Mycobacteroides abscessus subsp. massiliense GO 06: MYCMA_1470
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Entry
MYCMA_1470 CDS
T02177
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmv
Mycobacteroides abscessus subsp. massiliense GO 06
Pathway
mmv03030
DNA replication
mmv03430
Mismatch repair
mmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYCMA_1470
03430 Mismatch repair
MYCMA_1470
03440 Homologous recombination
MYCMA_1470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmv03032
]
MYCMA_1470
03400 DNA repair and recombination proteins [BR:
mmv03400
]
MYCMA_1470
Enzymes [BR:
mmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYCMA_1470
DNA replication proteins [BR:
mmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYCMA_1470
DNA repair and recombination proteins [BR:
mmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYCMA_1470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AFN63611
LinkDB
All DBs
Position
2222642..2226199
Genome browser
AA seq
1185 aa
AA seq
DB search
MSSSNSSFVHLHNHTEYSMLDGAAKIKPMLAEVERLGMSAVGMTDHGNMYGASEFYNVAA
ATGVKPIIGIEAYIAPASRFDTKRVFWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLF
KLSSLASFEGQLGKWARMDADLIAEHASGIIATTGCPSGEVQTRLRLGQESEALAAAAKW
QDIFGKDNFFLELMDHGLSIERRVREGLLEVGKKLGIPPLATNDCHYVTKDHAHNHEALL
CVQTGKTLSDPTRFKFDGDGYYLKPASEMRDLWDDAVPGACDNTLLIAERVQSYEDVWNF
KDRMPIFPVPEGEDQDSWLRKEVDRGLERRFEGVPGGVPDEYFTRAHYELDVIKQKGFPA
YFLVVGDLVSHAKEVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSA
PDIDIDFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIAD
RITKALPPPIMAKDIPVWGITNPEHERYKEAAEVRTLIDTDPDVRNIYQTALGLEGLIRN
AGVHACAVIMSSEPLTDAIPLWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGD
ALDNIKANRGIDLDLDHLPLDDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDI
VAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETFGLIVYQEQIMF
IAQKVASYSMGKADALRKAMGKKKLEVLEAEYKGFYEGMTNNGFSAAAVKALWDTILPFA
GYAFNKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVL
PPDVNESVHNFASVGEDIRYGLGGVRNVGANVVQSLIATREEKGAFTDFSDYLHKIDIAA
CNKKVTESLVKAGAFDSLGHPRKGLFLVQSDAVDSVLGTKKAEAMGQFDLFGGGGEDSVP
ASDIFAIKVPDDEWEEKHKLALEREMLGLYVSGHPLNGVAHLLSRQTDTQIPAILDGEVA
NDAVVKVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVLFFPQAYSVYGADIADDAVVL
VNAKVAIRDDRVSLIANDLVVPDFSQAADDRPVAVTMPTRQCTIDKVTALKQVLTRHPGT
NQVHLRLISGERVTTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcctcgaattcttcgttcgtgcacctgcacaaccacaccgagtactcgatgctc
gacggtgcagcgaagatcaagccgatgctcgccgaggtcgaacggctgggcatgtctgct
gtcggcatgaccgaccacggaaacatgtacggtgcgagcgagttctacaacgtcgccgcg
gccaccggagtcaaaccgatcatcggtatcgaggcctacatcgcccccgcgtcgcggttc
gacaccaaacgtgttttctggggcgatcccggacagaagtccgatgacgtctcgggctcg
ggctcgtatacccacatgaccatggttgccgagaacgccaccgggctgcggaacctgttc
aagctgtcgtcattggcctcgttcgaggggcagctgggtaagtgggcgcgcatggacgcc
gatctcatcgccgagcacgccagcggcatcatcgccaccaccggatgtccgtcgggcgag
gtgcagacgcgcctgcggctggggcaggagagcgaggcgcttgccgccgcggccaaatgg
caggacatcttcggcaaggacaatttcttcctggagctgatggaccacgggctgtccatc
gaacggcgggtgcgtgagggcctactggaggtcggcaagaagctgggcatcccgccgctg
