Mycobacteroides abscessus subsp. massiliense GO 06: MYCMA_0241
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Entry
MYCMA_0241 CDS
T02177
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmv
Mycobacteroides abscessus subsp. massiliense GO 06
Brite
KEGG Orthology (KO) [BR:
mmv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmv03032
]
MYCMA_0241
03400 DNA repair and recombination proteins [BR:
mmv03400
]
MYCMA_0241
Enzymes [BR:
mmv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MYCMA_0241
DNA replication proteins [BR:
mmv03032
]
Prokaryotic type
DNA Topoisomerases
MYCMA_0241
DNA repair and recombination proteins [BR:
mmv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MYCMA_0241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AFN62414
LinkDB
All DBs
Position
complement(4222322..4225114)
Genome browser
AA seq
930 aa
AA seq
DB search
MRRLVIVESPTKARKIAGYLGDGYVVESSRGHIRDLPRAAADVPAKYKSEPWARLGVNVD
ADFEPLYIVSPDKKGTVTELKGLLKDVDELYLATDGDREGEAIAWHLLETLKPKVPVRRM
VFHEITEQAILAAAQDPRDLDNNLVDAQETRRILDRLYGYEVSPVLWKKVGRNLSAGRVQ
SVATRIIVQRERDRMAFRSAGYWDLGAELDAGKDNPAAKPPRFHARLVSVDALRVASGRD
FDSLGQVKETSNGPGVLVLDETRANALVAGLSQASLTVASAEEKPYTRKPYPPFMTSTLQ
QEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSDSALQAARSQAAELYGNEYVHP
SPRQYTRKVKNAQEAHEAIRPAGETFKTPGQLHSSLDNDEFRLYELIWQRTVASQMADAR
GTTLSLRLAGTATSGEQVVFTASGRTITFPGFLSAYVETVDELSGGEADDEERRLPQLKQ
GQSVTVAELSADGHTTNPPARYTEASLIKALEELGIGRPSTYSSIIRTIQDRGYVHKRGS
ALVPSWTAFAVIGLLEQHFGRLVDYDFTAAMEDDLDEIASGNERRTNWLNAFYFGGDHGV
EGSVARAGGLKRLVGVNLEEIDAREINSIKLFDDDQGRPIYVRVGKNGPYLERMVADPDG
EAGALIPQRANVKDGVTPDELTVEMAEQLFAIPQEGRTLGVDPETGHEIVAKDGRFGPYV
TEVLPAPPEPVEAEKPKRGAKKADGPKPRTGSLLKSMTLETVTLEDALKLLSLPRVVGVD
PANGEEITAQNGRYGPYLKRGTDSRSLATEDQIFTVTLDEALKIYSEPKRRGGQAASAAP
LRELGVDSATGKPMVIKDGRFGPYVTDGETNASLRKGDDVLSITDERASELLADRRARGP
VKRAKKAPAKAAKKAPAKKAPAKKAAKKAT
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
ttgcgacggctcgtcatcgtcgaatcaccgacgaaggcccgcaagatcgctggctacctc
ggcgacggatacgtcgtcgaatcttcgcgtggccacatccgggacctgccccgtgccgct
gccgacgttccggccaagtacaagtccgaaccctgggctcgcctcggggtgaacgtcgat
gcggatttcgagcccctctacatcgtcagcccggataagaagggcaccgtcaccgagctc
aagggcctgttgaaggacgttgacgagctctatctcgcgacggacggtgaccgcgagggt
gaggccatcgcctggcacctgctcgagaccctcaagcccaaggtgcccgtccggcgcatg
gtattccacgagatcaccgagcaggccatcctcgcggcggctcaggacccccgtgacctc
gacaacaacctcgtcgatgcgcaggagacccgccgcatcctggaccggctctacggctac
