Microcebus murinus (gray mouse lemur): 105878439
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Entry
105878439 CDS
T07238
Symbol
CCDC88A
Name
(RefSeq) LOW QUALITY PROTEIN: girdin
KO
K25392
girdin
Organism
mmur
Microcebus murinus (gray mouse lemur)
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmur03037
]
105878439 (CCDC88A)
Cilium and associated proteins [BR:
mmur03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
105878439 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Mod_r
Motif
Other DBs
NCBI-GeneID:
105878439
NCBI-ProteinID:
XP_020141754
Ensembl:
ENSMICG00000017444
LinkDB
All DBs
Position
4:complement(3226766..3370666)
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AA seq
1875 aa
AA seq
DB search
MENEVFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKTE
SQRVNKKVNNDASLRIHNLSILVKQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEDIEPLLKNMALHLKRLIDERDEHSETIIELSEERDGLHCLPHGSSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEMELKRLQQENMNLLS
DARSARMYRDELDALREKAVRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISKTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR
STMDSVEGNTSKILKIEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
SKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM
AQLQLENKELESEKEQLKKGLELMKASCKKTERLEVSYQGLDTENQRLQKALENSNKKIQ
QLECELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLFKEIGIYKESCIRLKELEKENKELVKRATID
IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDRYKLLESKL
ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSSP
TVSGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQA
QILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENES
VIKEREELKSLYDSLIKDHEKLELLHERQASEYESLISKHGTLKSAHKNLEVEHKDLEDR
YNQLLKQKGQLEDLEKMLKVEQEKMLLENKNHEMVAAEYKKLCIENDRLNHTYSQLLYKS
GEVLQTDHKNFKSLLNNSKLGTNKIRKAESSKPKERRRERRDITSTQCLNDPVELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQ
DSQDSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQ
SMVLAGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSAGFRSKQLVNNK
DTTSFEDISPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNSQSR
PQSHSSGEFSLLHDHEAWSSSGSSPIQYWKRQTRSSPVLQHKMPETSESRAYHRIKTGSP
GSEIVTLQQFLEESNKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKDKPVSCGLARSVS
GKTPGDFYDRRTTKPEFVRPGPRKTEESYFISSAGKPLPGTQGKIKLVKETSLSRQSKDS
NPYATLPRASSVISTAEGTTRRTSIHDFLTKDSRLPVSVDSPPAAADSNTTAASNVDKVQ
ESRNSKNRSREQQSS
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaggtttttactccccttctggagcagttcatgaccagccccttggtcact
tgggttaaaacgtttggacctctggctgcaggaaatgggaccaacctggatgaatatgtg
gctttggtggatggggtattcttgaaccaggtcatgctccaaattaatcctaaaacggag
agtcagagagtaaataaaaaagtcaacaatgatgcttcactgagaattcataatctatcc
attttggtgaaacagataaaattttattaccaggagactttgcagcaattgatcatgatg
