgagctgttagatattgtagtagaagaatttagcatt
ttgatggtacaaagaccaggaggacaagcaataaaatttgaaaccaaaatagattcattt
catgttactggcttaccggataattcaaaaaaaccccatctcctttcttcgttggatgat
gctatttcactcttccaaattacatttgagataaatccattagatgaaactgctgatcaa
aggtgtatcatagaagctgaacctttagaaatgatatatgatgcaaggacagtgaatagt
ataatagaattcttcagacctccaaaagaggtacatctagcacaactcacttcagtgact
ttgacaaaacttgaggagtttcgtgataagacagcaacaggtctactatatattattgaa
acacagaaagttcttgatctcaaaattaatttgaaggcttcatatattattgtccctcaa
gatggaatttttagtcctacatcaaatctacttattttggatcttggtcatctaaaggtg
gcaagtaaaactcgttcagaattaccggatgtgaaacaaggtggagctaatcgtgaagaa
ataatgcatagagcttatgattcctttgatattcagcttacaagtatacagctgctttac
agcagagttggtgataattggaaagaagcacgaaaactcaatgtatctacacaacatatt
ttggtacccatgcacttcaatgtggaattctctaaggctatggttttcatggacttaagg
atgcccaaattcaagatttttggaaagttacctcttatgtctttacggatctcagataaa
aaactacaaggcattatggaattggttgaaagcatcccaaaacctgaacccgtaactgaa
gtatctgcccctgtcaaaccatcgcagattcaaacatctactactttgggaactacacag
atttcacagaagataattcctttcttggagcttccttctgtttctgaagatgagtcagag
gaggaatattttgatgcaccttgtagtcccttggatgagtctcttcaaattccatctaga
gttaaaggtagtcgacacaaaaagttacaaaaacaggattgttcaataaacgtgactaca
tttaaaatacgatttgaagtaccagaggttttgattcagttttatcaccttgttggagac
tgtgaactgcctgtggtagaaattgatgttttaggattgggtacacaaatcgagattaga
acatatgatttgaaagcaaatgcctttttgaaagagttctgcttaaaatgcccagaatac
tttgatgaaaacaagaaaccagtttatttggtcacaacactggataacacaatggaagat
ctgttaacactggaatatgtgaaggctgaaaagaatgtacccgacttgaaatgtacctat
aacaatgttttacaactgattaaggtgaatttttcctctttggatattcatttacacacc
gaagcacttctgaatacaataaattaccttaataatatccttccacaatcagacgaaaaa
tcaacctcagtgagtattgtagagactgaagacaaaggagatgtcattaaaaaactagct
tttaaattatccacaaatgaagatattattaccttgcagattttagcagaattatcatgt
ttacagatctttattcaagatcagaaacgtaaaatttctgaaattaagattgaaggactt
gattctgaaataattatgaaacctgcagtaactgaaataaatgcaaagctaaggaatata
attgttttggattctgataaaacagctgtatacaaaaaggctgtttatatcactggaaaa
gaagttttcagctttaaaatgatttcttacgtggatgcaactgctggtcctgcatacaca
gatatgaatgcagttgacattcagattaatttaacagttggttgcattgaagtagttttt
gtcacaaaatttctgtattctgtattggcttttatagataattttcaagcagctaagcaa
gcctttgctgaggcaactgttcaggcagcaggaatggctgctagtggtgtaaaagaactg
gcacaaaggagttccagactggccttggatattaatatcaaagccccagtggtggtcatc
ccacagtctccaatttctgaaaatgtttttgttgttgattttggactaattacaatgaca
aatatgttccatatagtaacacagagccaaagcaatcccccacctattattgatttgata
acaataaagctgagtgaaatgcgactgtacagatctctatttattaatgatacttaccag
gaagtactggatctattgctgccattaaatcttgaagtcattgttgagcgaaatttatgc
tgggagtggtatcaggaaattccttgttttaatgtaaatggtcagctaaaacccatggag
ttcattctcagtcaagaagatataacaactatttttaaaacattatatggcaatatatgg
tatgaagaaggtggtattgcctcacctgctgtcataaaagaccaaagtagtgtctctagt
ggagttactaatgcttcacaccattcaggaggagccactgtggtgacagctgctgtggta
