Microcebus murinus (gray mouse lemur): 105885833
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Entry
105885833 CDS
T07238
Symbol
SYNPO
Name
(RefSeq) synaptopodin isoform X1
KO
K21112
synaptopodin
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105885833 (SYNPO)
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
105885833
NCBI-ProteinID:
XP_012646567
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All DBs
Position
23:32628518..32684851
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AA seq
1152 aa
AA seq
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MLGPHLPPPPLGASEGRPAPCAFRIPDGSYRCLALEAEESSGEEGQQGEAGLMDLEEDEG
VSRSGDSSACRATQGSPPLPEALELQPPSCSREVQRGPQQDRPGQDWDVAKAQQVTPTSP
SPGPGPRVAQKPALGRSTSLTEKDLKEAKARSQQIAAQLTTPPSSNSRGVQLFNRRRQRV
NEFTLESHGQRGPKPSQESLRVLPASPPGHAPGLSLSPTSPPEPGAPRHPNPQSPGRGVP
GHSMEGYSEEASLLRHLERVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSPPTP
PAAEVHSPAADVNQNLSSPSATLTTPASNSSHNLPATDVNQNPPATVAPQSLPLASAQQN
SPEARLPANGSVPDAKPSTLCADGQAQGPGAEVRSSSLLIDKVSAPPPATSTFSREATLI
PGAGAPAPDFMSSSLLIDVQPHGLMVSAEQELSGRTTATTPTKVYSEVHFTLAKPPSVVN
RTARPFGVQAPGGTSQMERSPMIERRHFGEKASAPQPPSVADRSPRPQRHMMSHSPMVER
RLVGQRSPASERRPVGSFAPPPTYAETLSTAPPASRVRSPPSYSALYPSSDPKPSHLKGQ
AAPASKTGILEESMARRGSRKAMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVE
EEPFALGAEASNFQQEPAPRDRASPAAAEEAVPEWASCLKSPRIQAKPKPKPNQNLSEAS
GKGAELYARRQSRMEKYVIESSGPTELARCPSPTMSLPSSWKYSTNAPGAFRVASRSPAR
TPPASLYHGYLPENGVLRPEPTKQQPPYQLRPSLFVLSPIKEPAKASPRATSPRAASPRA
ASPAKPSSLDLAPSLPKAGLPPSPALPRPSRSSLGLCTSPGQDGLQPTAVSPPYSGDISP
VSPSRAWPPRAKQAPRPSFSTRNAGIEAQDRRESGPTSPPWTPGASRPPSSLDGWVSPGP
WEPGRASSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARR
KSASPRPAGAESLRPFSPPTAPPPPPPPPRMRSPQPARPGPASAPGAAFAPIPRSPLPAG
PSPCAGPQSPLPVPPRPFLYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGWNGSLRLK
RGSLPAEASCTT
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgctgggccctcacctgccacctccaccccttggggccagcgaagggaggcctgcgccc
tgcgccttccggatccccgacgggagctacaggtgtctggctctagaggccgaggagagc
agcggcgaggagggccagcagggagaggcggggctcatggacctggaagaggacgagggg
gtcagcaggagtggggacagctctgcctgcagggccacccaagggtcgccgccgctgccc
gaagccctggagctccagccgcccagctgctccagggaggtgcaaagggggccacagcaa
gacaggcccggccaggactgggatgtggcgaaggcccagcaggtgacaccaaccagcccc
agccctggccctgggcccagggtagcccagaaaccagcgctgggccggagcactagcctc
accgagaaggacctgaaggaggccaaggcgcggagccagcagatcgcggcccagctgacc
acccctcccagctccaattcccgcggcgtccagctcttcaacaggcgccggcagagggtg
aacgagttcaccttggagagccacggccagaggggaccgaagcccagccaggagtccctc
agagtgctccctgcaagccccccaggccatgccccagggctcagcctgagtcccacctca
ccgcctgagccaggcgctccgaggcaccccaatccccagagccccggcagaggggtccct
ggccacagcatggagggctactcagaggaggccagcttgctgcggcacctggagagggtg
gccagcgaggaggaggaggtgccactggtggtttatctgaaggagaacgcagccctgctg
