Mycobacteroides abscessus subsp. massiliense GO 06: MYCMA_13170
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Entry
MYCMA_13170 CDS
T02177
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mmv
Mycobacteroides abscessus subsp. massiliense GO 06
Pathway
mmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MYCMA_13170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmv03400
]
MYCMA_13170
Enzymes [BR:
mmv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MYCMA_13170
DNA repair and recombination proteins [BR:
mmv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MYCMA_13170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
RecD_N
NAT10_TcmA_helicase
SH3_13
PhoH
nSTAND3
AAA_16
AAA_28
TraI_hel_assoc_N
T2SSE
Herpes_Helicase
DUF3322
Mg_chelatase
NTPase_1
AAA_29
AAA_5
TrwB_AAD_bind
AAA_23
NACHT
SRP54
AAA
DO-GTPase1
CbiA
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AIC73011
LinkDB
All DBs
Position
4312531..4314189
Genome browser
AA seq
552 aa
AA seq
DB search
MSLVEAFGEILEPADVHVAQRLTALASETDESVELAIALAVRALRGGSVCVDLRAVAAQV
DMPSLPWPAADGWLAAVRASPLAGEPPVLRLFGDLLYLDRYWREEHQVCTDVQALLAAAH
PRTEVPTYERLFPQGFEEQQAAADIALSQGLTVLTGGPGTGKTTTVARLLALLAEQASAA
DAPPLRIALAAPTGKAAARLQEAVQLEVNKLDAVDRSRLAGLQATTLHRLLGSRPDTSSR
FKHHRGNRLPHDVIVVDETSMVSLTMMARLLEAVRPQARLLLVGDPDQLASVEAGAVLAD
LVEGLGCERVAALRTSHRFGEAIGALAAAVRDGDADRALEVLASGDPHVEWSTDSEGLRD
VLVPQALALRVASLSGDATAALAVLDEHRMLCAHRHGPFGVAHWNRQVERWITEETGEPH
WAPWYAGRPILVTANDYGLRLYNGDTGVTVAGPDGLRAVIGTASFATSRLVEVETMHAMT
IHKSQGSQANEVTVLLPSEDSRLLTRELFYTAVTRAKQRVRVVGSEAEVRAAIQRQAVRA
SGLGRRLRSGQP
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggtggaggcgttcggcgagatcctcgaacccgcggatgtgcatgtggcgcag
cggctgacggcgttggcgtccgagaccgatgagtcggtggagctggcaatcgcgctggcg
gtgcgggcactgcgcggagggtcggtgtgtgtggatttgcgcgcggtggcggctcaggtg
gatatgccctcgctgccgtggcccgctgccgatggctggctggcggcggtgcgggccagc
cccttggcgggtgagccgccggtgctgcggcttttcggcgacctgctgtacctcgatcgg
tactggcgcgaggaacatcaggtgtgcacagatgtgcaagcgttgctggccgccgcccac
ccgcgcaccgaagtgcccacctacgagcgacttttcccgcagggattcgaagagcagcaa
gccgccgccgacatcgcgctgtcgcagggcctgaccgtgctgacaggcgggccgggcacc
ggcaagaccaccacggtggcgcggctgttggcgctgttggccgagcaggcatcggcggcg
gatgcgccgccgttgcggatcgcgctggcggcaccgacgggcaaggcggcggcccgactg
caggaagcggtgcagctggaggtcaacaagctggatgccgtcgaccggtcgcggttggcc
gggttgcaggcgaccacgctgcatcgcctgttgggatcgcgccccgacacgtcgtcccgg
tttaagcatcatcgcggaaaccggttgccgcatgacgtgattgtcgtggatgagacgtcg
atggtgtcactgaccatgatggcgcgactgttggaggcggtgcgtccccaggcccgactg
ctgttggtgggcgatccggaccagctggcctccgtggaggcgggcgcggtgctggccgat
ctggtcgaaggtctcgggtgtgaacgcgtcgcggcattgcgcacctcgcaccggttcggc
gaggcgattggtgctcttgcggccgcggtgcgcgatggtgacgccgatcgcgcgctagag
gtgctggcctctggggatccgcatgtggagtggtcgacggattcagaggggttacgcgat
gtgcttgtcccccaggcacttgcattgcgtgtggcgagcctgtccggtgatgccacggcg
gcgcttgccgtgctcgacgagcaccggatgctatgtgcgcatcgccacgggccgttcggc
gtggcgcactggaaccgccaggtggagcggtggatcaccgaggagacgggcgagccgcac
tgggcgccctggtatgcgggaagaccgatcctggtcaccgccaatgactatggcttgcgt
ctgtacaacggtgacaccggtgtgacggtggccggacctgacggactgcgcgcggtgatc
ggcacggcgtcgtttgcgaccagccgtctggttgaggtggagaccatgcacgccatgacc
attcacaagtcacaaggcagccaggcgaatgaagtgacggtgctgctgccgtcggaagat
tcccggctgctgacacgcgagctgttttacacggcagtcacgcgcgccaagcagcgcgtg
cgggtggtgggctcggaggccgaggtgcgggccgcgatccaacggcaggcggtgcgggcg
tcggggctggggcggagattgcggtccggtcaaccgtga
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