Entry |
|
Symbol |
CACNA1B
|
Name |
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
|
KO |
K04849 | voltage-dependent calcium channel N type alpha-1B |
|
Organism |
mmur Microcebus murinus (gray mouse lemur)
|
Pathway |
mmur04723 | Retrograde endocannabinoid signaling |
mmur05022 | Pathways of neurodegeneration - multiple diseases |
mmur05207 | Chemical carcinogenesis - receptor activation |
|
Brite |
KEGG Orthology (KO) [BR:mmur00001]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105882232 (CACNA1B)
04020 Calcium signaling pathway
105882232 (CACNA1B)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
105882232 (CACNA1B)
04725 Cholinergic synapse
105882232 (CACNA1B)
04728 Dopaminergic synapse
105882232 (CACNA1B)
04726 Serotonergic synapse
105882232 (CACNA1B)
04723 Retrograde endocannabinoid signaling
105882232 (CACNA1B)
04721 Synaptic vesicle cycle
105882232 (CACNA1B)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
105882232 (CACNA1B)
09164 Neurodegenerative disease
05016 Huntington disease
105882232 (CACNA1B)
05020 Prion disease
105882232 (CACNA1B)
05022 Pathways of neurodegeneration - multiple diseases
105882232 (CACNA1B)
09165 Substance dependence
05032 Morphine addiction
105882232 (CACNA1B)
05033 Nicotine addiction
105882232 (CACNA1B)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
105882232 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:mmur04040]
105882232 (CACNA1B)
Ion channels [BR:mmur04040]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105882232 (CACNA1B)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
10:98292058..98452322
|
AA seq |
1277 aa
MVRFGDELGGRYGGAGSGERARGGGAGGAGGPGPGGLQPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFSNSSDADPVGDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNI
LFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDAVLKRA
ATKKSRNDLIHAEEGEDRFADLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMV
KAQSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPR
SYFRSSFNCFDFGVIVGSIFEVVWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLV
VSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVWEQRASQLRLQN
LRASCEALYSEMDPEERLRYATTRHLRPDMKTHLDRPLVVEPGRNGPRGPPGKARPEGAE
ATEGADPPRRHHRHRDKDKTSAPAAGDQDRADAPRTESGEPGGREERARPHRSHSKEAGG
AQEARGERARGPGPEGGRRHHRRGSPEEAGEREPRRHRGHRHASDQGRDGAACGAKGERR
ARHRGGPRAGTREPESGEEPARRHRTRHKAPPAHEAAEKEAAEEAEVPEGDKEKELRNHQ
PKELHCDLEAGGMMGVGPVHTLPSTCLQKVEEQPEDADNQRNVTRMGSQPSDPSTAVHIP
VTLTGPPGETTVVPSGNVDLEGQAEGKKEAEADDGVRSGPRPIVPYSSMFCLSPTNLLRR
FCHYIVTMRYFEMVILVVIALSSIALAAEDPVRADSPRNNVLKYMDYIFTGVFTFEMVIK
MIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFTGGSKGKDINTIKSLRVLRVLR
PLKTIKRLPKLKVGAWS |
NT seq |
3834 nt +upstreamnt +downstreamnt
atggtccgcttcggggacgagctgggcggccgctatgggggcgccgggagcggggagcgg
gcccggggcggcggggccggcggggcgggcggcccgggccccgggggtctgcagcccgga
cagcgggtcctctacaagcagtcgatcgcgcagcgcgcgcggaccatggcgctgtacaac
cccatcccggtcaagcagaactgcttcaccgtcaaccgctcgctcttcgtcttcagcgag
gacaacgtcgtccgcaaatacgccaagcgcatcacggagtggcctccgttcgagtacatg
atcctcgccaccatcatcgccaactgcatcgtgctggcgctggagcagcacctccctgac
ggcgacaagacgcccatgtccgagcggctggatgacacggagccctactttatcggcatc
ttttgcttcgaagccgggatcaagatcatcgccctgggcttcgtcttccacaagggatcc
tacctgcgcaacggctggaatgtcatggacttcgtggtcgtcctcaccgggatcctggcc
acggccggcaccgatttcgacctgcggactctgcgggctgtgcgggtgctcaggcccctg
