Mycobacteroides abscessus subsp. massiliense GO 06: MYCMA_1414
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Entry
MYCMA_1414 CDS
T02177
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mmv
Mycobacteroides abscessus subsp. massiliense GO 06
Pathway
mmv03030
DNA replication
mmv03410
Base excision repair
mmv03420
Nucleotide excision repair
mmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYCMA_1414
03410 Base excision repair
MYCMA_1414
03420 Nucleotide excision repair
MYCMA_1414
03440 Homologous recombination
MYCMA_1414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmv03032
]
MYCMA_1414
03400 DNA repair and recombination proteins [BR:
mmv03400
]
MYCMA_1414
Enzymes [BR:
mmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYCMA_1414
DNA replication proteins [BR:
mmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MYCMA_1414
DNA repair and recombination proteins [BR:
mmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MYCMA_1414
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYCMA_1414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AFN63556
LinkDB
All DBs
Position
2294837..2297545
Genome browser
AA seq
902 aa
AA seq
DB search
MTAPATKTGTKQPTLLLLDGNSLAFRAFYALPAENFKTQSGLTTNAVYGFTSMLINLLRD
EAPTHVAAAFDVSRKTFRSDRYPEYKATRSATPDEFRGQIDITKEVLQALGITVLAEEGF
EADDIIATLATQGQAEGFKVFVVTGDRDSLQLVNEDVTVLYPRKGVSDLTRFTPEAVVEK
YGLTPSQYPDFAALRGDPSDNLPGIPGVGEKTASKWILEYGSLQELVDKADTVRGKVGDS
LRANLASVILNRELTDLVRTVPLPYAPAQLALAPWDRDQIHRLFDDLEFRVLRDRLFETL
EAVEPEVDEGFQLAGQALEPGTVAAWLAEHTGDGRRSGLAVVGTYAPYGGDATAVAIASA
DGDGAYIDTTTVTPDDEAALAEWLADAARPKALHEAKQAIHALAGRGWELGGVTSDTALA
AYLVRPGQRSFALDDLSLRYLRRELRAEDDGEQQLSLLDEDGAGDAKAAQAQMLRARAVI
DLADALDVELERIESAGLLTDMELPVQRVLAGLESVGIAVDTDHLSSLQNQFATGIREAA
DAAYAVIGKQINLGSPKQLQVVLFDELGMPKTKKTKTGYTTDADALQTLFDKTGHPFLEH
LLTHRDVTRLKVTVDGLLKSVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPVRTEAGRE
IRDGFVVGAGYRELMTVDYSQIEMRIMAHLSADEGLIEAFNTGEDLHSFVAARAFGVPID
EVTAELRRRVKAMSYGLAYGLSAYGLATQLKISNDEAKEQMDQYFSRFGGVRDYLRAVVD
QARKDGYTSTVLGRRRYLPDLDSGDRLRREAAERAALNAPIQGSAADIIKVAMITTDKAL
RDKGLRSRMLLQVHDELLFEVAEGERESLEALVRKTMGSAYPLDVPLEVSVGYGRSWDAA
AH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcgcctgcgacgaagaccggaaccaaacagccgaccctcctgctgctcgacggt
aactcgctggccttccgcgcgttctatgcgcttccggccgagaatttcaagacgcagtcg
ggcttgaccaccaacgcggtatacgggtttacctcgatgttgatcaatctgctgcgcgat
gaggcacccacacacgtggcggccgccttcgatgtctcccgcaagacgttccgctccgat
aggtaccccgagtacaaggccactcggtcggccacccccgacgagttccgtggacagatc
gatatcaccaaggaagtactccaggccttgggcatcacggtgctggcagaggaggggttc