gaggtcagccccgtgctgtggaagaaggttggacgcaacctgtccgccggacgtgtgcag
tcggtggccacccggatcatcgtgcaacgcgaacgtgaccgcatggcgttccgcagtgcc
ggttattgggatctgggtgccgagctggatgccggcaaggacaacccggcggcaaaaccc
ccacgttttcatgcccggctggtcagcgtggacgccctgcgggtggcctcgggccgcgac
ttcgactcgctgggccaggtcaaggagaccagtaacggcccaggggtgctggtcctcgat
gagacccgcgccaacgccctggtcgcggggctgtcgcaggcctcgctgacggttgcctcc
gccgaggagaagccctacacgcgcaagccctaccccccgttcatgacctcgacgctgcag
caggaggccgggcgcaagctgcggttctcctccgagcgcaccatgagcatcgcgcagcgg
ttgtacgaaaacggttacatcacctatatgcgtaccgactccaccacgctctcggattcg
gcactgcaagcggcgcgatcacaggccgcggagttgtacggaaacgaatatgtgcatcct
tcgccacggcaatacacgcgcaaggtgaaaaatgcgcaggaagcgcacgaagccattcgt
ccggcgggtgagactttcaaaactccgggccaattgcattcgtcactcgataacgacgaa
ttccgtttgtacgagctgatttggcagcgcactgtcgcctcgcagatggcggacgcgcgc
ggtaccacgctgagcctgcggctagccggtaccgctacctccggcgagcaggtggtgttc
accgcgagcggtcgcaccatcaccttccccggcttcctgtccgcctacgtggagaccgtt
gacgagctcagcggtggcgaggccgatgacgaagagcgtcgtctgccgcagctcaagcag
ggccaaagcgtcaccgtggcggaactttccgcggacgggcacaccaccaacccgcctgcc
cgttacaccgaagcctcgctcatcaaggcgctggaagagctcggtattgggcgtccgtcg
acctactcgtccatcatccggacgattcaggatcgtggatacgtgcacaagcggggtagc
gcgctggtcccgtcctggacggcattcgcggtgatcggattgctggaacagcacttcgga
cgcctcgtcgactatgacttcacagccgccatggaggacgacctcgatgagatcgcctcc
ggaaacgagcgccgcacaaattggttgaacgcgttctactttggtggcgaccatggtgtg
gagggctcggtggcacgtgccggcgggctcaagcggctggtcggtgtcaacctcgaggaa
atcgacgcccgcgagatcaactcgatcaagctgttcgacgacgaccaggggcgccccatc
tacgtgcgggtcggaaagaacggtccgtacctggagcggatggtggccgatccggacggt
gaagccggggcactcattccgcagcgcgccaacgtcaaggatggcgtcacccccgacgag
ctgaccgtcgagatggccgagcagctgttcgcaatcccgcaggaggggcggacgctgggt
gtcgacccggagaccggacacgaaatcgtcgccaaggacggacgtttcggtccctacgtc
accgaggtgttgccggccccgccggaacctgtcgaggcagagaagccgaagcggggagcc
aagaaggccgatggccccaagccccgcaccggctcgctgctcaagtccatgaccttggag
acggtgacgctcgaggatgcgctgaaactgctctcgttgccgcgtgtggtcggggtcgat
cccgccaacggtgaggaaatcaccgcgcagaacggtcgctatggcccatacctcaagcgt
ggcaccgactctcgctcgttggccaccgaggaccagattttcaccgtcaccctcgatgag
gcgctgaagatctactcggagcccaaacgccgtggtggacaggcggcttcggctgccccg
ctgcgcgagctgggggtggattcggcgaccggcaagccgatggtgatcaaggacggccgt
tttggcccctatgtcaccgacggtgagaccaacgcgagcctgcgtaagggtgatgacgtg
ctgtcgatcaccgacgagcgggcctccgagctactcgccgaccgacgtgcacgtgggccg
gtgaagcgggctaaaaaggcacccgcgaaggctgccaagaaggctccggccaaaaaggcg
cccgcgaaaaaggctgcgaagaaggcgacttag
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