Microcebus murinus (gray mouse lemur): 105871647
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Entry
105871647 CDS
T07238
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mmur
Microcebus murinus (gray mouse lemur)
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmur03000
]
105871647 (RC3H1)
04121 Ubiquitin system [BR:
mmur04121
]
105871647 (RC3H1)
Transcription factors [BR:
mmur03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
105871647 (RC3H1)
Ubiquitin system [BR:
mmur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105871647 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
105871647
NCBI-ProteinID:
XP_012620539
Ensembl:
ENSMICG00000003000
UniProt:
A0A8C5UNW2
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All DBs
Position
2:complement(135058361..135135759)
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AA seq
1132 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSTAILPDE
GAVDLPSRKPPALPNGIVSAGNTVTQLIPRGTDPSYDSNLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPVPPRGPTDLPAMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA
PPFEPAPYQQGMYYTPPPQCVSRFVRPPPSAPDPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERFQQIEGYYP
VAPHPTQIRPSYLREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNAESKGMRDQRLDLQRRAVETSDDDLIPFGDRPTVSRFGAISRTTKTIYQGAGPIQAMA
PQGAPTKSINISDYSPYGTHGGWGGSPYSPHQSIPSQGHFSERERISMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLAGQPQPPPPPPKWPGMIS
SEQLSLELHQVEREIGKRTRELSMENQCSLDVKSKLNASKQAENGQPEPQNKVPAEDLTL
TFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNSDSQKSGVTPSSAP
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggctgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcatgcccttttgaccagaccactattaatacagac
attgagctcctccctgtgaattcagcattgctgcagctagtgggtgctcaggtacctgag
cagcagcccattactttgtgtagtggagttgaagatacaaaacattatgaggaagccaag
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ttgaatagcactactcaaagtgttctgagtcgcccaatgcagaggaagcttgtgactctg
gtccactgtcaactagtggaagaagaaggcaggattcgtgccatgagggcagctcgatct
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcaacaactctct
tccaatctttgggcagcagtcagggctagaggctgccagttccttggaccagcaatgcag
gaggaagctctaaaactggttctgctggccttagaagatggatctgctttgtcaagaaaa
gtattggttctcttcgtggtgcaaaggttggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgttcaacttctttatagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctcttcgg
cgagagcatgactcccagatagtgcagattgctatggaagcaggcttacgaattgcacca
gaccaatggtcctctttgctttatggagaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagaccccagcctcttttgcacagagtgttcaggaactaacaattgct
ctccagcggactggagacccagcaaacttgaaccgactaagaccccatttggagctgtta
gcaaacattgatcctagtccagatgctcctcctcctacttgggaacagctagaaaatggg
ctggttgctgtgcgtacagtagtacatggactggttgattatatccagaaccacagcaaa
aaaggagcagatcaacagcagcctccacagcatagcaaatataaaacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacattcacag
gaggaactagaaaaatttcgcaagatgaacaagcgcctggttcccagaagacccctgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcaacagctatccttccagatgaa
ggtgcagtggatctgcctagcagaaaacctcctgctctgccaaatggaattgtatcagca
gggaatacagtaacacagcttattccacgagggacggaccccagctatgattccaatctg
aaaccaggaaagatagatcatctaagcagtagtgctcctggatcccctcctgacctgcta
gaatctgtccctaagagtatttctgccttacctgtaaatccacatcctgtacctccaagg
gggccaacagatctgcctgccatgcctgtcaccaaaccacttcagatggtcccacgaggt
tctcagttatatccagcacagcaggcagatgtttattatcaggatcctcgaggagctgct
ccgccattcgaaccagcaccttatcaacagggtatgtactatactccaccaccacaatgt
gtgtcccgctttgtccgaccaccaccatctgctcctgacccaggtcctccatacttggat
cattatccaccctacctccaagatcgtgtagtaaactctcagtatggcacacagccacaa
cagtacccacctatgtacccacctcactatgatggccggcgagtataccctgctcagtct
tacacaagagaagagatattccgagaaagcccaatacccattgagattccacctgcagca
gtaccatcctatgtaccagaatccagagaaagattccaacagatagagggttactatcca
gtggctcctcatccaactcagatcagaccttcatacctcagagagcctccttatagccgg
cttcctcctcctccccagccccatcctagtctagatgaactacatcgccggcgaaaggaa
ataatggcccagctagaggaaagaaaggttatctctccacctccttttgcaccttcacca
acattgcctcctaccttccatcaagaggaatttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccagtactctccctggtcatgtgacaccattggctcc
tacattggaaccaaagatgcaaaaccaaaagatgttgtggcagcagggagcgtggaaatg
atgaatgcggagagtaaaggaatgagagaccagagattggatcttcagagaagagcagta
gaaaccagtgatgatgacctcatcccatttggagaccgaccaacagtgtctcggtttggt
gccatctctcgaactaccaaaacaatatatcagggtgccggcccaattcaggctatggca
cctcagggagctcccacaaaatctattaacatttcggattacagtccatatggaacccac
ggtggctggggaggttctccatactcacctcatcaaagcataccttctcagggacacttc
agtgagagggagagaatatccatgtctgaagtggccagtcatggaaaaccccttccatct
gctgagcgagaacagctacgactggaattgcagcaactgaaccaccaaattagtcagcag
acccagctgcgtggactagaggcggttagtaacaggctggtgttacagagggaggcaaac
accctggcaggccagccacagcccccaccaccacctccaaaatggcctggaatgatctca
agtgagcagttgagcttggaactgcaccaagtggaaagggaaatcgggaagagaacccgg
gaactgagcatggagaaccagtgttctctggacgtgaaaagcaaattgaatgctagtaag
caagcagagaatggacaaccagaaccacaaaacaaagttccagctgaggaccttacattg
acattcagtgatgtaccaaatggatcagccttgacacaagagaatatcagcctcctatca
aacaagaccagctctctgaacctatcagaggaccccgagggaggaggagataacagtgac
tcccagaaatcaggagttactcccagttctgctccctaa
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