Microcebus murinus (gray mouse lemur): 105879723
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Entry
105879723 CDS
T07238
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03440
Homologous recombination
mmur03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105879723 (PALB2)
03460 Fanconi anemia pathway
105879723 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmur03400
]
105879723 (PALB2)
DNA repair and recombination proteins [BR:
mmur03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
105879723 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
105879723 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR5
Beta-prop_WDR19_1st
TX13_rpt
Motif
Other DBs
NCBI-GeneID:
105879723
NCBI-ProteinID:
XP_012635633
Ensembl:
ENSMICG00000007786
UniProt:
A0A8C5XCM5
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All DBs
Position
17:complement(18736485..18758867)
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AA seq
1187 aa
AA seq
DB search
MDEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQKAEKVKNTIKKTAEEQDCLPQ
QEISPQLNHSEPKNEVSLCDKLQINTHFDEKTGEKTSITLDVEPGSFNPGDGQEGLFIQR
TDDIQEHLSHRASGPDGRKRQSKMPGRSKKPQKRTFISQERECVFDTDSLILSKKRLQGE
ICSKNRKSPVTEIRTHLSNSPKSELPDCPGPVTETDGEGVLIPPTAKPEGSVDTLLRSTN
FPKETIIPLHTSSDSSNSQYLEHKPPEGNCELIIQGLKNVSLASSVNLEAQSKKMTIFTE
FPLVNKAISASGQLSRSHNLEADNSCSINEVTYNNLSANENQNLKEQNHTETSLQSSSNA
LDGRNECLQENEALGQSKSLGLEAISPVSTENQIYSCTMLEGLLFPAEYYVRTTRHMSNC
QRKVALEAVIQSHLGVRKKGSKNKNKKASENLYLSNEKTDQSEIRLSDTYTGQSSSRSPQ
KLLSLTEVKSPTGPTEDNDFSRKAVTQLTGRRHRGKRKSICLSALDHHEQLLPTSGTLDI
NSSGEEVILHKYGNKTAIIHAKRKVQGKEGHRQKEDFLSSSDNAYLSLDNDAFSVHFHKN
RMLSLKQLSSFLNITDFQLPDEDFGPLKLEKLKSSLERLIEPFESNIYGERHLKKENCIT
ILEELIPKQIDTEIEDLEKELTVLPGKAHPKMSDLKSQPTNKDLSSSILLFTPLNTLAPE
ESDRPTADMCSPAFPILGTTPAFGSQACYEKVSTEGVGQTCSTPQVSLLKDTVSLAGDST
TSPPKLVTSLHVSGRQRPPTCDCDSGPQTTPLPVESFTFKENQLCGNTCQELCKHSIEQT
EIADLPACDSLNPGYLQLVSKLKNPSGSCSVDVSAMWWERAGLKEPCIITACEYAVSLWK
PLDTWQWKNIYTWHFTEVPVLQIVPVPDVCNLVCVALGNLEIREIRALFCSPDDGSEKQL
LLKSGNIKAVLGLTKRRLVNSSGTLCDHQVEIMTFAEDGGNKEKQFLMPPEETVLTFAEV
QGMQEALLGTTVMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFVVLSHPCA
KESESLGSPVFQLIVINPKTTLNVGVMLYCLPQGQAGRFLEGDVKDHCAAAVLTSGAIAI
WDLLLGHCTAFLPPVPDQNWSFVKWSGTDSHLLAGQKDGNIFIYRYL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcctcccgggaagcccctcagctgtgaagagaaggaaaagttgaaggaaaaa
ttagcattcttgaaaagggaatacagcaagacactagcccgccttcagcgtgcccaaaaa
gctgaaaaggttaagaatactattaagaaaacagcagaagaacaagattgcttgccccag
caggaaatctcaccacagctaaaccactcagaacctaaaaatgaagtgtctctttgtgac
aagttgcaaatcaacacccattttgatgaaaaaactggagaaaagacatctatcacactt
gatgttgagcctgggtcctttaaccctggagatggccaagaaggattatttatacaaaga
acagatgacatccaggaacatctttcccacagggccagtggtcctgatggtagaaaaagg
cagagtaagatgccaggcaggagcaagaagccgcagaagagaacatttatttcacaggag
agagaatgtgtctttgacactgattcactcatactctctaaaaaaagactacagggagaa
atctgtagcaaaaatcgtaagtcaccggtaactgaaataagaactcacctttcaaattct
cccaagtccgaacttccagattgtccaggaccagttacagaaactgatggagagggtgta
ttaattccaccaactgccaaaccagaaggaagtgttgatacactcctaagaagtactaat
