Microcebus murinus (gray mouse lemur): 105868724
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Entry
105868724 CDS
T07238
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105868724 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmur03019
]
105868724 (PATL1)
Messenger RNA biogenesis [BR:
mmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105868724 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
105868724 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
DUF8825
Motif
Other DBs
NCBI-GeneID:
105868724
NCBI-ProteinID:
XP_012615271
Ensembl:
ENSMICG00000004172
LinkDB
All DBs
Position
5:complement(3290677..3320673)
Genome browser
AA seq
767 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEHTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQICSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPSATPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEMQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDGPFVSDHVYPKREENGLPV
FSFLSTEQAADIPSRTTAQTTSLLLIKKVLPCLLSPFSLLLYHLPSMTVTSLLQQLMNLP
QSAAAPAPSNPHLTAVLQNKFGLSLLLILLSRGEDLQSSDSATESTQNNQWTEVMFMATR
ELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgccctctggatgaagacgaagatgcatttcag
ggcctgggagaggaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaagaagcacatgagcgcctggctgaattggaagagaagcta
ccagtggcagttaatgaacacacaggcaatggagagagggatgagatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaattagaa
gatccagctatcatgagggcagtgcagaccaggccagttttgcaaccccaaccaggaagt
ctgaattccagcatctgggatggatctgaggttctgaggagaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcctccacag
ggcccagaagatgatcgggacctttctgaacgtgcgttaccaaggcggtcaacttcacct
atcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtacccagcttcaaccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccaccgcgttatcctgctccctatggtgagaggatgtctccaaaccagatctgcagtgtc
ccgaattcttccctcctgggtcacccttttcctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
caatttgcacgggtccctggatttgttggtagtccacttgctgccatgaatcctaagttg
ctacaagggcgagtcgggcagatgctccccccagcaccaggcttccgtgccttctttagt
gctccaccctccgctacaccacctccgcaacagcaccctcctggcccaggacctcacctg
caaaatctaagatctcaggccccaatgtttagaccagacacaactcaccttcatccacag
caccgtcgactcttgcatcagagacagcaacagaatagaaatcagcatcggaatctcaat
ggtgcaggggatagaggaagtcaccgaagcagtcatcaggatcatctccgaaaggatccg
tatgccaatctcatgttgcagcgggaaaaggattgggtctctaaaatccagatgatgcaa
ctgcaaagcactgatccctacctggatgatttttattaccagaattactttgaaaaactg
gagaaattgtcagctgctgaagaaatgcaaggtgatggccctaaaaaggagcgcactaag
ctcattacccctcaggtggctaaactggagcatgcctataagccagtgcagtttgagggt
tctttgggaaagcttactgtctctagtgtgaataatccgcgaaaaatgattgacgccgtt
gtgacatctcgcagtgaggatgatgagacaaaagaaaaacaggttcgagacaagagaaga
aaaacccttgtcataattgagaaaacctatagtttactccttgatgtagaagattatgag
aggcgttatctcctaagtcttgaagaagagcgacctgccttgatggatgaaagaaagcac
aaaatttgtagcatgtatgacaacttaaggggtaaattgcctggacaggagaggccaagt
gatggaccatttgtatcagatcatgtgtatccgaaaagggaagagaatggtttgcccgta
ttttcctttctctccacagagcaagcagctgacattccatcacgaacaacagctcagacg
acctcccttctccttatcaagaaggtgctgccatgcttattgagtcccttctctctcctc
ctctatcatcttccatcaatgactgtcaccagccttctgcaacagctaatgaacctacct
caaagtgcagctgcaccagcaccctccaatcctcacctcactgctgtgctccaaaacaag
tttggcctgtcactgctcctcatccttctgagccgtggggaagacctacagagttcagac
tctgccacggaatcaacacaaaataatcagtggacagaggtgatgttcatggcaacccga
gaacttctacggattccccaagcagccctggccaagccaatctctatacccacaaaccta
gtatccctcttttctcgctatgttgaccggcagaaactgaacttgctggagacaaagctg
cagctagttcaggggatacgataa
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