acggccaatgggctccacctgtcccagaaccgggaggcccagcagtccccgccgacccca
cctgcagccgaggtccacagtccagccgcagatgtcaaccaaaacctctcctcgcccagt
gccaccctcaccacaccagcttctaacagcagccacaacctgccggccaccgacgtcaat
cagaaccccccggcaactgtcgccccgcagagcctgcctcttgctagcgcccaacagaat
tccccagaggcccgcctcccggcgaacggctcggtgccagatgccaaacccagcacgctg
tgtgccgacgggcaagcccaggggccaggagcggaggtgagatccagcagcctcctcatc
gacaaggtgtcagctccacctcccgccaccagcaccttctccagggaagccacgcttatt
cctggcgctggggccccagccccggatttcatgtccagctccctactcatcgacgtccag
ccccacggcctcatggtgtcagcagaacaggagctgtctgggcggacaactgccaccacg
cccaccaaggtgtacagtgaggtccacttcaccctggccaagcccccctccgtggtcaac
aggacggccaggcctttcggggtccaggcgccagggggcaccagccagatggagcgcagc
cccatgatagagagacgacattttggggagaaggcctcggctcctcagccccccagcgtg
gcagacaggagcccccggccacagagacacatgatgtcccacagccccatggtggaaagg
aggctggtggggcagcgcagcccagcctccgagagacgccctgtggggagcttcgccccg
ccccccacctacgctgagactttgtccacagcccctccggcttcccgggtccggtctccc
ccgtcttattctgccctgtaccccagctctgaccccaagccttctcatctgaagggccag
gcggcccctgccagcaagacgggcattctggaggagtcgatggcccgccggggcagccgg
aaagccatgttcaccttcgtggagaagcccaaggtgacccccaacccagacctgctggat
ctggtgcagacggccgacgagaagcggaggcagagagaccagggggaggtgggcgtggag
gaagagcccttcgcgctgggggctgaggcctccaacttccagcaggagccagcaccccgg
gacagggccagccccgcagcagctgaggaggccgtcccggagtgggcttcgtgcctgaag
tcgccccgaatccaggccaagccaaagcccaaacccaaccagaacctctccgaggcctcc
gggaagggggctgagctctacgcccgccgccagtcgcggatggagaaatacgtcatcgag
tcttcaggccccacggagctggcccgctgcccttcgcccaccatgtccctgccttcatcc
tggaaatactccacgaacgcccccggggccttccgagtggcctcccgaagcccagctcgg
accccgcctgcctccctctaccacgggtacctgcccgagaacggggtcctgcgcccggag
cccaccaagcagcagccgccgtaccagctgcggccctcgctctttgtgctctcgcccatc
aaggagcctgccaaggcctcgcccagggccacctcgcccagggccgcctcgcccagggcc
gcctcgcctgccaagcccagctccctggacctggcgcccagcctgcccaaggcgggcctc
cctccctcgcctgccctgcctcggccctcccgctcctccctgggcctctgcacctcgccc
ggccaggacggcctccagcccactgccgtgagccctccctacagcggcgacatctccccc
gtgtctccctccagggcgtggcctccccgagccaagcaggcacccaggccctccttctct
acccggaacgccgggatcgaggctcaggaccgccgggagagcgggcccacctccccgccc
tggacgccgggcgcgtcccggccgcccagcagcctcgacggctgggtgagcccggggccg
tgggagccgggccgcgcgagcagcatgagcagccccccgccgctgccgccgccgccgccc
atgtccccgtcgtggagcgagcgctccgtgtccccgctgcgacccgagaccgaggcgcgg
ccccccagccgccagctgcaggcgctcctggcgcgcaacatcatcaacgcggcccggcgc
aagagcgcctccccgcggccggcgggcgccgagagcctgcggcccttctccccgccgacc
gcgccgccgccgccgccgccgccgccgcgcatgcgctcgccgcagcccgcgcgcccgggc
ccggcctcggcgccgggggcagctttcgccccgatcccgcggagcccgctgcccgctggg
ccttcgccctgcgccggtccccagagcccgctgcccgtgccgcccaggcccttcctgtac
cgccgctcgcccacggactccgacgtctccctcgactccgaggactccggggccaagtcg
ccgggcatcctcggctataacatctgcccccgcggctggaacggcagcctgcggctcaag
cgtggcagcctccccgccgaggcctcctgcaccacctaa
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