Entry |
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Name |
(GenBank) DNA polymerase I
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KO |
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Organism |
mmw Marinomonas sp. MWYL1
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mmw00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mmwyl1_0280
03410 Base excision repair
Mmwyl1_0280
03420 Nucleotide excision repair
Mmwyl1_0280
03440 Homologous recombination
Mmwyl1_0280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:mmw03032]
Mmwyl1_0280
03400 DNA repair and recombination proteins [BR:mmw03400]
Mmwyl1_0280
Enzymes [BR:mmw01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mmwyl1_0280
DNA replication proteins [BR:mmw03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mmwyl1_0280
DNA repair and recombination proteins [BR:mmw03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Mmwyl1_0280
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mmwyl1_0280
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(328942..331692)
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AA seq |
916 aa
MVLVDGSSYLYRAFHAIPPMHTSDGQPTNATRGVISMIRSLIKTYPDSPMVIIFDAKGKT
FRDEIYSEYKAHRPPMPDDLRPQIEPIHRVVEAMGLPLVIVDGVEADDVIGTIAKQVGEQ
GREVVVSTGDKDMAQLVTDKVTLVNTMNNTVMDIQGVKDKFGIPPELIIDYLALMGDKVD
NIPGVPGVGEKTALALLQGLGSIKDIYTRLDEIADLGFRGSKTMKQKMEDNKEMAELSYT
LATIKCDVELPFEPQELKNGEADKEKLREWFTKLEFKTWLSDLDKAPSVETASDTVGNAS
SEQNGQVEIPVKSDLEANYETVLDKASFNKWLEKIQAAELVAFDTETTSLNYMAAELVGL
SFSVEAGEAAYVPVAHDYEGAPEQLDRDWVLEQLKPWLEDDSKAKVGQHLKYDANVLNNY
QITLRGIAYDTMLESYVYNSVSSRHDMNTLASKFLGHTCVSFEDIAGKGAKQKTFNQIDL
EVAAFYAAEDADITLRLHQAIWPKIETTPELVSIFKDIECPLIPVLAKMEQTGALIDPEL
LHAQSSEIAAKLQELEIKAHEEAGESFNLSSPKQLQVILFEKQGLPVIKKTPKGQPSTAE
PILQELAQDYELPRLIMEHRSLSKLKSTYTDKLPEMIQKTGRIHTSYHQAITATGRLSST
DPNLQNIPIRSAEGRRIRQAFIAPKGYKLVAADYSQVELRIMAHLSQDSGLLDAFTKDAD
VHKATAAEVFEVSLDEVTTEQRRRAKAINFGLIYGMSAFGLAKQLGIGRPEAGKYIKRYF
ERYPGVQQYMENTREGAKEKGYVETIYGRRLYLPDIKAKNAMMRQAAERTAINAPMQGSA
ADIIKRAMIKMHDWLQGTDLDVKMIMQVHDELIFEVAEKDLEAAQKKIVDIMQNSSKIDV
PLLVEAGVGDNWDEAH |
NT seq |
2751 nt +upstreamnt +downstreamnt
atggttttggtagacggttcgtcttacctttaccgagcattccacgcgattccaccgatg
cacaccagcgatggccaaccgaccaacgccacgcgcggggtgatcagcatgatccgcagc
cttatcaaaacctaccctgattcccccatggtcatcatcttcgacgccaagggcaaaacc
ttccgcgacgagatctacagcgaatacaaagcgcaccgcccgcctatgccggacgatctt
cgcccacaaatcgagccaattcaccgtgtggtagaagccatgggcttgcctttggtcatt
gttgatggcgtggaagccgacgacgtgatcggcaccatcgccaaacaagtgggcgaacaa
