Microcebus murinus (gray mouse lemur): 105869553
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Entry
105869553 CDS
T07238
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03015
mRNA surveillance pathway
mmur04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105869553 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105869553 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmur03021
]
105869553 (SYMPK)
03019 Messenger RNA biogenesis [BR:
mmur03019
]
105869553 (SYMPK)
Transcription machinery [BR:
mmur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105869553 (SYMPK)
Messenger RNA biogenesis [BR:
mmur03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105869553 (SYMPK)
U7-dependent histone pre-mRNA processing factors
105869553 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
105869553
NCBI-ProteinID:
XP_012616920
Ensembl:
ENSMICG00000001871
UniProt:
A0A8C5WA43
LinkDB
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Position
22:complement(16173013..16208863)
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AA seq
1275 aa
AA seq
DB search
MASNSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLRQVQE
LIINKDPTLLDNFLDEIIAFQVDKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGALANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLNVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLPAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLVFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASSKQEPEAKEAPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGAVGAPSTSSVSPSSSSARPGPPASEEAMDFREEGPECE
TPAIFISMDDDSGLTEAALLDSSLDGPLPKEAAAGGLTSKEERSPQTLAPAGEDAVKTPS
PAAEEAGDAETKGNS
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaacagtggggacagcgtcacccgccggagtgtggcatcacagttttttact
caagaagaggggccaggcattgatggcatgaccacctcagagagggtggtggatctcctc
aaccaggcagcgctgatcaccaatgactcaaagatcacagtgctcagacaggtccaggag
ctgatcatcaacaaagaccccacactactggacaacttcctggatgagatcatcgctttc
caagtagacaagtcgattgaagtgcgaaaatttgtcatcggcttcattgaggaggcatgc
aagcgagacatcgagttactgctgaaactgattgcgaacctcaacatgctcctgagggac
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtcatcagtgagctccaggaggcctgctgggacatg
gtgtctgccatggctggggacatcatcctgttgttggactctgacaatgatggcatccgc
actcatgccatcaagtttgtggagggcctcattgtcaccctgtcaccccgaatggctgac
tcagagataccccgacgccaggagcacgacatcagcttggaccgtatccctcgggaccac
ccctacatccagtacaacgtgctgtgggaagagggaaaggcagccctggagcagctgctc
aagttcatggtgcaccccgccatctcctccatcaacctgaccacagcactgggtgccctc
gccaatatcgcccgccagagacccatgttcatgtccgaggtgatccaggcctatgaaacc
ctgcatgccaacctccccccgacgctggccaaatcgcaggtgagcagcgtgcgtaagaac
ctcaagctgcacctgttgaatgtgctgaagcaccccgcctccctggagttccaggcccag
atcaccaccctgctggtggacctgggcacacctcaggccgagattgcccgcaacatgccc
agcagcaaggatgcccgcaagcggccccgggatgactcggattccacactcaagaagatg
aagctagagcccaacctgggggaagacgatgaggacaaggacttggagccaggcccatcg
ggaacctcgaaggcctcagcccagatctcaggccagtcagacacagatatcacagccgag
ttcttacagcctctgctgacacccgacaatgtggccaatctggttctcatcagcatggtg
tacctgcctgaggccatgcccgcatccttccaagccatctacacgcccgtggagtcagca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacgcagatgacggccgca
ggactagggccaggcgtggagcaaaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagcccgagagcgtcctgatcaagcgacgcctgccagcccagggccaagccatc
tcggtggtgggctccctgagctccatgtcccctctggaggaggaggcgccccaggccaag
aggaggccggagcccatcattcctgtcacacagccccggctggcgggtgccggtgggcgc
aagaaaatcttccgtctcagcgacgtgctgaagcccctgactgatgcccaggttgaggcc
atgaagctgggtgctgtgaagcggatcctgcgggcggagaaggctgtggcctgcagcggg
gcagcccaggtgcgcataaagatcctggccagcctggtgacgcagttcgactcgggccta
aaggcggaggtcctgtcctttatcctagaggatgtgcgggcccgcctggacctggtcttt
gcctggctctaccaggagtacaacgcctacctggcagccggggcctcgggcaccctggac
aagtatgaggactgcctcatccgcctgctctccggcctgcaggagaaaccggaccagaag
gatgggatcttcaccaaggtggtgctggaggccccgctcatcactgagagtgccctggag
gtgattcgcaagtactgcgaggacgagagtcgcacctacctgggcatgtccacgcttcga
gacctaatctttaagcgcccgtcccgccaattccagtatctgcacgtcctcctagacctc
agctcccatgagaaggacaaggtgcgttcccaggccttgctgttcatcaaacgcatgtac
gaaaaggagcagctccgagagtacgtggagaaatttgccctcaactacctgcagctcttg
gtccaccccaacccaccgtctgtgctgttcggagccgacaaggacacagaggtggcagcg
ccctggaccgaggagacggtgaagcagtgtctgtacctctacctggcccttctgcctcag
aaccacaagctcatccacgagctggcggccgtgtacaccgaggccattgctgacatcaag
cggacggtgctgagagtcattgagcagccgatccgaggaatgggcatgaactcgccagag
ctgctcctcctggtggaaaactgtcccaagggagcagagacgctggtcacccgatgtcta
catagcctcacagacaaagtccccccctccccagagctggtgaagcgggtccgagatctc
taccacaagcggctgccggacgtccgcttcctcatcccggtgcttaatgggctggagaag
aaagaggtgatccaggcgctgcctaaactcatcaagctcaaccccatcgtggtgaaggag
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcggccttgtcccccctg
aaccctggagagctgctgatcgcattgcacaacattgactcggtgaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctt
tcccgtctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgccaacgcaccaagccccagagcttccaggtcatcctgcagctgccaccccagcag
ctgggagccgtctttgacaagtgccccgagctccgcgaacccctgctggcccacgtccgc
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcttggaggcc
agcagcaagcaggagccggaggccaaggaggcacctgccgggcccctggaagaggacgac
ctggagcccctggccctggcaccggccccagcgccccggccccctcaggacctcatcggc
ctgcggctggcccaggaaaaggccttaaagcggcagctggaggaggaacagaagctgaag
cctggagcagtgggagccccctccacttcctccgtgtctccctcctcttcctcggcccgg
cccggcccccccgcgtcggaggaagccatggatttccgggaggaggggccggagtgcgag
accccggccatcttcatcagcatggatgacgactcggggctgaccgaggccgcgctgctg
gactccagcctggacgggcccctgcctaaggaggcagcggcgggcgggttgacctcaaag
gaagagcggagcccccagaccctcgcccctgccggagaagacgccgtgaagacccccagc
ccagcggccgaggaagcgggggacgccgagaccaaggggaacagctga
DBGET
integrated database retrieval system