gcgaccaacgactgccactacgtcaccaaggatcacgcgcacaaccacgaggcactgctg
tgtgtgcagaccgggaagacactctcggaccccacccgcttcaagttcgacggcgacggt
tactacctcaaacccgcgtccgagatgcgggacctctgggatgacgccgttcccggtgct
tgcgacaacacgctgttgatcgccgaacgggtgcagtcctacgaagacgtctggaacttc
aaggaccggatgccgatcttcccggtgcccgagggcgaggatcaagactcctggctgcgc
aaggaagtagaccgcggactggagcgccgcttcgagggagtcccggggggagtgcccgac
gagtacttcacccgtgctcactacgagctggacgtcatcaagcaaaagggtttccccgca
tactttctcgtcgtcggtgaccttgtctcccacgcgaaagaggtcggcatcagggttggc
cccggtcgcggttcggcggcaggttcgctcgtcgcctacgcgctcggcatcactaatatc
gacccgataccgcacggcctgctgttcgagcgattcctcaacccggaacgtccgtcggcg
ccggatatcgacatcgacttcgacgaccgtcgccgcggtgagatggtccgctacgccacc
gagaaatggggtagcgaccgcgtcgcgcaggtcatcactttcggcaccatcaagaccaaa
gccgcattgaaggactcggcgcggatccactacggccagccgggtttcgcgatcgccgac
cgcatcaccaaggcacttccgccgccgatcatggccaaggacatcccggtatggggcatc
accaaccccgagcatgagcgatacaaggaggccgccgaggttcgcaccctgatcgacacc
gatccggatgtgcgcaacatctaccagacagcgctcggtctggagggcctgatccgtaac
gccggcgtgcacgcctgcgcggtcatcatgagctcggagcctctgaccgacgccatccca
ctgtggaagcgcgcccaggacggcgccatcatcaccggctgggactatccgtcgtgtgag
gccatcggcttgctgaagatggacttcctgggcctgcgcaacctcacggtcatcggcgat
gccctggacaacatcaaggccaaccgcggtatcgatctggacctggaccatctgccgctc
gatgacccggcgacttacgaattgctttcccgtggcgacactctcggcgtcttccagctc
gatggtgggccgatgcgtgatctgttgcgccggatgcagcccaccgggttcaacgacatc
gtcgccgtgctggcgctgtaccgccccggaccgatgggcatgaacgcgcacaacgactat
gccgaccgtaagaacggccgccagcccatcaagccgattcatcccgagctggaggaaccg
ctcaaggacatcctggccgagacgttcggcctgatcgtctaccaagagcagatcatgttc
atcgcccagaaggttgcctcatactcgatgggtaaggccgatgcgctgcgcaaggccatg
ggtaagaagaagctcgaagtccttgaggccgagtacaagggcttctacgagggcatgacc
aataacggcttttccgcggcggcggtgaaagcgttgtgggacaccattcttccgttcgcc
gggtacgcgttcaacaagtcgcacgctgccgggtacgggctggtgtccttctggaccgcc
tacctcaaggccaactaccccgccgaatacatggcgggtctgctgacatcggtcggcgac
gacaaggacaaagcggccgtgtatctcgccgactgccgccgcctgggcatcacggtgctg
ccacctgacgtgaatgaatccgtgcacaacttcgcgtctgtgggtgaggacatcagatat
gggctcggcggtgtgcgcaacgtcggcgccaacgtggtgcagtccctcatcgcgacccgg
gaggaaaagggtgccttcaccgacttctcggattacctgcacaagatcgatatcgcggcc
tgcaataagaaggtcacggaatctctggtgaaggcgggggcattcgactcactagggcat
ccgcgcaaggggcttttccttgtgcagtccgacgcggtcgactcggtgctcggcaccaag
aaggccgaagccatggggcagttcgatctattcggtggcggcggggaagacagcgtcccg
gcctccgatatttttgcgatcaaggttcccgacgacgaatgggaagaaaagcacaagctg
gccctggaacgagagatgctggggctgtacgtgtccggacatccgctcaacggcgtggcg
cacctactcagcaggcagaccgatacccagatccccgcgatcctcgatggcgaagtcgcc
aatgatgccgtagtcaaggtcggcggcatcttggcctcggtgaaccgccgtgtcaacaag
aacgggatgccgtgggcctcggcgcaactggaggatctcacgggtggcatcgaggtgctg
ttcttcccgcaggcctactcggtgtacggcgcagatatcgccgatgatgccgtggtgctc
gtcaacgcgaaggtcgcgatccgggacgacagggtctcgctgatcgccaatgacctcgtg
gtgccggacttctcgcaggcggccgacgatcggccggtcgcggtgacgatgccgacgcgg
cagtgcaccatcgacaaggtgacggcgctcaaacaggtgcttacccggcacccgggcacc
aaccaggtgcatctgcggttgatcagcggggagcgcgtcaccacgctggagctcgatcag
tcgcttcgggtgactccttcgtccgccctgatgggggacctcaaggcactactcggtccg
ggctgtctggggggctag
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