Marinomonas sp. MWYL1: Mmwyl1_1455
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Entry
Mmwyl1_1455 CDS
T00567
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmw
Marinomonas sp. MWYL1
Pathway
mmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmwyl1_1455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmw03019
]
Mmwyl1_1455
03400 DNA repair and recombination proteins [BR:
mmw03400
]
Mmwyl1_1455
Enzymes [BR:
mmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mmwyl1_1455
Messenger RNA biogenesis [BR:
mmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mmwyl1_1455
DNA repair and recombination proteins [BR:
mmw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mmwyl1_1455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
TniB
AAA_22
SWI2_SNF2
FNIP_C
Cas3-like_C_2
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ABR70384
UniProt:
A6VVA5
LinkDB
All DBs
Position
complement(1625313..1627268)
Genome browser
AA seq
651 aa
AA seq
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MMPSNTAHLEHSLHSLFGFDQFREGQQQTIEQLLTGHSSLAVFPTGSGKSLCYQFTATQL
PNLTLVISPLIALMHDQLAFLTAKGIPAACLDSSQSKDESQAVMSGVQSGAIKILMISVE
RFKNERFRRFIKRVPISMLVVDEAHCISEWGHNFRPDYLKLPSYQQELAIPLVLLLTATA
TRRVQRDMAQKFAIYPEHIVQTGFYRHNLDIDLIPIQRHEKLSTLKNVLNDTQGASIVYV
TQQKTAEDVARALQADGYSAVAYHAGLNSDIRSAIQADFMNSKTRIIVATIAFGMGIDKS
DIRLVVHFDLPKSIENYSQEIGRAGRDNQPSRCVMLASLEGLSTLENFVYGDTPEPQDID
TLLRCITEQTVEYEWETQLYGLSNLTNIRSLPLKTLLVQLELFGALTPKYSFYADIKIKW
EGDRIAFANQIPTEWQAAYQAILKGIQYKKIWGTPDFDKLFNEAGLSRGDVLQVLEFAAD
HNVLTLESKGLTEVYQVHSEHFHHQTLANQLHQYVEEKQSAEVARIATMIRFFQLDRCLN
NNLARYFGDQNSPEHCGHCSVCRGKILVFSQQADLDSDVSWQDNLAEYAREFAQHVGNKS
PATQVTAILITRFLTGLTQPIFTKIKARQLSGFGAYEEKSYLSVLKAIQDL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgatgccttcaaatacagcacatctagaacactcgcttcattctttgttcggtttcgac
caatttcgtgaaggacaacagcaaaccattgaacagcttctgaccgggcactcatcgctc
gcagttttcccaacgggttctggtaaatcattgtgttaccaattcaccgccactcaactg
ccaaatttgacgctagttatctcaccattgattgccttgatgcatgatcaattagcattt
ctaaccgcaaaaggcattcccgctgcttgcttagattccagtcaaagcaaagatgaaagc
caggctgttatgtctggagtacagagtggcgctattaaaattttaatgatctcggtcgaa
cgctttaaaaacgaacgttttcgtcgctttatcaagcgcgttccgatttctatgttagtc
gtcgacgaagctcattgtatttcagaatggggtcataacttccgtccggactatctaaaa
ctaccctcttatcaacaagagttggccattccattagtcttactgttaactgctacggcg
acacgcagagtgcaaagagacatggcgcaaaagtttgccatataccctgaacatatagtg
caaacaggcttttaccgacacaacttagatattgatcttatcccaatacagcgtcatgaa
aagctaagcactttaaaaaatgtcctcaatgatacccaaggcgcgagcatagtatacgtg
actcagcagaaaacggccgaagatgtcgctcgcgctctacaagccgatggctactcagca
gtcgcctaccatgcaggcttgaatagtgatattcgcagcgctattcaagccgactttatg
aatagtaaaacacgcattatcgttgcgaccattgcgtttggcatgggcatcgacaaatct
gatattcgtttagtcgtgcattttgatttacccaaatcaatcgaaaactacagccaagaa
attggccgtgcggggcgagataaccaaccaagccgatgtgtaatgctcgccagtttggaa
ggtttaagtaccctagaaaactttgtttatggtgacacacctgagccgcaagacatcgac
actttactacgttgcattaccgagcaaacagttgaatacgaatgggaaacacaactgtac
ggattatccaatctcactaacattcgctctttaccgctcaaaaccttattggtgcagctc
gaattattcggtgcgctcacgccaaaatacagtttttacgcggatatcaaaattaaatgg
gaaggcgatagaatcgcttttgccaaccaaatcccaaccgagtggcaagctgcctaccaa
gcaattctaaaaggcatccaatacaagaaaatctggggcacacctgattttgataagcta
tttaacgaagcgggcttatcacgaggcgacgtattgcaagtcttggaattcgcagcggat
cacaatgttctgacgctagaaagcaaaggcctgactgaagtgtatcaagtccatagcgag
cattttcaccatcagacattagcaaaccaattgcatcaatatgtggaagaaaaacaaagt
gctgaagttgcacgaatcgctaccatgattcgtttctttcaattagatcgctgtttgaat
aataatctagctcgatattttggtgatcaaaattcaccagaacactgcggccattgttct
gtttgtcgaggaaaaattctggtattttcacagcaagcagacctagatagtgatgtgtcg
tggcaggataatttagcagagtacgctcgagaattcgctcaacatgttggaaacaaaagc
ccagcgactcaagtcacagcgatattgattacgcgcttcttaacgggtttaacacaaccc
attttcacaaaaataaaagcccgccaacttagcgggtttggtgcgtatgaagaaaaaagt
tatttgtcagttctaaaagcgatacaagacttataa
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