tcattgccaaatgtcttgatcattggcaaaaatcccttctctgaacaaggcacagaagaa
gttaaaaagctgcttttacttttactgggttgtgcagttcaatgtcagaaaaaagaagaa
tttattgaaagaattcaaggtttagattttgatacaaaagcagcagttgccgcacatatt
caagaggtaacccataatcaggaaaatgtgtttgatctgcagtggatggaagtaactgat
atgtctcaggaggacatagaaccactcttgaaaaatatggcattgcatctaaaaagactc
atagatgagagagatgaacattcggagactatcatagagctctctgaagagcgggatggt
cttcattgtctaccccatggctcttcatccgcacagtcaccctgtggttctccaggcatg
aagcgaacagaaagtcgacaacatctgtcagtggaactggcagatgctaaagccaagata
agaaggcttaggcaggaactagaggaaaagactgaacagttattagactgtaaacaagaa
cttgagcaaatggaaatggaactaaaaaggctgcaacaagagaacatgaatttgctttcg
gatgctcgttctgccagaatgtaccgagatgaattagatgcacttcgagagaaggcagtc
agagttgataagcttgaaagtgaagtcagcagatataaagagagactacatgatattgaa
ttttataaggcaagagttgaggaattaaaagaagacaatcaagttttattagagacaaaa
actatgttggaagaccaactagaaggaactcgagctcgttctgataaattacatgaatta
gaaaaagagaacttacaactgaaggctaaacttcatgatatggaaatggaacgagatatg
gatagaaaaaagattgaagaattaatggaagaaaatatgactttggaaatggcacagaaa
caaagtatggatgagtcattacatcttggctgggagctggaacagatatctaaaactagt
gaactttctgaagcaccacagaaatccttgggccatgaggtgaatgagttgacatcaagt
agattattaaagttggaaatggaaaaccagagtttgacaaaaactgtagaagagcttcgg
agtactatggattctgtagaaggcaatacttccaaaatcctgaaaattgaaaaagaaaat
caaagactaagtaaaaaggttgaaattcttgaaaatgagattgttcaagaaaagcaaagt
cttcagaattgtcagaatttaagcaaagatttaatgaaggagaaagctcagcttgaaaaa
acaattgaaacacttagagaaaattcagagagacagattaaaatattagaacaggaaaat
gaacatctgaatcaaacagtatcttcattaaggcagcgttctcagataagtgctgaagca
agagtgaaagacattgaaaaagaaaataaaattctccatgagtctattaaagaaacaagt
agcaaactaagcaagattgaatttgaaaaaagacaaattagaaaagaattggaacattat
aaagaaaaaggagaacgagcagaagaacttgaaaatgagttgcatcatcttgaaaaagaa
aatgaattgttacagaaaaagataactaatttaaaaattacttgtgaaaaaattgaagcc
ttagaacaagaaaattcagaattagaaagagaaaatagaaaattaaaaaaaacattggat
agctttaaaaaccttacttttcagctagaatccctagagaaagagaattcccaacttgat
gaggaaaatttagaactgcgaaggaatgtggaatctttgaagtgtgcaagcatgaaaatg
gctcagctacaactagaaaacaaagaactggaaagtgaaaaagagcaacttaagaaaggt
ttagagcttatgaaagcatcttgcaagaaaacagaacgcttagaagttagctaccagggt
ttagatacagaaaatcaaaggctacagaaagctctagagaacagcaataaaaaaatccag
caattagaatgtgaactgcaagacttagaaatggaaaatcaaacattgcagaaaaaccta
gaagaattaaaaatatctagcaaaagactagaacagctggaaaaagaaaataaatcatta
gaacaagagacttcccaactggaaaaggataagaaacaattggagaaggaaaataaaaga
ctccgacaacaagcagaaattaaagataccacattagaagaaaacaatgtgaagattgga
aatttggaaaaagaaaacaaaaccctattcaaagaaattggtatatataaagaatcttgt
attcgtctgaaagaattagagaaagaaaataaagagctcgtgaaaagagcaactattgat
ataaaaactttggttacattgcgtgaggatttggtgagtgaaaaattgaagactcaacag
atgaacaatgatctcgaaaaattaactcatgagcttgagaagatagggttaaataaagag
cgactattacatgatgagcagagtactgatgacaggtataaacttctggaatcaaaatta
gaatctactcttaagaagtcccttgaaataaaagaagaaaaaattgctgctttagaggct
cgattagaagaatccacaaattataaccagcaattacgccaagaacttaaaacagtgaaa
