Microcebus murinus (gray mouse lemur): 105885637
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Entry
105885637 CDS
T07238
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105885637 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmur03019
]
105885637 (XAB2)
03041 Spliceosome [BR:
mmur03041
]
105885637 (XAB2)
Messenger RNA biogenesis [BR:
mmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105885637 (XAB2)
Spliceosome [BR:
mmur03041
]
Complex B
Other components
Prp19-related factors
105885637 (XAB2)
Complex C
105885637 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
105885637
NCBI-ProteinID:
XP_012646209
Ensembl:
ENSMICG00000010546
UniProt:
A0A8B7I8U8
LinkDB
All DBs
Position
24:complement(6450152..6458850)
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AA seq
855 aa
AA seq
DB search
MVVMARLSRAERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctctcgcgggccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctcagtcaaatgctggctccgc
tacatcgagttcaaacagggtgccccaaaacccaggctcaatcagctgtatgagcgggcg
ctcaagcttctgccctgcagctacaaactctggtaccgctacctgaaggcacgccgggca
caggtgaagcatcgctgtgttactgaccctgcctatgaagatgtcaacaactgccacgag
agagcctttgtgttcatgcacaagatgccccgtctgtggctggattattgccagttcctg
atggaccaggggcgtgtcacacacacccgccgcaccttcgaccgtgccctccgggcactg
cccatcacgcagcactctcgcatctggcccttgtacctgcgcttcctgcgctcacaccca
ctgcccgagacagccgtgcgaggctaccggcgcttcctcaagctgagccctgagagtgca
gaggagtacatcgagtacctcaagtccagtgaccggctggatgaggccgcacagcgcctg
gccaccgtggtgaatgacgagcgcttcgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctgtgcgacctcatctcccagaacccggacaaagtgcagtccctcaatgtg
gatgccatcatccgtgggggcctcacccgcttcaccgaccagctggggaagctctggtgc
tccttggccgactactacatccgcagtggccacttcgagaaggctcgggacgtgtacgag
gaggccatccggacggtgatgactgtgcgggacttcacgcaggtgttcgacagctacgcc
cagttcgaggagagcatgatcgccgctaagatggagaccgcctcagagctggggcgtgag
gaggaggatgatgtggacctggagctgcgcctggcccgctttgagcagctcatcagccgg
aggcctcttctcctcaacagcgtcttgctgcgccagaacccgcaccacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccggccccgggagatcatcaacacgtacacggag
gcagtgcagacggtggaccccttcaaggccacaggcaagccccacacgctgtgggtcgcg
tttgccaagttctatgaggacaacgggcagctggatgatgcacgcgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggacgacctggccagcgtgtggtgccagtgtggg
gagctggagctccgacacgagaactatgacgaggccttgcggctgcttcggaaggccacg
gcactgcccgcccgccgggccgagtacttcgacggctcggagcccgtgcagaaccgcgtg
tataagtccctgaaggtgtggtcgatgctcgccgacctggaggagagcctcggcaccttc
cagtccaccaaggccgtgtacgaccgcatcctggaccttcgcattgccacgccccagatt
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaagagagcttcaaggcg
tatgagcgtggcatctcgctgtttaagtggcccaatgtgtccgacatctggagcacctac
ctgaccaaattcattgcccgctacgggggccgcaagctggagcgggcacgggacctcttc
gagcaggcgctggacggctgcccccccaaatacgccaagaccctgtacctgctgtatgca
cagctggaggaggaatggggcttggcccggcacgccatggccgtgtacgagagggccacc
agggccgtggagcctgcccagcagtacgacatgttcaacatctacatcaagcgggcggcc
gagatctacggagtcacccacacccgcggcatctaccagaaggccatcgaggtgctgtcg
gacgagcacgcccgcgagatgtgtctgcggttcgcggacatggagtgcaagctcggggag
atcgaccgcgcccgggccatctacagcttctgctcccagatctgcgacccccggacaacc
ggcgcgttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
aaggagatgctgcgcattcgccgcagcgtgcaggccacgtacaacacgcaggtcaacttc
atggcttcgcagatgctcaaggtgtcgggcagcgccacaggcaccgtgtccgacctggcc
cccgggcagagcggcatggacgacatgaagctgctagagcagcgggcggagcagctggcg
gccgaggccgagcgggaccagcccccgcgggcccagagcaagatcctgtttgtgaggagc
gacgcgtcccgggaggagctggcggagctggctcagcaggtcaaccccgaggagatccag
ctgggtgaggacgaggacgaggacgagatggacctggagcccaacgaggtccggctggag
cagcagagcgtgccggccgcggtgttcgggagcctgaaggaagactga
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