Microcebus murinus (gray mouse lemur): 105883326
Help
Entry
105883326 CDS
T07238
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105883326 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmur04990
]
105883326 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
mmur04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
105883326 (SYNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
105883326
NCBI-ProteinID:
XP_012641841
Ensembl:
ENSMICG00000009429
LinkDB
All DBs
Position
28:complement(578015..774121)
Genome browser
AA seq
1074 aa
AA seq
DB search
MGTGDFICISMTAGAPWGFRLQGGKEQKQPLQVAKIRNQSKASGSGLCEGDEVVSINGNP
CADLTYPEVIKLMETITDSLQMLIKRPSSGTSEALISESENKNHEHLTHEGSAESTTLQI
RPATKTQYREFFITPVKSGVSLAEDQRSGPVCRENLKEETDLGYQRAPQTPDSQSGLLAE
EVIVRERAEGGWPGTMVELQLSLSQERHKDTSGPIVALLGAEKSKSPDPDPNLQQDGIVH
INSGSANEKADPCLRSSKIIQLSRGTELRVVQGREAGDARLPRVEVIVDCSDRQKTEGCR
LQAGKGCVDSSGEGGQSEAPPSLVSFAVSSEGTEQGEDPRSEKDHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPEPSSKGVLMFRRRRRRARRYTLVSYGTGRPARG
SAEEDEDEDGACAAELPGSSESEAEDNEELPSDVDVDGGAPIVNFDWDSGLAGVERKLSS
GDKMEMLPDTSGKGALMFARRRERMDQIAALRDEDGPQGPPGPGAPTPHGTDAGPAAARV
SVSRSYLELGRGPGPGGAPETAHGQRATPTNRTAQPFPGPALQPAAPYSPTRNVTSPVAD
FPAPPPYSAVAPLPDTFAVAGSSPAQPPPWPQPAPWAQPAFYDSSERIASRDERISVPAK
RTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGKRGAGAGGDSGPEEDYLSLG
AEACNFMQGGSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVWSPGVAPAQPPAFPTSNPSQ
GIVVSSIKIAQPSYPAARPASSLNLAGPFKGPQAAVASKNYTPKPPAPTPTVNAAYAGAV
GPSNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHAARAQSPTPSLPAGWKYSPNVRA
PPPMAYNPIHSPSYPLAAVKSQPSAAQAPKMGKKKGKKPLNALDVMKHQPYQLNASLFTF
QPPGAKDGLPQKSPAKVNSPLAMKQALPLRPVNAGSPPNVQASSVYSVPAYTSQPAFFAE
ATSPVSASPVPVAVPTSPKQESASSSYFVAPRPKFSAKKSGVTIQVWKPSVVEE
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggggattttatctgcatttccatgaccgccggggcgccctggggcttccga
ctgcaaggtggcaaggagcagaagcagcccttacaagtggcaaagattcgaaaccagagc
aaagcctccgggtcggggctctgtgagggggacgaagtggtttccatcaatggcaaccct
tgtgcagacctcacgtaccccgaagtcatcaagctcatggaaaccataacagactctctc
caaatgctcatcaaaagaccatccagtgggacaagcgaggctttgatctctgaaagtgaa
aacaaaaaccatgagcatctcacacacgaggggtctgcggaaagtaccaccctgcagatt
cgaccagccacaaagacccagtacagagagttcttcatcaccccggtcaagagtggagtt
tccctagctgaggaccaaagaagtggtcctgtttgtagagagaacttaaaagaagaaaca
gacttgggctaccaaagggctcctcaaacgcctgactcccaaagcggactcttggcagaa
gaagttatcgtaagggaaagggcagaaggggggtggccaggcactatggttgaactccaa
ctgtccctttcacaggagagacacaaggacactagtggccccatcgtggctctcctggga
gctgaaaaatctaagtctcctgacccagaccctaacttacaacaggatgggattgtccac
ataaattcaggctctgctaatgagaaagcagacccttgtctgaggtccagcaagataatc