aagctggtgtctgggattccaagtttgcaggtggtgctcaagtccatcatgaaggccatg
gttcccctgctgcagatcgggctgctgctcttcttcgccatcctcatgttcgccatcatt
ggcctcgagttctacatgggcaaattccacaaggcctgtttctccaacagctcagatgca
gatcccgtgggtgacttcccctgtggcaaggaggccccagcccggctgtgcgaaggcgac
actgagtgccgggagtattggccgggacccaacttcggtatcaccaattttgacaacatc
ttgtttgccatcttgacagtgttccagtgcatcaccatggagggctggaccgacatcctc
tacaatacgaacgacgcggccggcaacacctggaactggctctacttcatacccctcatc
atcatcggctccttcttcatgctcaacctggtgctgggtgtgctctcgggagagttcgcc
aaggaacgagagagggtggagaaccgccgcgctttcctgaagctccgccggcagcagcag
atcgagcgggagctcaacgggtacctggagtggatcttcaaggctgaggaagtcatgctg
gcagaggaggacaagaacgcggaggagaagtcccctttggatgcagtgctgaagagagca
gccaccaagaagagccgcaacgacctgatccacgcggaggagggcgaggaccgcttcgca
gacctctgtgccgtcggctcccccttcgcccgcgccagcctcaagagcgggaagacggag
agctcgtcctacttccgcaggaaggagaagatgttccggttcttcatccggcgcatggtg
aaggctcagagcttctactgggtggtgctgtgcgtggtggccctgaacaccctgtgcgtg
gccatggtgcactacaaccagccacagcggctcaccacggcgctgtactttgcagagttt
gtcttcctgggtctcttcctcacagagatgtccctgaagatgtacggtctggggcccaga
agctactttcggtcctccttcaactgctttgactttggggtcatcgtggggagcatcttc
gaggtggtctgggcggccatcaagccaggagcctcctttgggatcagcgtgctgcgggcg
ctgcgcctgctgaggatcttcaaggtcacgaagtactggaactctctgaggaacctggtg
gtatccctgctcaactccatgaagtccatcatcagcctcctcttcctgctcttcctattc
atcgtggtcttcgccctgctggggatgcagctgtttggggggcagttcaactttcaggac
gagaccccgacgaccaactttgacacgttcccggctgccatcctcaccgtgttccagatc
ctgacgggcgaggactggaacgcggtgatgtaccatggcatcgaatcgcaagggggagtc
agcaaaggcatgttctcttctttttacttcatcgtcctgacgctgtttggaaactacact
ctgctcaacgtcttcctggccatcgctgtggacaacctcgccaatgcccaggagctgacc
aaggacgaagaggagatggaagaagcagccaatcaaaagcttgctctgcaaaaggccaaa
gaagtggccgaagtcagccccatgtctgccgcgaacatctccatcgctgccaggcagcag
aactcggccaaggcgcgctcggtgtgggagcagcgggccagccagctgcggctgcagaac
ctgcgggccagctgcgaggcgctgtacagcgagatggaccccgaggagcggctgcgctac
gccaccacgcgccacctgcggcccgacatgaagacgcacctggaccgaccgctggtggtg
gagccgggccgcaacggcccgcggggtccccctggcaaagccaggcctgagggcgcagag
gccactgagggtgcggaccccccgcgcaggcaccaccggcaccgcgacaaggacaagacc
tcggcccctgcggccggggaccaggacagagcggatgcccctaggaccgagagcggggag
cccggcggccgggaggagcgggcgcggccgcaccgcagccacagcaaggaggccgggggc
gcgcaggaggcgcggggcgagcgcgcgcgaggcccgggccccgagggcggccggcgccac
caccggcgcggctcccccgaggaggcgggcgagcgggagccccggcgccaccgcggacac
cgccatgcgtccgaccagggcagggacggcgctgcgtgcggggccaagggcgagcggcgg
gcgcggcaccgcggcggccccagggctgggaccagggagccagagagcggagaggagcca
gcgcggcggcaccggacccgccacaaggcgccgcctgcgcacgaggctgcagagaaggag
gctgcggaggaggccgaggtccccgaaggagacaaggagaaggagctgcggaaccaccag
cccaaggagctgcactgtgacctggaggccggtgggatgatgggtgtgggccctgtgcac
acactgcccagcacctgtctgcagaaggtggaggaacaaccagaggatgcagacaatcag
cggaacgtcactcggatgggcagtcaaccctctgacccaagcactgctgtgcacatccca
gtgacactgacaggcccccctggggagaccacggtggtacccagtggcaacgtggacctg
gagggccaagcagaggggaagaaggaggcggaagccgacgacggcgtgaggagcggcccc
cggcccatcgtcccgtacagctccatgttctgcttgagccccaccaacctgctgcgccgc
ttctgccattacatcgtgaccatgcggtacttcgagatggtcattcttgtggtcatcgcc
ctgagcagcatcgccctggcggctgaggaccctgtgcgggcagactcccccaggaacaac
gttctgaagtacatggattacattttcacaggcgtcttcaccttcgagatggtgataaag
atgatcgacttgggactgctgcttcaccctggagcctacttccgggacctgtggaacatt
ctggacttcattgtggtcagtggggccctggtggcgtttgccttctcgagcttcacggga
ggatccaaagggaaagacatcaacaccatcaagtccctgagagtcctgcgtgtcctgcgg
cccctcaagaccatcaaacggctgcccaagctcaaggttggagcctggagttga |