ggccgtgaagtggtggtttccacgggcgataaagacatggctcagttggttaccgacaaa
gtcacccttgtgaacaccatgaacaacacggtgatggacatccaaggcgtgaaagacaag
ttcggcattccgcctgaacttattatcgattacctcgcactgatgggcgacaaagtcgat
aacatcccaggcgtaccaggcgtgggtgaaaaaaccgctcttgccttattgcaaggcttg
ggcagcatcaaagacatctacacccgcttagacgaaatcgctgatttgggcttccgtggt
tctaaaaccatgaagcaaaaaatggaagacaacaaagaaatggcggaattgtcttacacc
ttggcgaccatcaaatgcgacgtggaactgcctttcgaaccacaagaattgaaaaacggc
gaagcggacaaagaaaaactgcgcgagtggttcaccaaactcgaattcaaaacctggctg
tctgatctagataaagcaccgagcgtcgaaaccgccagcgacaccgttggcaatgcttcc
tcagagcaaaatggccaagtagaaatacctgttaaatccgatctagaagccaactacgaa
accgtcttagacaaagcaagcttcaacaaatggctagagaaaatccaagccgccgagctg
gttgccttcgataccgaaaccacctcgctgaactacatggcggcggaattggttggctta
tccttctcggtagaagcaggcgaagccgcttacgttcccgtcgcccatgattacgaaggt
gcgccagaacaactggatcgcgattgggtactagaacagctcaaaccttggttagaagac
gacagcaaagccaaagtcggccagcatctcaaatacgatgccaacgtactaaacaactac
cagatcaccttgcgtggcattgcttacgacaccatgttggaatcttatgtgtacaactcc
gtgagctctcgccacgacatgaacacattagcaagcaaattccttggccacacctgcgtc
agctttgaagacatcgcaggtaaaggcgcaaaacaaaaaaccttcaaccagatcgattta
gaagtcgccgctttctacgccgccgaagacgccgacatcaccttgcgtttgcaccaagcg
atctggccgaaaatcgaaaccacgccagaattagtcagcatttttaaagacatcgaatgc
ccattgattcccgtcttggcgaaaatggaacaaactggcgccttgattgatccagaactg
cttcatgcacaaagcagcgagatcgccgccaaactgcaagaactagaaatcaaagcccac
gaagaagcaggcgaaagcttcaacctaagctcgccaaaacaactgcaagtcatcttgttc
gaaaaacaaggcttgccggttatcaagaaaacaccaaaaggccaaccatccacggcagag
ccgatcttgcaagaactggcacaagactatgaactaccgcgtttgatcatggaacaccgc
agcctgtctaagttaaaatccacttacaccgacaaactgccagagatgatccagaaaacc
ggacggattcacacctcttaccaccaagccattaccgcgacaggccgtttgtcgtcgacc
gatccgaacttgcagaacatcccaattcgttctgccgaaggtcgtcgtattcgccaagcc
ttcatcgcgcctaaaggctacaagttagtggcggccgactactcgcaagtcgaattacgc
atcatggcgcatttgtcccaagattcgggcttattagacgcgtttactaaagacgccgac
gtgcacaaagccaccgcggcggaagtcttcgaagtcagcctagacgaggtcaccacagaa
caacgccgccgcgccaaagccatcaacttcggtttgatctacggcatgtccgcctttggt
ctagctaaacaacttggcattggtcgcccagaagcaggcaaatacatcaaacgctacttc
gaacgttacccaggcgtacagcaatacatggaaaacacccgcgaaggcgcgaaagaaaaa
ggctatgtagaaaccatctacggccgccgcttgtacctgccagacatcaaagcgaaaaac
gccatgatgcgccaagccgccgaacgcaccgcgatcaacgccccgatgcaaggctccgcc
gccgacatcatcaaacgcgccatgatcaaaatgcacgactggctacaaggcaccgaccta
gacgtgaaaatgatcatgcaagtacacgatgaactcatcttcgaagtggccgaaaaagac
ctagaggctgcacaaaagaaaatcgtcgacatcatgcaaaacagcagcaaaatcgacgtg
cctttacttgtggaagcaggtgttggggataattgggacgaggcgcattga |