KEGG   Microcebus murinus (gray mouse lemur): 105878638
Entry
105878638         CDS       T07238                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
mmur  Microcebus murinus (gray mouse lemur)
Pathway
mmur03420  Nucleotide excision repair
mmur04120  Ubiquitin mediated proteolysis
mmur05161  Hepatitis B
mmur05170  Human immunodeficiency virus 1 infection
mmur05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mmur00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105878638 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    105878638 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    105878638 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    105878638 (DDB1)
   05161 Hepatitis B
    105878638 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmur04121]
    105878638 (DDB1)
   03400 DNA repair and recombination proteins [BR:mmur03400]
    105878638 (DDB1)
Ubiquitin system [BR:mmur04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     105878638 (DDB1)
DNA repair and recombination proteins [BR:mmur03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      105878638 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      105878638 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 105878638
NCBI-ProteinID: XP_012633774
Ensembl: ENSMICG00000013703
UniProt: A0A8C5V863
LinkDB
Position
5:complement(4545288..4574575)
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcacagaagcccactgctgtgaacggctgcgtgacc
ggacattttacttcggctgaagatttgaacctgttgattgccaaaaacacgagattagag
atctatgtggtcactgctgaggggcttcggccagtcaaagaggtgggcatgtatgggaag
attgccgtcatggagcttttcaggcccaagggggagagcaaggacctgctgtttatcctg
acagctaagtacaatgcctgcatcctggagtataagcagagtggcgagagcattgatatc
attacgcgagcccatggcaatgtccaggaccgtatcggccgcccctcagagactggcatt
attggcatcattgaccctgagtgccggatgatcggcctgcgactatacgatggccttttc
aaggttattccactagatcgggacaataaagagcttaaggcctttaatatccgcctggag
gagttgcatgtcatcgacgtcaagttcctatacggttgccaagcacctaccatttgcttt
gtttaccaggaccctcaggggcggcacgtaaaaacctatgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaatgtagaagctgaagcttccatggtgatt
gcagtcccagagccctttgggggggccatcatcattggacaagaatcaatcacctatcac
aatggtgacaaatacctggcgattgcccctcctatcatcaagcaaagcacaattgtgtgc
cacaatcgagtggaccctaatggttcaaggtacctgctgggagacatggaaggacggctt
ttcatgctgcttctggagaaggaggaacagatggatggcactgtcaccctcaaggatctc
cgagtggaactccttggggagacctctattgctgagtgcttgacatacctggataatggt
gttgtgtttgttgggtctcgcctgggcgactcccagcttgtgaagctcaacgttgacagt
aatgaacaaggttcctatgtagtggccatggaaacctttaccaatttaggacccattgtg
gacatgtgtgtggtggacctggagaggcagggacaggggcagctggttacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaatggaattggaatccatgagcatgcc
agcattgacttacccggcattaaaggcttatggccactacggtcggaacctaaccgtgag
actgatgacactttggtgctctcttttgtgggccagacaagagttctcatgttaaacgga
gaggaggtggaagaaacggaactgatgggtttcgtggacgatcagcagactttcttctgt
ggcaacgtggctcaccaacagcttatccagatcacatcagcatcggtgaggttggtctct
caagaacccaaagctctggtcagtgaatggaaggagcctcagggcaagaacattagtgtg
gcctcctgcaacagcagccaggtagtggtagctgtgggcagggccctctactacctgcag
atccatcctcaggagctccgacagatcagccacacagagatggaacatgaagtggcatgc
ttggacatcacaccattaggggacagcaatgggctgtcccctctttgtgccattggcctc
tggacagacatctcagctcgtatcttgaagctgccctcttttgaactactgcataaggag
atgctgggtggagagatcattcctcgctccattctgatgaccacctttgagagtagccac
tacctcctttgtgccttgggagatggggcacttttctactttgggctcaacattgagaca
ggcttgttgagcgaccgtaagaaggtgactttgggcacccagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaagtgaactacatgtgt
cccctcaactcagatggctatcctgacagcctggcactggccaacaacagcaccctcacc
attggcaccatcgacgagatccagaagctgcacattcgcacagttcccctctacgagtct
cccaggaagatatgctatcaggaagtgtcccagtgttttggggtcctttccagccgcatt
gaagtccaagacacaagtgggggcacaactgctctaaggcccagtgccagcacccaggcc
ctgtccagcagtgtcagctccagcaagctgttctccagcagcacagctcctcatgagacc
tcctttggagaagaggtggaggtgcacaacctccttatcatcgaccagcacacctttgaa
gtgcttcatgcccaccagtttctgcagaacgagtatgccctcagcctggtctcctgcaag
ctgggcaaagaccctaacacgtacttcatcgtgggcacagccatggtgtatcctgaagag
gcggagcccaagcagggtcgcattgttgtctttcagtattcagatggaaaactacagact
gtggctgaaaaggaagtgaaaggggctgtgtactccatggtggaatttaatgggaagctg
ctagccagcatcaatagcacggtgcggctttacgagtggacaacagaaaaggagctgcgc
accgagtgcaatcactacaacaacatcatggccctctacctgaagaccaagggggacttc
atcctggtgggcgacctcatgcgctcagtgctgctgctggcctacaagcccatggaagga
aacttcgaagagattgctcgagactttaatcccaactggatgagtgctgtggaaatcttg
gatgacgacaatttcctgggggctgaaaatgcctttaacttgtttgtgtgtcagaaggat
agcgctgccaccactgacgaggagcggcaacaccttcaggaggttggtctcttccacctg
ggagagtttgtcaacgtcttttgccacggctctctggtcatgcagaatctgggcgagacg
tctacccccacacaaggctcagtgctgtttggcacggtcaatggcatgattggcctagtg
acttcgctgtcagagagctggtacaacctcctgttggatatgcagaatcgactcaataaa
gtcatcaaaagtgtgggcaagattgaacactccttctggagatcctttcacactgagcgg
aagacagaaccggccacaggcttcatcgacggcgacttgattgagagtttcctggatatc
agccgccccaagatgcaggaggttgtggcaaacctacagtatgacgatggcagcggtatg
aagcgagaggccactgcagatgacctcatcaaggttgtggaggagctaactcggatccat
tag

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