Marinomonas sp. MWYL1: Mmwyl1_1888
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Entry
Mmwyl1_1888 CDS
T00567
Name
(GenBank) H+transporting two-sector ATPase alpha/beta subunit central region
KO
K03628
transcription termination factor Rho
Organism
mmw
Marinomonas sp. MWYL1
Pathway
mmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmwyl1_1888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmw03021
]
Mmwyl1_1888
03019 Messenger RNA biogenesis [BR:
mmw03019
]
Mmwyl1_1888
Transcription machinery [BR:
mmw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Mmwyl1_1888
Messenger RNA biogenesis [BR:
mmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Mmwyl1_1888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
ABC_tran
AAA
AAA_25
AAA_19
AAA_22
AAA_16
NACHT
AAA_30
nSTAND_NTPase5
ResIII
cobW
Rad17
ATPase_2
AAA_24
nSTAND3
Spore_III_AA
NTPase_1
Viral_helicase1
AAA_17
AAA_18
RNA_helicase
NB-ARC
nSTAND_NTPase7
Motif
Other DBs
NCBI-ProteinID:
ABR70812
UniProt:
A6VWI3
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All DBs
Position
2141485..2142441
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AA seq
318 aa
AA seq
DB search
MTRKILSLKGKRSSDATPVDEVVEDLYPNDPEKRFLNGVAIHPSPCIHLASGSSQRTVRA
MDLITPIGMGQRGLIVAPPGSGKTTMLKHICQAVAEAYPEIKLYALLIDERPEEVTDFKR
SVSAEVHASSSDESYTQHVRVADALLATARKQAGEGQDVMIVIDSLTRLARVHNAEQRGS
GRTMSGGLDTRALEIPRKLFGAARKIENGGSLTILATILVDTGSKMDQVIFEEFKGTGNM
EIVLSREAASHRVFPAIDIAKSSTRREELLIDGKDLEKVRALRRSLTNLKPVDGAHKLVE
LLEEFPTNAELLKAFSPT
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaaaaatattaagtttgaaaggtaagcgatcttcagacgcgacccctgtcgat
gaggtggttgaggatttgtatccgaatgatcctgaaaaacgttttttaaacggtgtggcc
attcatccttccccttgtattcatctggcatctggttcttcacagagaacggttcgtgca
atggatttgattacgccaattggtatggggcagcgtggtctgattgttgcgccaccagga
tcaggtaaaacaaccatgttaaaacacatttgtcaggctgtggcagaagcttatcctgaa
ataaagctatatgccttgcttatcgatgaacgccctgaagaagtaacggatttcaagcgc
agcgtatcggcagaagtgcatgcgtcgtcttctgatgaaagctatacacaacatgttcgt
gtagccgatgcgctgcttgcaacagcgcgtaaacaagctggtgaaggtcaagacgtgatg
attgtgattgattcattaacaaggcttgcacgagtgcataatgccgagcagcgaggcagc
ggtcgaaccatgtctggcggacttgatacaagagcgttagaaatccctcgtaagctgttt
ggcgcagcgagaaagatagagaacggagggtcattgacgattctcgcgactattttggtg
gacactggcagtaagatggatcaggtcatctttgaagagttcaaggggactgggaatatg
gagattgttttgtcacgagaagcggcgagccatagagtttttcctgctatcgacattgcg
aaaagcagtacgcgtcgagaagaattacttattgatggaaaagatcttgagaaagtgcgt
gctttacgacgttcacttacaaaccttaagccagtagatggtgctcataagctggttgag
ttactagaagaattcccgaccaatgctgagctattgaaggctttttcaccaacttaa
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