ttccccaaggagactattattcctttgcatacttcatcagatagcagtaatagtcagtac
cttgaacataagcctcctgaaggtaactgtgaacttattattcagggcttaaaaaatgtt
agccttgcttcatctgtaaacttagaggcacaaagcaaaaaaatgactatatttacagag
ttcccattagtaaataaagctataagtgcaagtggtcagctatctagaagtcacaattta
gaggcagataattcatgttctataaatgaagtcacttacaataacttatcagcaaatgaa
aaccaaaacttaaaagaacaaaatcatacagagacatctttacaatcttccagtaatgct
cttgatggtagaaatgaatgtcttcaggaaaatgaggctctaggtcaatctaagagtctt
ggcctagaagcaatctctcctgtttctacagaaaatcaaatatattcttgcacaatgctt
gaaggccttctgtttcctgcagaatattatgttagaacaacacgacacatgtcaaactgc
cagagaaaagtagctctggaggctgtaattcaaagtcacctgggtgtcaggaaaaaagga
tctaaaaataaaaataagaaagcaagtgaaaatttatacctttccaatgagaaaactgac
caaagtgaaattaggttgtctgacacatatacaggacaatcaagttcaagaagtcctcag
aaacttctctcattaactgaagtcaagtctcccactgggcccactgaagataatgatttt
tctaggaaggcagttacccagctaactggcagaagacacagaggaaaaagaaaatcaatc
tgcctctcagcattagatcaccatgaacaacttttgccaacttctggcaccttggacatt
aacagttctggggaggaagtcatcttgcacaaatatgggaacaaaacagcgattattcat
gctaagaggaaagttcaagggaaggaaggtcatcgtcaaaaagaggacttcctgtcttcc
agtgataatgcttacttatctttggacaatgatgctttcagtgttcattttcataaaaac
agaatgctgagtttaaagcaactgtcatcttttctcaatatcacagactttcagttacct
gatgaagactttgggcctcttaagcttgaaaaactgaaatcatccttagaaagattgatt
gaaccttttgaatcaaatatttatggagagaggcatcttaagaaggaaaattgtattact
attctggaggaactgattcctaaacaaatagacacagaaatagaggacttggaaaaggaa
cttactgttctaccaggaaaagcacatcctaaaatgtcagatctaaaaagccagcctaca
aataaggacctctcttcatccatattgcttttcactcccttaaatacacttgcacctgag
gaaagtgacagacctactgctgacatgtgttcgcctgctttccccatcttaggtactact
ccagcttttggctcccaagcatgctatgaaaaagtgtctacagagggtgtcggacaaact
tgctctacaccccaggtttctctcttgaaagacacagtcagtcttgctggtgatagtaca
accagcccaccaaaactggttaccagcctgcatgtgtcaggtaggcaaagaccacctacc
tgtgactgtgactctgggccccaaacaacacctctgcctgttgagtcattcactttcaaa
gaaaatcagctctgtggaaatacatgccaggagttatgtaaacattccattgaacagact
gaaatagcagatcttcctgcttgtgatagcttaaacccaggctacctacaattggtttca
aagttaaagaatccttcaggttcttgttctgtggatgtgagtgccatgtggtgggaaaga
gctggtcttaaagagccatgtatcataactgcttgtgaatatgcagtttctctttggaaa
cccctggacacttggcagtggaaaaacatttatacttggcacttcacggaggttccggta
ttacaaatagttccagtgcctgatgtttgtaatcttgtgtgtgtagctttgggaaattta
gaaatcagagaaatcagggcattattttgttcccctgatgatggaagtgaaaagcagttg
ctactgaaatctggaaatataaaagctgtgcttggcctaacaaagaggaggctagttaat
agcagtgggaccctttgtgatcaccaagtggaaatcatgacatttgcagaagatggagga
aacaaagaaaagcagtttttgatgccccctgaggaaactgtactaacttttgctgaggtc
caagggatgcaggaagctctgctaggtactactgtcatgaacaacattgttatttggaat
ttaaaaactggtcaacttctgaaaaagatgcacattgatgattcttaccaagcttcagtc
tgtcacaaagcctattcagaaatggggctcctatttgttgttctgagtcatccttgtgcc
aaagagagtgagtcgttgggaagtcctgtgtttcagctgattgtgattaaccctaagacg
accctgaatgtgggtgtgatgctgtactgtcttcctcaagggcaggctggaaggttcctg
gaaggtgacgtgaaagatcattgtgcagcagcagtcttgacttctggagcaattgccatt
tgggacttacttcttggtcattgcactgctttccttccacctgtccctgaccaaaattgg
tctttcgtgaaatggtcaggtacagattctcatttgctggctggacaaaaagatggaaat
atatttatataccgctacttgtaa
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integrated database retrieval system