cagctctccaggggtacagagttgagagtggtgcaggggcgcgaagcaggggacgcgagg
ctgccccgggtggaagtgatcgtggactgctctgacaggcagaagacagaagggtgcagg
cttcaggcaggaaaggggtgtgtggattcttcaggggaaggagggcagtcagaagcacct
ccttctctggtatcctttgccgtctcatcagaaggcacagagcagggggaagatccacgc
tcagaaaaggaccacagcagacctcacaagcaccgagcgcggcacgcacggctcaggagg
agtgaaagtctgtcagaaaagcaagtgaaagaagcaaagtccaaatgcaaaagcatcgcc
ctcctgctcacggacgcccccgagcccagctccaagggggtgttgatgtttaggcggcgc
cggcgcagggcgcggaggtacacgcttgtgagctacggcacgggccggccggcgcgcggg
tccgcggaggaggacgaggacgaggacggcgcgtgcgcagcggaacttccgggctccagc
gagtcggaggcggaagacaacgaggagctgccgtccgacgtcgacgtcgacggcggcgcg
ccaattgtgaacttcgactgggactcggggctggcgggcgtcgaaaggaagctgagcagc
ggggacaagatggagatgctgcccgacacctcgggcaagggagccctcatgttcgcccgg
aggagggagagaatggatcagatcgcggcgctgagggacgaggacgggccgcaggggccg
ccgggccccggagccccgactcctcacgggacggacgcgggcccggcggcggcgcgggtc
tccgtgagcagaagctacctcgagctgggccgcggccccggccccggcggggcccccgag
acggcgcacgggcagagggcgaccccgaccaacaggacggcgcagcccttcccggggccc
gcgctgcagccggcagccccctactccccgacgcggaacgtgacgagccccgtcgccgac
ttccctgcgccgccgccttactcggcggtcgcccctctgcccgacaccttcgcagtagcg
ggctcgagcccggcacagccccctccgtggccccagcccgccccctgggcccagcccgcc
ttctacgactcatccgagcgcatcgcctcccgggacgagcggatctccgtgcccgcgaag
agaacaggcatcctgcaggaggccaagaggagaagcaccacgaaacccatgtttactttt
aaagagcccaaagtcagcccaaatcctgaactcttgtcgctccttcaaaattcagaaggc
aaacggggtgccggagctgggggcgattctgggccggaagaagactacctcagcctggga
gccgaggcctgtaatttcatgcagggtggctctgctaagcaaaagaccccacctcctgtt
gctcccaaacctgcagtcaagtcctcgtcctcccagccagtaactccagtgtccccagtc
tggtctccaggagtggctccagcccagcctcctgccttccccacgtcaaacccatcgcag
ggcattgttgtctcctccatcaaaatagcccagccttcctaccctgcggcccggcccgcc
agttctttgaacctggctggtcctttcaaagggccacaagcagcagtagccagtaagaat
tacacacctaagccaccggctcctaccccgaccgtcaacgctgcttatgctggtgcagtg
ggaccatccaatgagcttccaggaatgagtgggaaaggagcccagctcttcgccaaaagg
cagtcgaggatggagaagtatgtggtcgattcagatacggtgcaggcgcacgctgctcga
gcccagtctcccactccttctctgccggccggttggaagtactctcccaatgtccgagca
cctcctcccatggcctacaatcccatccactccccgtcctaccccctagctgctgtcaag
tctcagccatcagccgcacaggcccccaaaatgggcaagaaaaagggcaagaagcccctc
aatgctctggatgtcatgaagcaccaaccataccagctgaacgcatccttgtttactttc
caacctccaggcgcaaaggatggcctcccccaaaagtcaccagccaaggtcaattcaccc
ctggccatgaagcaagctctccccctgcggccagtgaacgctggctcaccccccaacgtg
caggcttcatcggtgtactcggtacccgcctacacctctcagcctgccttctttgcagag
gccacctcaccggtcagtgcctccccagtgcctgtggccgtccccacatctccaaagcag
gaatcagcctcatcatcttatttcgtggcaccaaggccaaaattctcagccaagaaaagt
ggtgtcacaattcaggtgtggaaaccatctgttgtggaagagtaa
DBGET
integrated database retrieval system