gaggccgacgacatcatcgccaccctggccacccaggggcaggccgagggtttcaaggtg
ttcgtggtcacgggcgatcgcgactcgctacagctcgtcaacgaggacgtaacggtgctg
tacccacgcaagggtgtcagtgatctcacccgattcaccccggaagcggtagtcgagaag
tacggactcacgccctcccagtacccggacttcgcggcgctgcgcggtgacccgagcgat
aacctcccgggaattcctggagttggggagaagaccgcgtccaagtggatcctcgagtac
ggatcactccaagagctggtggacaaggccgataccgtgcgcggaaaggtgggggattcg
ctgcgcgccaacctcgcttcggtgatcctgaaccgcgaactgaccgatctggtgcggacg
gtgccgctgccctatgcgcccgcccagttggcgctggcgccgtgggatcgggaccagatt
caccggctgttcgacgacctcgagttccgggttctgcgcgaccggctgttcgaaaccctg
gaagcggtcgaacccgaggtggacgagggcttccagctggccggccaggcgctggagccc
ggcacggtcgccgcatggttggccgaacacaccggggatggccgccgtagcggtttggcg
gtggtcgggacctacgccccctatggcggcgatgctaccgccgtggcgatcgcgtccgcc
gatggcgacggcgcctatatcgacaccacgacggtgactccggacgatgaggcggcactg
gccgagtggctggccgatgcggcccgccccaaggcattgcatgaggcgaagcaggccata
cacgctttggccggccgcgggtgggagctcggcggagtgacctccgataccgcgctggct
gcgtatctggtgcggccggggcagcgcagcttcgcgctcgacgacttgtcgttgcggtat
ctgcgtcgcgaacttcgcgctgaagatgatggagagcaacagctctcactactggacgag
gacggcgcgggcgatgcgaaggcagctcaggcccagatgctgcgcgcccgtgcggtgatc
gatctggccgacgcgctcgatgtcgagctcgaacgcatcgaatcggcggggctgctcacc
gacatggagctgccggttcagcgggtgcttgccggtctggaatccgtcggtatcgcggtc
gacaccgatcatctgtcttcgctgcaaaatcagttcgccaccggcatccgcgaggctgcg
gatgccgcgtacgccgtgatcggtaagcagatcaacctgggctcgcccaagcagctgcag
gtggtgctgttcgacgagttgggtatgcccaagaccaagaagacaaagaccggttacacc
accgacgcggacgccctgcagacgctgttcgataagaccgggcatccgtttctggagcat
ctgctcacgcaccgtgatgtcaccaggctgaaggtgactgtcgacggtttgctcaaatct
gttgcggccgacgggcgtattcacaccacgttcaaccagaccatcgcggcgaccggtcgg
ctgtcctcgaccgaaccgaatttgcagaacatcccggtgcgtaccgaggccgggcgggag
atccgcgacggattcgtggtcggcgcgggctaccgcgagttgatgaccgtcgactacagc
cagatcgagatgcggatcatggcgcacctgtcggccgacgagggcctcatcgaggcattc
aacaccggtgaggatttgcactcgttcgtggcggcccgtgctttcggcgtgcccatcgac
gaggtcaccgcggagttgcgccggcgggtcaaggcgatgtcctacggcctggcatatggt
ctgtcggcctatggactggccacgcagctcaagatctccaatgatgaggccaaggagcag
atggaccaatatttctcgcggttcggcggggtgcgcgactatctgcgtgcagtggtcgat
caggctcgcaaggatggatacacctcgaccgtgctggggcgccgccggtacctgcccgat
ttggacagtggcgatcgtctccgccgcgaggccgcagaacgcgccgctctgaacgctccg
atccaggggagcgcggccgacatcatcaaggttgcgatgatcaccacggataaggcattg
agggacaagggcttacgatcacgaatgctcctgcaggtgcacgatgagctcctcttcgag
gtcgccgagggcgaacgcgagagcctggaggcattggtacgcaagaccatgggctcggcg
tatccactcgatgtgccgctcgaggtttccgtggggtacggccgcagctgggatgccgcg
gcacactga
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integrated database retrieval system
