KEGG   Mycobacteroides abscessus subsp. massiliense GO 06: MYCMA_1362
Entry
MYCMA_1362        CDS       T02177                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
mmv  Mycobacteroides abscessus subsp. massiliense GO 06
Brite
KEGG Orthology (KO) [BR:mmv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmv03021]
    MYCMA_1362
Transcription machinery [BR:mmv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MYCMA_1362
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_Crp_2 HTH_3 Sigma70_ECF HTH_23 HTH_31 MarR GerE DUF7343 HTH_24 HTH_Tnp_4 LacI
Other DBs
NCBI-ProteinID: AFN63504
LinkDB
Position
complement(2400973..2401791)
AA seq 272 aa
MECPVDVPETGHSQVKPRVGRATDDYADVPDMFRSLAGLAEHSDAYQRKHEEIVTRCLPL
ADNVARHFDRRGEDLEDLIQVARVGLLNAVNRFDPEKGASFLGFAVPTMMGEVRRHFRDH
GWSLHVPRAIRDRHAQISRATAELTQDLQRAPTAGELAAELGIDREEVVESLIAADAYQP
QSIEAPLSHGDQESKHLSDLLGNEDPALEHVTNREAVRPLLANLPLRERTVLELRFFKGM
TQSQIAAQIGVSQMHVSRILSDTLRYLREQMA
NT seq 819 nt   +upstreamnt  +downstreamnt
atggaatgccctgttgatgtaccggagaccggacactcacaggtgaaaccacgcgttggc
cgggcaactgacgactacgcggacgtaccggacatgtttcggtctctggccggcttggcg
gagcacagtgacgcataccaacgtaagcacgaggagatagtcaccagatgcctgccgctg
gcggacaatgtcgcacgtcatttcgatcgccgtggtgaagatctcgaggacctgatccag
gttgcccgagtgggcttgctgaatgcggtcaaccgttttgacccggaaaagggcgcgagc
tttctcggctttgcggttcctaccatgatgggggaggtacgccggcactttcgcgaccac
ggatggtcgctgcacgtaccgcgggccataagagataggcatgcccaaatatctagggcc
actgcggaattgacccaggatctacagcgggcgcctaccgccggggagttggcggcagag
ttgggtatcgaccgcgaagaggtcgtggaatctctgattgccgcggacgcctatcagccc
caatccatcgaagcgcccctcagccacggcgatcaggaatccaagcatctttccgacctg
ctggggaatgaagatccagccctggaacatgtgaccaaccgcgaggcagtacggcctctc
ttggccaatttgcccctgcgagagcgaaccgtgctcgagctccggtttttcaagggaatg
acccagagccagatcgccgcacagattggtgtttcgcagatgcacgtatcccggattctc
agcgacaccttgcgttacctgcgagaacagatggcgtag

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