gaagtacattcacgtgcctcacaagttaaaacaacactaaatatgagtttcagaactgat
tatctcaccatggtactgtatagtccaggccctgaacaggcttcatttacagatgttcgt
gatccttctctgaaacttgctgaatttaaattggaaaatattataagtactgcaaaaatg
tatacagatgactcaacatttgcttccttctcattaaaaaactgtattttagatgataaa
agacctcatgtcaagaaagcaactcctagaatgataggattgacagttgggtttgataaa
aaagacatgatggatgtaaagtacaggagagtcagagatggttgtgtgactgatgcagtc
tttcaggaaatgtatatttgtgcaagtgtggaatttctgctgaccgttgcaaatgtcttt
ttggaggcctacaccacaggcactgctgtagaaaccagtgttcaaacatgggcttctaag
gaagaagtacctatacaggaatcggataaatgggaaatgaatattattattaaaaatcct
gaaattgtgtttgtggctgacatgacaagaaacgatgctcctgccttagtcattacaaca
caatgtgaaatttgctataaaggtgaccttcaaaacagtacaatgactgctgccattaaa
gatctccaagtgagagcatgcccatttcttccagtcaagagaaaaggcaaaatcactact
gttttgcagccctgtgacttgttttatcaggctactcagatgggtacaaatccacaagtg
attgatgtttcagtaaaatccctgacactaaaggtttcaccggttattatcaataccata
attaccataacttcagcactttatacaactaaggaaaccattccaaaagaaactgcttct
tccacagcacatttatgggaaatgaaggacacaaagaatctaaaaatgtggttccttgaa
gaatcaagtgaaactgaaaacatggctcctgcaactgaattggtacccaaaggagagatg
ataaaaatgaacattgattctatttttatagttcttgaggctggaattggtcatagaaca
gtgcctatgcttttggcaaagtcatgtttttcaggggaaggcaaaaactggagttcctta
atacatctccactgtcagcttgagctagaagtgcattattataatgaaatgtttggtgta
tgggaacctttgcttgaacccctagaaattgatcagactgaggattttagaccatggaat
cttggaatcaagatgaaaaagaaagcaaaaaaggccattgttgagtcagatactgaagaa
gaaaactacaaagtgccagaatataaaactgtcatcactttctattcaaaagaccaatta
aacattacattatctaaatgtggtcttgtaatgttaaataatttagccaaggcatttaca
gaagctgccactggatcttcacctgtcttcataagggatctagcaccatttatgatttta
aattctcttggacttactatttccatttcaccaagtgattcttttagtgtactcaacgtt
cctatggcaaaatcatatgtattgaaaagtgatgagagtttaaatatggattatgttcga
actaaagacaatgatcacttcagtgcaatgactagcctaagcagcaaactcttcttcatt
cttctcacacctgttaatcactctactgctgataagattcctttaacaaaagtgggacga
cgtctgtacactgtaaggcacagagaatctggagttgaaagatctattgtttgtcaaatt
gatacagtggaaggaagtaagaaggtaacaattcgctccccagtacagattagaaatcac
ttttcagtcccactctctgtttatgaaggggataccttattgggaactgcttcacctgaa
aatgaattcaacataccattgccatcttaccgatcattcctttttctgaaaccagaagat
aaggactatcaaatgagtgaaggaattgactttgaagaaattataaaaaatgatggagct
cttctaaagaagaaatgtcgatctataaacccttctaagaaatcatttctcattaatatt
gtcccagaaaaagataatttaacatctctatcagtgtattcagaagatggctgggactta
ccatacataatacatttatggccacctatcctactccgaaatcttcttccttacaaaatt
gcttattatacagagggaattgacaattcagtttttactctaaatgaaggacattcagcc
cagatttgtactatacaattggataaagccaggctacatttaaaattacttgactatctt
aaccacgattggaaaagtgaatatgatataaaacctaatcaagaagacattagtttcatc
aattttacctgtgttacagaaatagaaaagactgatttagatattgctatccatgtgact
tacaatactggtcagatagttgtggcatttcatagtccttattggatggtgaataaaact
ggtcgaatgttacaatacaaagcagatggaattcatcgaaagcatccacctgattataaa
