Microcebus murinus (gray mouse lemur): 105869349
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Entry
105869349 CDS
T07238
Symbol
LIG1
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03030
DNA replication
mmur03410
Base excision repair
mmur03420
Nucleotide excision repair
mmur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105869349 (LIG1)
03410 Base excision repair
105869349 (LIG1)
03420 Nucleotide excision repair
105869349 (LIG1)
03430 Mismatch repair
105869349 (LIG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmur03032
]
105869349 (LIG1)
03400 DNA repair and recombination proteins [BR:
mmur03400
]
105869349 (LIG1)
Enzymes [BR:
mmur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105869349 (LIG1)
6.5.1.6 DNA ligase (ATP or NAD+)
105869349 (LIG1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
105869349 (LIG1)
DNA replication proteins [BR:
mmur03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
105869349 (LIG1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
105869349 (LIG1)
DNA repair and recombination proteins [BR:
mmur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
105869349 (LIG1)
NER (nucleotide excision repair)
Other NER factors
105869349 (LIG1)
MMR (mismatch excision repair)
Other MMR factors
105869349 (LIG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Presenilin
DDR
PucR
Motif
Other DBs
NCBI-GeneID:
105869349
NCBI-ProteinID:
XP_012616513
Ensembl:
ENSMICG00000007160
UniProt:
A0A8C6EK52
LinkDB
All DBs
Position
22:complement(17881160..17920933)
Genome browser
AA seq
916 aa
AA seq
DB search
MQRSIMSFFHPKKEGKAKKPEKEASNSSRETEPPPKTALKEWNGVVPDNDSPVKRPGRKA
ARVLGSEGEEDDEALTPPKGKKPGPECLKVSPPSPATSPENRSSLSDTSPMGISPLGILK
RRTARKQLPKRTIQDVLEEQSKDKDREAKRRKEEEEAETQKESLTKAEVATKKEEEEEGD
QPMTPPNSVETSKAEKPKGSSSEPKVAVKQEAQEDETKPPPRAPKTLSSFFTPRKPAVKK
EVKEEGPGAPGKDSKGPLDPTSYNPAKNNYHPIEDACWKPGQKVPYLAVARTFEKIEEVS
ARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNSLGPPQQGLELGVGDGVLLKAVAQATG
RQLESVRAEVAEKGDVGLVAENSRSTQRLVLPPPPLTASGVFAKFLDIARLTGSASTAKK
MDIIKSLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALAQAVSLTPPGQGFPPAVVDA
GKGKTAEARKTWLEEQGMTLKQTFCEVPDLDRIVPVLLEHGLERLPEHCRLSPGIPLKPM
LAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIIS
RIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLI
YLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIDQIAEFLEQSVKDSCEGLM
VKTLDVDATYEIAKRSHNWLKLKKDYLDGLGDTLDLVVIGAYLGRGKRAGRYGGFLLASY
DKDSEELQAICKLGTGFSDEELEEHHQQLQALVLPAPRSYVRIDGAAAPDHWLDPSTVWE
VKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKQPEEATSSAQVAYLYRKQSQI
QNQQGEDSDSNPEDTD
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagtatcatgtcatttttccaccccaagaaagagggtaaagcgaagaagcct
gagaaggaggcatccaacagcagcagagagacggagccccctccaaagacggcgctgaag
gagtggaatggagtggtgcccgataacgactccccagtgaagaggccggggaggaaggcg
gcccgggtcttgggcagcgaaggggaggaggatgacgaagccctgactccccccaaagga
aagaaacctggcccagagtgcctaaaagtctcccctcctagtcctgccacatctcctgag
aacaggtcttccctctctgacacctctcccatgggcatctccccactggggatcctgaag
cgccgcacagctcggaagcagctccccaaacggacaattcaggacgtcctagaggagcag
agtaaggacaaggaccgagaagccaagaggaggaaggaggaagaagaagcagagacccag
aaagaaagcctaacaaaggctgaagtggcaacaaagaaagaagaagaagaagagggggac
cagcccatgacacctcccaattctgtagagacctccaaagcagagaagccgaagggaagc
agttcagagcccaaggtggccgtgaagcaggaagcacaggaggacgaaactaagcctccc
cccagagcccccaagacgctcagcagcttcttcacaccccggaagccagcagtcaaaaaa
gaagtgaaagaagaggggccgggcgctccagggaaggacagcaagggacccctggaccca
accagctacaatcctgccaagaacaactaccatcccattgaagatgcctgctggaaacca
ggccagaaggtcccttatctggccgtggcccggacatttgagaaaatcgaggaggtttct
gcccggctccggatggtggagacactgagcaacttgctgcgctccgtggtggccctgtca
cccccagacctcctccctgtcctctacctcagcctcaacagccttgggccaccccagcag
ggcctggagcttggtgttggggacggcgtccttctcaaggcagtggcccaggccacaggt
cggcagctggagtccgtccgggctgaggtggctgagaagggcgacgtggggctggtggcc
gagaacagtcgcagcacccagaggctcgtgttgccgccgcccccgctcactgcctcgggg
gtcttcgccaagttcctcgacatcgccaggctcactggcagtgcttccacagccaagaag
atggacatcatcaaaagcctctttgttgcctgtcgccactcagaagcccgattcatcgcc
aggtccctgagcggacggctgcgcctggggctggcagagcagtccgtgctggccgccctc
gcccaggccgtgagcctcacgcccccaggccaaggcttcccccctgctgtggtggatgct
gggaagggcaagacggcagaggccaggaagacatggctggaggagcagggcatgaccctg
aagcagacgttctgtgaggtgcctgacctggaccgaattgtccccgtgctgctggagcat
ggcctggagcgtctcccggagcactgcaggctgagcccaggcatccccctgaagccaatg
ctggcccatcccactcggggtgtcagcgaggtcctgaaacgcttcgaggaggcagctttc
acctgcgagtacaaatacgatgggcagagggcacagatccatgttctggaaggcggggag
gtgaagatcttcagcaggaaccaggaagataacaccgggaagtacccggacatcatcagc
cgcatccccaagattaaactcccgtctgtcacatccttcatcctggacacggaagccgtg
gcttgggaccgggaaaagaagcagattcagccattccaagtgctcaccactcgcaaacgc
aaggaggtggatgcgtctgagatccaggtgcaggtgtgtctgtacgccttcgacctcatc
tacctcaacggagagtccctggtccgtgagcccctttcccgacgccggcagctgctccgg
gagaacttcgtggagacggagggtgagtttgtcttcgccacctccctggacaccaaggac
atcgaccagatcgccgagtttctggaacagtccgtgaaagactcctgcgaggggctgatg
gtgaagaccctggatgtcgacgccacctacgagatcgccaagagatcgcacaactggctc
aagctgaagaaggactacctcgacggcttgggcgacaccctggaccttgtggtgatcggc
gcctacctgggccgggggaagcgggccggccgctacgggggcttcctgctggcctcgtac
gacaaggacagtgaggagctgcaggccatatgcaagctcggaaccggcttcagcgacgag
gagctggaggagcatcaccagcagctccaggccctggtgctgcccgcgccacgctcctac
gtgcgcatagatggcgccgcggcccccgaccactggctggaccccagcaccgtgtgggag
gtgaagtgcgcagacctctccctctcccccatctaccccgcagcccggggcctggtggac
agtgagaaagggatctccctccgcttccctcggtttattcgagtccgggaagacaagcag
cccgaggaggccaccagcagtgcccaggtggcctacctgtaccggaagcagagtcagatt
cagaaccagcagggtgaggactcggactctaaccctgaagatacggactag
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