Microcebus murinus (gray mouse lemur): 105868746
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Entry
105868746 CDS
T07238
Symbol
SCAF8
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
mmur
Microcebus murinus (gray mouse lemur)
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmur03021
]
105868746 (SCAF8)
03041 Spliceosome [BR:
mmur03041
]
105868746 (SCAF8)
Transcription machinery [BR:
mmur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105868746 (SCAF8)
Spliceosome [BR:
mmur03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105868746 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105868746
NCBI-ProteinID:
XP_012615300
Ensembl:
ENSMICG00000028965
UniProt:
A0A8C5YD20
LinkDB
All DBs
Position
6:110245577..110463703
Genome browser
AA seq
1292 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLAGTTAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEP
KKEIPTSQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQPQKATPQDSQEGTFGS
EHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEAQDAVEEEIFEQETKKVAVRSRS
RTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQ
KKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMV
HRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKMDD
LEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAM
LQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPP
VVPPPAIPPVVPTSLVQPPLSMTPETVKDVGFGSIVIPGGAVASSLATSALPAGNVFNPP
TKQAEPEEKVPHLIDHQISSGENTRSVIPNDIPSNAAILGGQPPNVTSNSGILGVQRPNV
SSNSEILGVRPSNVSSGSGIMGAHPPNILNNSGILAIQPPSVSSSSGLLAVLPPNIPNNS
GLIGVQPPNVPNTSGLLGTQPPAGHQNLPPLNIPSQRMPAIPMLDIRPGLIPQAPGPRFP
LIQPGIPPQRGIPPPSVLDAALHPPPRGPFPPGDIFSHPERPFLAPGRQSIDNVTNPEKR
IPLGNDNIQQEGDRDYRFPPIESRESISRPPPVDVRDMVGRPVDPREGPGRPPLDGRDHF
IRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEER
GRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREVNGNRLGR
DRIQNAWVPPPHVPRVFDYFEGATSQRKGDNVPQVNGENTERHAQPPPLPVQSDPELFEK
LTSSSEINKEKSDTVADIESEPVVESTETEGT
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaaaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactataaacca
cccatttctaaagcgaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagtgtagagaagtttattcagaaatgtaaaccagaatacaag
gtacctggactttatgttattgactctattgtgcgacaatcccgacatcagtttggtcaa
gaaaaggatgtgtttgcgcccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggacgacaagagtaaaatagtgagagtattaaacttgtggcagaag
aataatgtatttaagagcgagattattcagcctcttttggatatggcagcagggatacct
cctccagttgtcacacctgttttggctggtactactgctgctatgagcaatactccagga
actccggtgacacctgttactccagccaatgtggtccaaggcttacctgatccatgggta
tctcagataacaaatacagatacacttgcagcagtggctcagatcttacaaagtcctcaa
ggccaacagctccagcagttaatacaaactttacagctacaacagcagaagccccagcct
tccattctacaggccctggatgccggtcttgtcgtccaattgcaagctcttacagcacaa
cttacagctgcagctgcagcagccaacactcttactcccttagaacagggagtctctttt
aacaagaagttgatggataggtttgattttggggaagattctgagcatagcgaagaacca
aaaaaggaaattccaacttctcaactttctcatgtttcagaatctgtgaacaattccatt
tttcatcagatagcagaacaactacaacagcaaaaccttgaacatctcagacagcagctc
