Microcebus murinus (gray mouse lemur): 105877880
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Entry
105877880 CDS
T07238
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04611
Platelet activation
mmur04820
Cytoskeleton in muscle cells
mmur04926
Relaxin signaling pathway
mmur04933
AGE-RAGE signaling pathway in diabetic complications
mmur04974
Protein digestion and absorption
mmur05146
Amoebiasis
mmur05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105877880 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
105877880 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
105877880 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
105877880 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
105877880 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
105877880 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
105877880 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mmur00536
]
105877880 (COL3A1)
Glycosaminoglycan binding proteins [BR:
mmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105877880 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
105877880
NCBI-ProteinID:
XP_012632307
Ensembl:
ENSMICG00000014169
UniProt:
A0A8B7H710
LinkDB
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Position
8:complement(45789473..45828106)
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AA seq
1468 aa
AA seq
DB search
MMSFVQKGTWFLLTLLHSTVILAQQTQEAIDGGCSHLGQSYADRDVWKPEPCQICVCDSG
SVLCDDIICDDEELDCPNPEIPFGECCAVCPQPPTAPTRPPNGLGPQGPKGDPGPPGIPG
RNGEPGIPGQPGLPGPPGPPGFCESCPTGGQNYSPQFDSYDVKSGVGIGGIGGGYPGPAG
PPGPPGPPGTVGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPG
RPGERGLPGPQGMKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPG
PMGPRGSPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAG
SPGSSGSPGQRGEPGPQGHAGSPGPPGPPGSNGSPGGKGEMGPAGIPGAPGLMGARGPPG
PAGANGAPGLRGSAGEPGKNGAKGEPGARGERGEAGSPGIPGAKGEDGKDGSPGEPGANG
LPGAAGERGAPGFRGPAGPSGIPGEKGPAGDRGAPGPAGPRGAAGEPGRDGVPGGPGMRG
VPGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGPPGVMGFPGPKGNDGAPGKNGERG
SAGGPGPQGPPGKNGEAGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPG
EPGPKGDAGSPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPG
ASGSPGLQGMPGERGGPGSPGPKGDKGDPGGAGADGVPGKDGPRGPAGPIGPPGPAGQPG
DKGEGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGG
PPGIAGPPGGAGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGNNGNPGPPGPGG
SPGKDGPPGPAGNSGAPGSPGVSGPKGDAGQPGEKGPPGAQGPPGAPGPLGIAGITGARG
LAGPPGMPGPRGNPGPQGIKGEGGKPGANGLNGERGPPGPQGLPGLAGTAGEPGRDGNPG
SDGLPGRDGSPGGKGDRGESGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGPAG
PAGARGAPGAQGPRGDKGETGERGANGIKGHRGFPGNPGPPGSPGPSGHQGAVGSPGPAG
PRGPAGPGGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCC
GGGAAAIAGVGGEKSGGFSPYYGDEPMDFKINTEEIMSSLKSVNGQIERIISPDGSRKNP
ARNCRDLKFCHPELKSGEYWVDPNQGCKLDAIKVFCNMETGETCISANPSNVPRKNWWTD
SGADKKHVWFGESMNGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYYCKNSIAY
MDHDTGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAVR
LPIVDIAPYDIGGPNQEFGADVGPVCFL
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaggggacctggtttcttcttactctgcttcactccactgtt
attttggcacaacagacccaggaagctattgatggcggatgctcccatcttggtcagtcc
tacgcggatagagatgtctggaagccagaaccgtgccaaatatgcgtctgtgactcagga
tctgttctctgcgatgacataatatgtgacgatgaagaattagactgccccaacccagaa
attccatttggagaatgttgcgcagtttgcccacagcctcccacagctcctactcgccct
cctaatggtctcggacctcaaggccccaagggagatccaggccctcctggtattcctggg
agaaatggtgagcccggtattccaggacaaccaggtctccctggtcctcctggcccccct
ggattctgtgaatcatgccctactggtggtcagaactattctccccagtttgattcatac
gatgtcaagtctggagtaggaataggaggaatcggtggtggctatcctgggccagctggt
cccccaggccctcctggtccccccggtacagttggtcatcctggctcccctggttctcca
ggatatcaaggtccccctggtgaacctgggcaagctggtcctgcaggccctccaggacct
cctggtgctataggtccatctggtcctgctggaaaagatggagagtcaggtagacctggc
