Microcebus murinus (gray mouse lemur): 105878319
Help
Entry
105878319 CDS
T07238
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04066
HIF-1 signaling pathway
mmur04137
Mitophagy - animal
mmur04140
Autophagy - animal
mmur04148
Efferocytosis
mmur04659
Th17 cell differentiation
mmur04919
Thyroid hormone signaling pathway
mmur05167
Kaposi sarcoma-associated herpesvirus infection
mmur05200
Pathways in cancer
mmur05205
Proteoglycans in cancer
mmur05208
Chemical carcinogenesis - reactive oxygen species
mmur05211
Renal cell carcinoma
mmur05230
Central carbon metabolism in cancer
mmur05231
Choline metabolism in cancer
mmur05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
105878319 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105878319 (HIF1A)
04137 Mitophagy - animal
105878319 (HIF1A)
04148 Efferocytosis
105878319 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
105878319 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
105878319 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105878319 (HIF1A)
05205 Proteoglycans in cancer
105878319 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
105878319 (HIF1A)
05230 Central carbon metabolism in cancer
105878319 (HIF1A)
05231 Choline metabolism in cancer
105878319 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
105878319 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
105878319 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
105878319 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmur03000
]
105878319 (HIF1A)
Transcription factors [BR:
mmur03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105878319 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
105878319
NCBI-ProteinID:
XP_012633103
Ensembl:
ENSMICG00000002224
LinkDB
All DBs
Position
3:complement(40261885..40304380)
Genome browser
AA seq
827 aa
AA seq
DB search
MEGAGGANDKKNRISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNNNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC
VLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTE
TDDQQLEEIPLYNDVMLPSSNEKLQNINLAMSPLPASETPKPLRSRADPALNQEVALKLE
PNPESLELSFTMPQIQDQPASPSDGSTRQSSPEPASPSEYCFYVDSDMVNEFKLELVEKL
FAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLETSSSSPQSASPQSTI
TVFQQTQIQEPTVNATTDTATTDELKTVAKDGMEDIKILIASPSPTHVHKETTSAATSPY
SDTQSPTASPNRAGKGVIEQTEKSHPRSPNVLSVALSQRTTVTKEELNPKILALQNAQRK
RKMEHDGSLFQAVGIGTLLQQPDDRATTTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLA
CRLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgcgaacgacaagaaaaataggataagttctgaacgtcgaaaa
gaaaagtctagagatgcagccagatctcggcgaagtaaagaatctgaagttttttatgag
cttgctcatcagttgccacttccccataatgtgagctcgcatcttgataaggcttctgtt
atgaggcttaccatcagctatttgcgtgtgaggaaacttctggatgctggtgatttggat
attgaagatgaaatgaaggcacagatgaattgcttttatttgaaagccctagatggtttt
gttatggttctcactgatgatggtgatatgatttatatttctgataatgtgaacaaatac
atgggattaactcagtttgaactaactggacacagtgtgtttgattttactcatccgtgt
gaccatgaggagatgagagaaatgcttacacacagaaatggccctgtaaaaaagggtaaa
gagcaaaacacacagcgaagcttttttctcagaatgaagtgtactttaactagtcgaggg
agaactatgaacataaagtctgcaacatggaaggtacttcactgcacaggccatattcat
gtatatgataccaacaataaccaatctcagtgtgggtataagaaaccacccatgacgtgc
ttggtgctgatttgtgaacccattcctcatccatcaaatattgaaattcccttagatagc
aagactttcctcagtcgacacagcctggatatgaaattttcttattgtgatgaaagaatc
accgaattgatgggatatgagccagaagaacttttgggccgctcaatttatgaatactat
catgctttggactctgatcacctgaccaaaactcatcatgatatgtttactaaaggacaa
gtcaccacaggacagtacaggatgcttgccaaaagaggtggatatgtttgggttgaaact
caagcaactgtcatatataacaccaagaattctcaaccacaatgcattgtatgtgtaaat
tatgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgc
gtcctcaaaccagttgaatcttcagatatgaaaatgactcagctgttcaccaaagttgaa
tcagaagatacaagtagcctctttgataaacttaaaaaggaacctgatgctttaactttg
ctggccccagctgctggagacacgatcatatctttagattttggcagcaatgacacagaa
actgatgaccaacaacttgaggaaattccactgtataatgatgtaatgcttccttcatct
aatgaaaaattacagaatataaatttggcaatgtctccattacctgcctctgaaactccg
aagccacttcgaagtagggctgaccctgcactcaatcaagaagttgcactgaaattagaa
ccaaatccagagtcactggaactttcttttaccatgccccagattcaagatcagccagcg
agtccttctgatggaagcactagacaaagttcacctgagcctgccagtcccagtgaatat
tgtttttatgtggatagtgatatggtcaatgaattcaagttggaattggtagaaaaactt
tttgctgaagacacagaagcaaagaatccattttccactcaggacactgatttagacttg
gagatgttagccccctatatcccaatggatgatgacttccagttacgttccttcgatcag
ttatcaccattagaaaccagttcttcaagccctcaaagcgcaagccctcaaagcacaatt
acagtattccagcagactcaaatacaagaacctactgttaatgccaccactgacactgcc
accactgatgaattaaaaacagtggcaaaagatggtatggaagacattaaaatattgatt
gcatctccatctcctacccacgtacataaagaaactactagtgctgcaacatcaccatat
agtgatactcaaagtccgacagcctcaccaaacagagcaggaaaaggagtcatagaacag
acagaaaaatctcatccaagaagtcctaatgtgttatctgttgctttgagtcaaagaact
accgttactaaggaagaactaaatccaaagatactagctttgcagaatgctcagagaaag
cgaaaaatggaacatgatggttcactttttcaagcagtaggaattggaacattattacag
cagccagatgatcgcgcaactactacatcactttcttggaaacgtgtaaaaggatgcaaa
tctagtgaacagaatggaatggagcaaaagacaattattttaataccctctgatttagca
tgtagactgctggggcaatcaatggatgagagtggattaccacagctgaccagttatgat
tgtgaagttaatgctcctatacaaggcagcagaaacctactgcagggtgaagaattactc
agagctttggatcaagttaactga
DBGET
integrated database retrieval system