ctggaacaacagcctcaaaaggccactcctcaggatagtcaagaaggaacatttgggtca
gagcattcagcttcaccatcacaagggagcagtcaacagcattttcttgaacctgaggtc
aatttggatgattccatagatattcagcaacaggatatggatatagatgaagcgcaagat
gcagtggaagaggagatttttgaacaagaaactaagaaagtggcggttcgctcaagatca
agaacacattcacgatctcgttcaagatcaccaaggaaacgaaggtctagatcacggtca
ggttctcgaaagcgtaaacatagaaagcgatcacgctcccgctcaagagaaagaaagagg
aaatcatcacgttcatactcaagtgaaaggagagccagagaaagggagaaagaacgacag
aaaaaaggattacctccaattagatctaaaacattaagtgtatgtagtactactctctgg
gttggtcaggtggacaagaaggcaacacagcaagatttaaccaatctatttgaagagttt
gggcaaattgaatccatcaatatgattccgcccaggggctgtgcttatgtttgtatggtt
catcgacaagatgcatttcgagctcttcagaaacttagttctggatcatataaaattggg
tccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatacaaacaa
ttctgggacgtggatcttggggttacatatataccgtgggaaaaagttaaaatggatgac
ttggaaggttttgcagaaggaggcatgattgatcaggagactgtaaatactgaatgggaa
actgtgaaaagttcagaacctgttaaagagacggtccagacaactcagagtccaactcca
gttgaaaaggagacagtggtcacaacccaggcagaggttttccctccacctgttgctatg
ttgcagattccagtggctccagctgtgcctacagttagtttagtcccacccgcatttccc
gtgtcgatgccggttcctcctcctggattcagtccaatccctccacctccttttctacga
gcaagttttaacccttcacagccaccacctggtttcatgccacctccagttcccccacct
gttgtaccaccccctgcgattccaccagtagtaccaacgtctttagtgcagccgccatta
tccatgaccccagaaactgtgaaagatgttggatttggtagcattgttataccaggtggt
gctgttgccagcagtcttgctacttccgctctgccagctggaaatgtttttaatcctcca
actaaacaagcagagcctgaagaaaaagtacctcatcttatagaccaccagatttcttct
ggtgaaaacaccagatcagtgattccaaatgatattccaagtaacgctgcaattttagga
ggccagccaccaaatgtgacaagcaattctggaattctgggagtccaaagaccaaatgta
tcgagtaattctgaaattcttggtgtccggccatctaatgtttccagtggttctgggatt
atgggagcccacccaccaaatattctgaataactctggaattttggcaatacagccacca
agtgtgtcgagtagttctggacttttggcagtgctacccccaaatatacctaacaattct
ggacttataggagtacagccaccaaatgttccaaatacttctggacttctgggaacacag
ccaccagctggacatcaaaatttaccccctttaaatatccctagtcaaaggatgcctgca
ataccaatgttagacattcgtccaggactaataccacaggcacctggaccaagattccct
ttaatacagcctggtataccaccccaacgcggaatccctcccccatcagtacttgatgca
gctcttcatccaccaccccgtggaccttttcctccaggagatatttttagtcatcctgaa
agaccttttctagctcctggaagacaaagtatagacaatgttactaacccagaaaaaagg
ataccacttgggaatgataacattcaacaggaaggagatagagattaccgttttcctcct
atagaaagcagagaaagcattagtagacctccccctgtggatgttagggatatggttggg
cgtcctgttgatccaagagaaggtcctggaaggcctccattagatggtagggatcatttt
ataagaccacctgtagatataagagagaatcttgtgaggccgggtatagatcatcttggt
cgaagagaccactttggctttaatccagagaagccctgggggcatagaggagattttgat
gaaagagagcatcgggttctacctgtctatggtggtccaaaaggcttacatgaagaaaga
ggtagatttcggtctggaaactatcgttttgatcctagaagtggtccttggaacagagga
tttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaaagg
gatagggatgacagagattttgatttctgcagagaagtgaatggaaatcgtcttggacga
gatagaattcaaaacgcttgggttccccctcctcatgttcctcgggtttttgattatttc
gaaggggccacttctcaacgaaaaggtgataatgtgcctcaggttaatggtgaaaataca
gagagacatgctcagccaccacctttaccagtacagagtgatcctgaactttttgaaaaa
ctgacatcttcaagtgagataaacaaggagaagagtgacacagttgctgatatagaaagt
gaaccagtggtagaaagcacagaaactgaggggacataa
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