cgacctggagaacgaggattgcctggaccacaaggtatgaaaggtccagctggaattcct
ggattccccggcatgaaaggacacagaggcttcgatggacgaaatggagagaaaggcgaa
acaggtgctcctgggttaaagggtgaaaatggtcttccaggtgaaaatggagctcctgga
cccatgggtccaagagggtcccccggtgaaagaggacggcctggacttcccggagctgca
ggtgctcgtggtaacgatggtgctcgaggtagtgatggtcaaccaggtccccctggaccc
cctggaactgcaggattccctggatcccctggtgctaagggtgaagttggacctgcaggg
tctcccggttccagtggctctcctggacaaagaggagaacctggacctcagggacatgct
ggttctccaggtcctcctggccctcctgggagtaacggtagtcctggtggcaaaggtgaa
atgggtcctgccggcattcctggagctcctggattgatgggagcccggggtcctccagga
ccagcaggtgctaatggcgctcctggacttcgaggcagcgcaggtgagcctggtaaaaat
ggtgccaaaggagagccgggagcacgtggtgaacgtggtgaagctggttccccaggtatt
ccaggagctaagggtgaagatggtaaggatggatcacctggagaacccggtgccaatggg
cttcccggagctgcaggagaaaggggtgcccctggattccgaggacctgctggacctagt
ggtatcccaggagaaaagggtcctgctggagaccgtggtgctccaggccccgcagggccc
agaggagcagctggagaacctggccgagatggtgtccctggaggtccaggaatgaggggc
gtgcccggaagcccaggaggaccaggcaatgatggaaaaccagggcctcctggaagtcaa
ggagaaagtggtcgccccggtcctccagggccatctggtccccgaggtcctcctggtgtt
atgggtttccctggtcctaaaggaaatgatggtgctcctggaaagaatggagaaagaggt
agcgctggaggacccggccctcagggtccacctgggaaaaatggtgaagctggacctcaa
ggccccccaggacctactgggccaggtggtgacaagggagacacaggaccccctggtcca
caaggattacaaggcttgcccggtacaggtggtcccccaggagaaaatggaaaacccggt
gaaccaggaccaaagggtgatgctggttcacctggagctccaggaggcaagggtgatgct
ggtgcccctggggagcgtgggcctcctggattggctggagccccaggacttagaggtgga
gctggtccccctggacctgaaggaggaaagggtgctgctggtcctcctgggccacctggt
gcttctggcagtcctggtctgcaagggatgcctggagaaagaggaggtcctggaagtcct
ggtccaaagggtgacaagggtgatccaggtggtgcaggtgctgatggtgttccagggaaa
gacggtccaaggggtcccgctggtcccattggtccccctggtccagctggccagcctgga
gacaagggtgaaggtggtgccccgggacttccaggtatagctggacctcgtggtggccct
ggtgagagaggtgaacatggccctcccggacctgcgggcttccctggtgctcctggacag
aatggtgagcctggtggtaaaggagaaagaggtgccccaggtgaaaaaggtgaaggaggc
cctcctggaattgcaggaccccctggaggtgctgggcctgctggtcctcctggtccccaa
ggtgtcaaaggtgaacgtggcagtcctggtggtcctggtgctgctggcttccctggtgcc
cgtggtcttcctggtcctcctggtaataatggtaacccaggccccccaggccccggtggt
tctccaggcaaggacggccccccaggtcctgcaggtaacagtggcgctcctggcagcccc
ggtgtgtctggaccaaaaggtgatgctggccaaccaggagagaagggaccacctggcgcc
cagggccctccaggagctccaggcccacttggaattgcggggattactggagcacggggt
cttgcaggaccaccaggcatgccaggtcctaggggaaaccctggccctcaaggcatcaag
ggtgaaggtggtaaaccaggagctaatggtctaaatggagaacgtggtcctcctggaccc
cagggtcttcctggtctggctggtacagctggtgaacccggaagagatggaaaccctgga
tccgatggtctgccaggccgagatgggtcccctggtggcaagggtgatcgtggtgaaagt
ggctctcctggtgcccctggggctcctggtcatccaggcccacctggtcctgttggtcca
gctggaaagagtggtgacagaggagaaagtggtcctgctggccccgctggtcctgctggt
cctgctggtgcccgaggtgctcctggtgcccaaggcccacgtggtgacaaaggcgaaaca
ggtgaacgtggtgctaatggcatcaaaggacatcgaggattccctggtaatccaggcccc
ccaggctccccaggtccttctggtcaccaaggtgcagtcggtagtccaggacctgcaggc
cccaggggacctgctggacccggtggaccccctggcaaagacggaacaagtggacatcca
ggtcccattggaccaccaggccctcgaggtaacagaggtgaaagaggatctgagggctct
ccaggccacccaggacagccaggccctcccggaccacctggtgcccctggtccttgctgt
ggtggtggtgctgctgccatcgctggggttggaggcgaaaaatctggtggtttttcccca
tattatggagatgaaccgatggacttcaaaatcaacactgaagaaattatgagttcactc
aaatctgttaatggacaaatagaaagaatcattagtcctgatggttctcgtaaaaaccct
gctcggaactgcagagacctgaaattctgccatcctgaactcaagagtggagaatattgg
gttgatcctaaccaaggttgtaaattggatgctatcaaggtattctgtaacatggaaact
ggggaaacgtgcataagtgccaatccttccaatgttccacgtaagaactggtggaccgat
tctggtgctgacaagaaacacgtttggtttggagagtccatgaatggtggttttcagttt
agctatggcaatcctgaactgcctgaagatgtccttgatgtacagctggccttcctccga
cttctctccagccgggcctctcagaacatcacatattactgcaagaatagcattgcctac
atggatcatgacactgggaatgtaaagaaagccctgaggctgatgggatcaaatgaaggc
gaattcaaggctgaaggaaatagcaaattcacttacacagttctggaggacggttgcact
aaacacactggggaatggagcaaaacagtctttgaatatcgaacacgcaaggctgtgaga
ctacctattgtagatattgcaccctatgacattggtggtcccaatcaagaatttggtgcg
gacgttggccctgtttgctttttataa
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