Microcebus murinus (gray mouse lemur): 105877934
Help
Entry
105877934 CDS
T07238
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105877934 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmur03041
]
105877934 (SF3B1)
03036 Chromosome and associated proteins [BR:
mmur03036
]
105877934 (SF3B1)
Spliceosome [BR:
mmur03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105877934 (SF3B1)
Complex B
105877934 (SF3B1)
Complex C
U2 SnRNP specific factors
105877934 (SF3B1)
Chromosome and associated proteins [BR:
mmur03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105877934 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
105877934
NCBI-ProteinID:
XP_012632432
Ensembl:
ENSMICG00000013879
UniProt:
A0A8C5VFE6
LinkDB
All DBs
Position
8:38811480..38851832
Genome browser
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSINDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgacagcagatttgctggatatgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccaggatatcatgcccctgtggcattgcttaatgatataccacagtcaacagaacag
tatgatccatttgctgagcaccgacctccaaagattgcagaccgggaagatgagtacaaa
aagcataggcggaccatgataatttccccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacagcat
ttgactaaagaagaacgagaaattaggcagcagctagcagagaaagctaaagctggagaa
ctaaaagtcgtcaatggagcagcagcatcccagcctccgtcaaaaagaaaacggcgttgg
gatcaaacagctgatcagactcctggtgccactcccaaaaagctgtcaagttgggatcaa
gcagagactcctgggcataccccttccttaagatgggatgagacaccgggtcgtgcaaag
ggaagtgagactcctggagcaactccaggctcaaaaatatgggaccctacacctagccac
acaccagcgggagctgctactcctggacgaggcgatacaccaggtcatgcgacaccaggc
catggaggtgcaacttccagtgctcgtaaaaacagatgggatgagaccccgaaaacagag
agagatactcctggacatggaagtggatgggctgagactcctcgaacagatagaggtgga
gattcaattggtgaaacaccgactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagtcagatgggtggaagcactcctgttctgacccctggaaaaacaccaatt
ggcacaccagccatgaacatggctacccccactccaggtcacataatgagcatgactcct
gaacaacttcaggcttggcgttgggaaagagaaattgatgagagaaatcgcccactttct
gatgaagaattggatgctatgttcccagaaggatataaggtccttcctcctccagctggt
tatgttcctattcgaactccagctcgaaaactgacagctactccaacgcctttgggtggt
atgactggtttccacatgcaaactgaagatagaactatgaaaagcattaatgaccagcca
tccggaaatcttccatttttaaaacctgatgatattcagtactttgataaactattggtt
gatgttgatgaatcaacacttagcccagaagaacagaaagagagaaaaataatgaagttg
cttttaaaaattaagaatggaacaccaccaatgagaaaggctgcattgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctctactgatg
tctcctacacttgaggatcaagaacgtcatttacttgtgaaagtgattgatagaatactg
tacaaacttgatgacttagttcgaccgtatgtgcacaagatccttgtggtaattgaaccg
ctgttgattgatgaagattactatgctagagtggaaggccgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgagacctgatatagataacatg
gatgaatatgtccgtaacacaacagctagagcttttgctgttgtagcctctgccttgggc
attccttctttattgcccttcctaaaagctgtgtgcaaaagcaagaagtcctggcaagcg
agacacactggtattaagattgtacagcagatagctattcttatgggctgtgccatcttg
ccacatctgagaagtttagttgaaattattgaacatggtcttgtagatgagcagcagaaa
gttcggaccattagtgctttggccattgctgccttagctgaagcagcaactccttatggt
attgaatcttttgattctgtgttaaagcctctgtggaagggtatccgtcaacacagagga
aagggtttggctgctttcttaaaggctattggatatcttattcctctcatggatgcagaa
tatgccaactactatacgagagaagtgatgttaatccttattcgagaattccaatctcct
gatgaagaaatgaagaaaattgtgctgaaggtggtaaaacaatgttgtgggacagatggt
gtagaagcaaactatattaaaacagagattcttcctcctttttttaaacacttctggcag
cacagaatggctttggatagaagaaattaccgacagttagttgatactactgtggagttg
gcaaacaaagtaggtgcagcagaaattatatccagaattgtggatgatctgaaagatgaa
gctgaacagtacaggaaaatggtgatggagacaattgagaaaattatgggcaacttggga
gcagcagatattgaccataaacttgaagaacaactgattgatggtattctttatgctttc
caagaacagactacagaggactcagttatgttgaatggctttggcacagtggttaatgct
cttggcaaacgagtcaaaccatatttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatcagcgaaagttaggcagcaggcagctgatttgatttctcgaactgctgtt
gtcatgaagacttgtcaagaggaaaaattgatggggcacttgggtgttgtattgtatgag
tatttgggtgaagagtatcctgaagtattgggcagcattcttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctgctgcctagactc
acccccatcttaaagaataggcatgaaaaagtacaagagaattgtattgatcttgttgga
cgtatcgctgacaggggagctgaatatgtatctgcaagagaatggatgaggatttgcttt
gagcttttagagctcttaaaagctcacaaaaaagctattcgtagagctacagtcaacaca
tttggttatattgcaaaggccattggccctcatgatgtattggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgttgca
gaaacatgttcacctttcacagtactccctgccttaatgaatgaatacagagttcctgaa
ctgaatgttcaaaatggagtgttgaaatcactttcattcttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacacctttacttgaagatgctttgatggatagg
gaccttgtacacagacagacagctagtgcggtggtacagcacatgtcacttggggtttat
ggatttggttgtgaagattcactgaatcacttgttgaactatgtgtggcccaatgtgttt
gagacatcgcctcatgtaattcaggcagttatgggagccctggagggcctgagagttgct
attggaccatgtagaatgttgcagtattgtttacagggtttgtttcacccagcccggaaa
gtcagagatgtgtactggaaaatttacaactccatctacattggttcccaggacgctctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaactt
gactatatcttataa
DBGET
integrated database retrieval system