aaaccagttctattttcttttcagccaaatcacttttttaataacaataaggtacagctt
atggtaactgatagtgagttgtcagatcagttttcaattgatactgttggtagtcatgga
gctgttaaatgtaaaggcctgaaaatggaatatcaagttggtgtcactatagacctcagc
agttttaacattaccagaattgtgacatttactcctttttatatgattaaaaacaaaagc
aagtatcatatatcagtagctgaagaaggaagtgatacatggctctctctggatttggag
cagtgtatccccttttggcctgaggatgcttctagtaaacttcttattcaagttgaaagg
agtgaggatcctcccaaaaggatatattttaacaagcaagaaaattgtattttattgcgt
ctggataataagcttggaggtattatagcagaagttaatttggctgagcattctacagtt
attacattttcagattatcatgatggagcagctacattcttgttaataaatcacacaaag
aatgatcttgttcagtacaagcaaagttctctcagtgaaatagaagattccctccctcct
ggaaaagcagtattttatacatgggctgatccagtgggctctagaaggctaaagtggaaa
tgtggaaaaagccaaggtgaagtaacacaaaaggatgatatgatgacacctatagatttg
gggaaaaagacaatttatttagtctcattctttgaaggcttacagcgcattattttattc
actgaagatccaagggtatttaaagtaacatatgaaagtgagaaagcagagttagcagag
caagaaattgcattggcgttacaagacgttggaatttctcttgtcaacaattacacaaag
caagaagtagcctatataggcattacaagttctgatgtggtttgggagacaaagcccaag
aagaagtcaagatggaagccaatgagtttaaagcacactgagaagttagagaaagaattt
aaggaatatattgaatcttcacctgcagaagataaggttattgagttggacactaacatt
ccggttcgcttaacacctaatggtaataacatgaaaattctgcaaccaaatataacagct
atacgaagaaattatcttccagcattaaaggtggaatatagcacatctgcacatcaatca
tcatttagaattcaaatttacagaatacagatccaaaatcagatacatggtgctgtattt
ccatttgtgttttatcctattaaacctccaaagacggtctccatggattcagcaccaaag
ccctttacagatgtcagtattgtcatgagatctgcaggacattcccagatatcacgtatt
aagtatttcaaagtgttgattcaagaaatggatttaaggttagatcttgggtttgcctat
gctttagcagaccttatgacagaagctgaggtgactgaaaaaacagaggttgaacttttt
cataaagatatagaagttttcaacgaagaatataaaacagtttcattagtagatcaatca
caagtcagtctctatgaatattttcatatatctcctatcaagttgcatttaagtgtttca
ctgagttcgggcagagaagaagctaaagattcaaaacaggatgaaggactgattccagtt
cattctttaaatcttttgctgaagagtattggtgccactcttacagatgtacaagatgta
gtttttaagcttgcattttttgaactcaactatcagttccatacgacaaccgaactacag
tctgaagtagtaagacactattcaaaacaggccattaaacagatgtatgtactcattctt
ggactcgatgttttgggaaatccctttggcttaattagagaattttctgaaggtgtagaa
gcatttttttatgaaccctaccagggagccatccagggtcctgaagagtttgtggaggga
atggcactgggacttaaggcactagttggtggagctgttggtggattagctggtgctgcc
tccaaaatcactggtgctatggctaaaggggtagcagctataactatggatgaagactac
caacagaagagaagagaagccatgaataagcaaccagctggttttagagaaggcatcact
cgtggaggaaaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaaa
ccaatcaaaggggctcaaaaagaaggagcagctggtttctttaaaggtgttgggaaaggt
ttagttggagcagtagcaaggccaaccggaggcatcatagacatggctagtagtacattt
caaggaataaaaagagctacagagacttatgaagtagagagtttgcgacctcctcggttc
tttaatgaagatggggttatcagaccttacaggttgagggatggtactggaaatcaaatg
ttacagaaaattcaggtctacagggagaggaatatgactcacagtagcagtagtgatgag
gatgatgatgattag
DBGET
integrated database retrieval system