aaaaattatgaagccctcaaacagagacaagatgaggagaggatggtacagagctctcct
acagtatctggtgaagataacaaatgggagcgagaaagtcaagaaacaacaagagagctt
ctgaaagttaaagacagattaattgaagtagaaagaaataatgctacactgcaagcagag
aagcaagcattgaaaactcaactgaagcaacttgagacacagaacaataatttgcaggct
cagattcttgcacttcagaggcagacagtgtcattacaggaacagaataccactcttcaa
acacagaatgccaagcttcaggttgaaaattccacccttaattcccaaagtacctccctt
atgaaccagaatgcacaactcctaatccagcagtcttccttagaaaatgaaaatgaatct
gtaatcaaagagcgagaagagctaaaatctctctatgattctctgatcaaagatcatgaa
aagctggaacttcttcatgaacggcaggcttcagagtatgaatctcttatctctaaacac
ggaactctaaagtctgcccacaaaaatcttgaggtggaacataaagatcttgaagaccgt
tacaatcagttactaaaacagaaaggacagttggaagatttggaaaaaatgctcaaagta
gaacaggaaaaaatgctgcttgaaaataaaaaccatgagatggtagctgcagagtacaag
aaactttgtattgaaaatgataggttgaatcatacatatagtcaacttttatataagagt
ggtgaagttttacaaactgaccataaaaattttaaaagtcttctgaataattccaaactt
ggaacaaacaagattagaaaagctgaatcttcaaagccaaaggaacgaagacgcgagagg
agggatattacgtcaacccaatgcctgaatgacccagttgagttgctaagccaacttaaa
ggaaatttagaagaagaaaatcgacatctactagatcaaatccagacattaatgctgcag
aacagaacactattggaacagaacatggaaagcaaagatctttttcatgttgaacaaaga
caatacattgataaattaaatgaattaaggcggcaaaaggagaaattagaagagaaaatt
atggaccaatacaaattttatgacccatctcctcctagaaggagaggcaactggattact
ctaaaaatgagaaaactgataaaatctaagaaagatattaatcgagaacgtcagaaatct
ctgacattaacacctacccgttcagactccagtgaaggatttcttcagcttccccatcaa
gatagtcaagatagttcttcagtgggttcaaactccttagaagatggccaaaccttgggg
accaagaaaagcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaag
gataaagacaaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcag
tccatggtcctagcaggacagtggacaggtagtactgagaatttggaggttcctgatgat
atttcaacgggtaaaaggagaaaagaattgggagctatggccttctctactacagccatc
aacttttcaactgtcaactcttctgcaggcttcagatccaagcaattggttaataataaa
gatactacatcctttgaagacataagtccacaaggtattagtgatgattctagtacggga
tcaagagttcatgcttcaagaccagccagccttgatagtggcagaacatccactagcaat
agcaataataatgcttcactccatgaagtcaaagcaggtgcagttaatagccaaagtagg
ccacaaagccacagcagtggagaatttagcctccttcatgatcatgaggcttggtccagc
agtggtagcagtccaatccagtactggaaaagacaaactagatcaagtccagtgctccag
cacaaaatgcctgaaacgtcagagagtcgagcctatcacaggatcaaaactggttccccc
ggaagtgaaattgttactctgcaacagtttttggaagaaagcaacaagcttacctcaata
cagataaagtcatcaagtcaagagaatcttttagatgaagtaatgaaaagtttgtctgtc
tcatctgactttttgggaaaagacaaaccagttagttgtggtctggccagatcagtaagt
ggaaaaaccccaggagacttctatgatagacggacaactaagcctgagtttgtgagacct
ggtcctcgaaagactgaagaaagctacttcattagttctgcaggaaaacctttaccaggc
actcagggaaagataaaattggtaaaagaaacttctctgtcacgacaatcaaaagatagt
aacccttatgccactttacctcgtgcaagcagtgtgatctccactgccgaaggaactaca
cgaaggacaagcatccatgattttttgactaaggacagtagactgcctgtatcagttgat
tcaccaccagctgctgctgatagcaacaccactgcagcatctaatgtggacaaagtacaa
gaaagcagaaattcaaaaaacaggtcaagggagcaacaaagctcctaa
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integrated database retrieval system